RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 DLX4Q92988 240 aaPredicted RBP3.47□□□□□ -1.85
VPS13C-202ENST00000261517 ERG28Q9UKR5 140 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 LINC00473A8K010 186 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 C17orf58Q2M2W7 97 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 LOC102724200A0A096LPH7 203 aaPredicted RBP3.47□□□□□ -1.85
VPS13C-202ENST00000261517 IGHV1-24A0A0C4DH33 117 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 GNLYP22749 145 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 CDKN1AP38936 164 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 HERV-K104P63124 156 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 C9orf66Q5T8R8 295 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 KLHL30-AS1Q8NEE0 82 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 UNC80Q8N2C7 3258 aa3.46□□□□□ -1.85
VPS13C-202ENST00000261517 TRBV25-1A0A075B6N4 114 aa3.46□□□□□ -1.85
VPS13C-202ENST00000261517 CGB1A6NKQ9 187 aa3.46□□□□□ -1.85
VPS13C-202ENST00000261517 A8MWP6 167 aa3.46□□□□□ -1.85
VPS13C-202ENST00000261517 HERVK_113P63121 156 aa3.46□□□□□ -1.85
VPS13C-202ENST00000261517 BPESC1Q9GZL8 116 aa3.46□□□□□ -1.85
VPS13C-202ENST00000261517 SAP30O75446 220 aa3.46□□□□□ -1.86
VPS13C-202ENST00000261517 Q5BKY6 102 aa3.46□□□□□ -1.86
VPS13C-202ENST00000261517 HIST3H2BBQ8N257 126 aa3.46□□□□□ -1.86
VPS13C-202ENST00000261517 SPAG8Q99932 426 aaPredicted RBP3.46□□□□□ -1.86
VPS13C-202ENST00000261517 IGHV7-4-1A0A0J9YVY3 117 aa3.46□□□□□ -1.86
VPS13C-202ENST00000261517 F8WEM9 126 aa3.46□□□□□ -1.86
VPS13C-202ENST00000261517 ADMP35318 185 aa3.46□□□□□ -1.86
VPS13C-202ENST00000261517 TRAV13-2A0A0B4J235 113 aa3.46□□□□□ -1.86
VPS13C-202ENST00000261517 NTF4P34130 210 aa3.46□□□□□ -1.86
VPS13C-202ENST00000261517 FOXL2P58012 376 aa3.46□□□□□ -1.86
VPS13C-202ENST00000261517 FAM104BQ5XKR9 115 aa3.46□□□□□ -1.86
VPS13C-202ENST00000261517 SP5Q6BEB4 398 aaPredicted RBP3.46□□□□□ -1.86
VPS13C-202ENST00000261517 LINC00469Q8N7U9 141 aa3.46□□□□□ -1.86
VPS13C-202ENST00000261517 LIME1Q9H400 295 aa3.46□□□□□ -1.86
VPS13C-202ENST00000261517 IGHV1OR15-1A0A075B7D0 117 aa3.46□□□□□ -1.86
VPS13C-202ENST00000261517 COLCA2A8K830 154 aa3.46□□□□□ -1.86
VPS13C-202ENST00000261517 PMVKQ15126 192 aa3.46□□□□□ -1.86
VPS13C-202ENST00000261517 AURKAIP1Q9NWT8 199 aaPredicted RBP3.46□□□□□ -1.86
VPS13C-202ENST00000261517 ZNHIT1O43257 154 aa3.46□□□□□ -1.86
VPS13C-202ENST00000261517 SELLP14151 372 aa3.46□□□□□ -1.86
VPS13C-202ENST00000261517 LGALS9BQ3B8N2 356 aa3.46□□□□□ -1.86
VPS13C-202ENST00000261517 LGALS9CQ6DKI2 356 aa3.46□□□□□ -1.86
VPS13C-202ENST00000261517 SPRY4Q9C004 299 aa3.46□□□□□ -1.86
VPS13C-202ENST00000261517 SPCS1Q9Y6A9 102 aa3.46□□□□□ -1.86
VPS13C-202ENST00000261517 TNCP24821 2201 aa3.46□□□□□ -1.86
VPS13C-202ENST00000261517 IGHV3OR16-12A0A075B7B8 117 aa3.46□□□□□ -1.86
VPS13C-202ENST00000261517 IGKV1D-8A0A087WSZ0 117 aa3.46□□□□□ -1.86
VPS13C-202ENST00000261517 A0A087X0K7 114 aa3.46□□□□□ -1.86
VPS13C-202ENST00000261517 IFITM1P13164 125 aa3.46□□□□□ -1.86
VPS13C-202ENST00000261517 REG4Q9BYZ8 158 aa3.46□□□□□ -1.86
VPS13C-202ENST00000261517 C11orf68Q9H3H3 251 aaKnown RBP3.46□□□□□ -1.86
VPS13C-202ENST00000261517 FAM215AQ9Y5M1 114 aa3.46□□□□□ -1.86
VPS13C-202ENST00000261517 SYS1-DBNDD2H3BUS1 97 aa3.46□□□□□ -1.86
VPS13C-202ENST00000261517 KLF5Q13887 457 aaPredicted RBP3.46□□□□□ -1.86
VPS13C-202ENST00000261517 ZNF815PA8K554 130 aa3.45□□□□□ -1.86
VPS13C-202ENST00000261517 PKD1L2Q7Z