RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 PSMB3P49720 205 aa21.02■□□□□ 0.96
SMARCD3-201ENST00000262188 MDFIQ99750 246 aa21.02■□□□□ 0.96
SMARCD3-201ENST00000262188 RPRMQ9NS64 109 aa21.02■□□□□ 0.96
SMARCD3-201ENST00000262188 TIMM9Q9Y5J7 89 aa21.02■□□□□ 0.96
SMARCD3-201ENST00000262188 WNK1Q9H4A3 2382 aa21.02■□□□□ 0.96
SMARCD3-201ENST00000262188 LINC01619G3V211 115 aa21.01■□□□□ 0.95
SMARCD3-201ENST00000262188 G3V4G9 280 aa21.01■□□□□ 0.95
SMARCD3-201ENST00000262188 SERF1AO75920 110 aa21.01■□□□□ 0.95
SMARCD3-201ENST00000262188 GPX1P07203 203 aa21.01■□□□□ 0.95
SMARCD3-201ENST00000262188 LINC00310P59036 64 aa21.01■□□□□ 0.95
SMARCD3-201ENST00000262188 WDR73Q6P4I2 378 aa21.01■□□□□ 0.95
SMARCD3-201ENST00000262188 NDUFA11Q86Y39 141 aa21.01■□□□□ 0.95
SMARCD3-201ENST00000262188 DPF1Q92782 380 aa21.01■□□□□ 0.95
SMARCD3-201ENST00000262188 UHRF2Q96PU4 802 aa21.01■□□□□ 0.95
SMARCD3-201ENST00000262188 CCL24O00175 119 aa21.01■□□□□ 0.95
SMARCD3-201ENST00000262188 SYNJ2BPP57105 145 aa21.01■□□□□ 0.95
SMARCD3-201ENST00000262188 SAMD13Q5VXD3 122 aa21.01■□□□□ 0.95
SMARCD3-201ENST00000262188 PATE2Q6UY27 113 aa21.01■□□□□ 0.95
SMARCD3-201ENST00000262188 RNF125Q96EQ8 232 aa21.01■□□□□ 0.95
SMARCD3-201ENST00000262188 SCGB2A1O75556 95 aa21■□□□□ 0.95
SMARCD3-201ENST00000262188 SELENOKQ9Y6D0 94 aa21■□□□□ 0.95
SMARCD3-201ENST00000262188 IGHV3-49A0A0A0MS15 119 aa20.99■□□□□ 0.95
SMARCD3-201ENST00000262188 WI2-2373I1.2A0A1W2PRP0 233 aa20.99■□□□□ 0.95
SMARCD3-201ENST00000262188 GAGE12BA1L429 117 aa20.99■□□□□ 0.95
SMARCD3-201ENST00000262188 FAM78BQ5VT40 261 aa20.99■□□□□ 0.95
SMARCD3-201ENST00000262188 C12orf54Q6X4T0 127 aa20.99■□□□□ 0.95
SMARCD3-201ENST00000262188 IGHV3OR16-13A0A075B7E8 117 aa20.99■□□□□ 0.95
SMARCD3-201ENST00000262188 IGHV3-74A0A0B4J1X5 117 aa20.99■□□□□ 0.95
SMARCD3-201ENST00000262188 MORN5Q5VZ52 161 aa20.99■□□□□ 0.95
SMARCD3-201ENST00000262188 C3orf56Q8N813 242 aa20.99■□□□□ 0.95
SMARCD3-201ENST00000262188 OR7C2O60412 319 aa20.98■□□□□ 0.95
SMARCD3-201ENST00000262188 SPATA31B1PQ5VZV4 182 aa20.98■□□□□ 0.95
SMARCD3-201ENST00000262188 TM4SF20Q53R12 229 aa20.97■□□□□ 0.95
SMARCD3-201ENST00000262188 DLX4Q92988 240 aaPredicted RBP20.97■□□□□ 0.95
SMARCD3-201ENST00000262188 NDUFA4O00483 81 aa20.97■□□□□ 0.95
SMARCD3-201ENST00000262188 LCN15Q6UWW0 184 aa20.97■□□□□ 0.95
SMARCD3-201ENST00000262188 BAGE3Q86Y29 109 aa20.97■□□□□ 0.95
SMARCD3-201ENST00000262188 BAGE2Q86Y30 109 aa20.97■□□□□ 0.95
SMARCD3-201ENST00000262188 IGHV3-66A0A0C4DH42 116 aa20.96■□□□□ 0.95
SMARCD3-201ENST00000262188 COX7A2P2O60397 106 aa20.96■□□□□ 0.95
SMARCD3-201ENST00000262188 APOHP02749 345 aaPredicted RBP20.96■□□□□ 0.95
SMARCD3-201ENST00000262188 CD33P20138 364 aa20.96■□□□□ 0.95
SMARCD3-201ENST00000262188 KRTDAPP60985 99 aa20.96■□□□□ 0.95
SMARCD3-201ENST00000262188 ZNF726P1Q15940 193 aa20.96■□□□□ 0.95
SMARCD3-201ENST00000262188 ZNF747Q9BV97 191 aa20.96■□□□□ 0.95
SMARCD3-201ENST00000262188 HMGB3O15347 200 aaKnown RBP20.96■□□□□ 0.95
SMARCD3-201ENST00000262188 FHL3Q13643 280 aa20.96■□□□□ 0.95
SMARCD3-201ENST00000262188 OR10J3Q5JRS4 329 aa20.96■□□□□ 0.95
SMARCD3-201ENST00000262188 GPHB5Q86YW7 130 aa20.96■□□□□ 0.95
SMARCD3-201ENST00000262188 DEFB125Q8N687 156 aa20.96■□□□□ 0.95
SMARCD3-201ENST00000262188 OR4F17Q8NGA8 305 aa20.96■□□□□ 0.95
SMARCD3-201ENST00000262188 TMEM190Q8WZ59 177 aa20.96■□□□□ 0.95
SMARCD3-201ENST00000262188 OR4F4Q96R69 305 aa20.96■□□□□ 0.95
SMARCD3-201ENST00000262188 KCNIP2Q9NS61 270 aa20.96■□□□□ 0.95
SMARCD3-201ENST00000262188 VWFP04275 2813 aa20.95■□□□□ 0.94
SMARCD3-201ENST00000262188 TAX1BP3O14907 124 aa20.95■□□□□ 0.94
SMARCD3-201ENST00000262188 KLF5Q13887 457 aaPredicted RBP20.95■□□□□ 0.94
SMARCD3-201ENST00000262188 RPP25LQ8N5L8 163 aaKnown RBP20.95■□□□□ 0.94
SMARCD3-201ENST00000262188 OR10G9Q8NGN4 311 aa20.95■□□□□ 0.94
SMARCD3-201ENST00000262188 OR10G7Q8NGN6 311 aa20.95■□□□□ 0.94
SMARCD3-201ENST00000262188 TRRAPQ9Y4A5 3859 aa20.95■□□□□ 0.94
SMARCD3-201ENST00000262188 FAM106AQ4KMX7 169 aa20.94■□□□□ 0.94
SMARCD3-201ENST00000262188 SLC25A22Q9H936 323 aa20.94■□□□□ 0.94
SMARCD3-201ENST00000262188 COX19Q49B96 90 aa20.94■□□□□ 0.94
SMARCD3-201ENST00000262188 C10orf113Q5VZT2 155 aa20.94■□□□□ 0.94
SMARCD3-201ENST00000262188 SPATA3Q8NHX4 192 aa20.94■□□□□ 0.94
SMARCD3-201ENST00000262188 TRAV5A0A0B4J249 113 aa20.93■□□□□ 0.94
SMARCD3-201ENST00000262188 SMIM17P0DL12 118 aa20.93■□□□□ 0.94
SMARCD3-201ENST00000262188 PLP1P60201 277 aa20.93■□□□□ 0.94
SMARCD3-201ENST00000262188 RHOBP62745 196 aa20.93■□□□□ 0.94
SMARCD3-201ENST00000262188 NRN1Q9NPD7 142 aa20.93■□□□□ 0.94
SMARCD3-201ENST00000262188 Q6ZVH6 145 aa20.92■□□□□ 0.94
SMARCD3-201ENST00000262188 MIR17HGQ75NE6 70 aa20.92■□□□□ 0.94
SMARCD3-201ENST00000262188 LINC00305Q7Z4B0 112 aa20.92■□□□□ 0.94
SMARCD3-201ENST00000262188 HIGD1AQ9Y241 93 aa20.92■□□□□ 0.94
SMARCD3-201ENST00000262188 RIPPLY3P57055 190 aa20.92■□□□□ 0.94
SMARCD3-201ENST00000262188 TRAV9-2A0A087WT02 112 aa20.91■□□□□ 0.94
SMARCD3-201ENST00000262188 RABAC1Q9UI14 185 aa20.91■□□□□ 0.94
SMARCD3-201ENST00000262188 KCNS1Q96KK3 526 aa20.9■□□□□ 0.94
SMARCD3-201ENST00000262188 SLC25A39Q9BZJ4 359 aaPredicted RBP20.9■□□□□ 0.94
SMARCD3-201ENST00000262188 TMEM213A2RRL7 107 aa20.9■□□□□ 0.94
SMARCD3-201ENST00000262188 FER1L6-AS1Q8NA97 138 aa20.9■□□□□ 0.94
SMARCD3-201ENST00000262188 GRIFINA4D1Z8 144 aa20.89■□□□□ 0.93
SMARCD3-201ENST00000262188 OR1L4Q8NGR5 311 aa20.89■□□□□ 0.93
SMARCD3-201ENST00000262188 PF4P02776 101 aa20.88■□□□□ 0.93
SMARCD3-201ENST00000262188 MT-ND6P03923 174 aa20.88■□□□□ 0.93
SMARCD3-201ENST00000262188 STAG3L3P0CL85 134 aa20.88■□□□□ 0.93
SMARCD3-201ENST00000262188 GATAD1Q8WUU5 269 aa20.88■□□□□ 0.93
SMARCD3-201ENST00000262188 METTL26Q96S19 204 aa20.88■□□□□ 0.93
SMARCD3-201ENST00000262188 MRPL18Q9H0U6 180 aaKnown RBP20.88■□□□□ 0.93
SMARCD3-201ENST00000262188 MYCNOSP40205 109 aa20.88■□□□□ 0.93
SMARCD3-201ENST00000262188 DAZ1Q9NQZ3 744 aaKnown RBP20.88■□□□□ 0.93
SMARCD3-201ENST00000262188 NPPCP23582 126 aa20.87■□□□□ 0.93
SMARCD3-201ENST00000262188 TRAV34A0A0B4J273 112 aa20.86■□□□□ 0.93
SMARCD3-201ENST00000262188 H3BRN7 92 aa20.86■□□□□ 0.93
SMARCD3-201ENST00000262188 CRYBB3P26998 211 aa20.86■□□□□ 0.93
SMARCD3-201ENST00000262188 ADAMTSL5Q6ZMM2 481 aa20.86■□□□□ 0.93
SMARCD3-201ENST00000262188 A0A1W2PPV4 95 aa20.86■□□□□ 0.93
SMARCD3-201ENST00000262188 LGALS9O00182 355 aa20.86■□□□□ 0.93
SMARCD3-201ENST00000262188 PDE6DO43924 150 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms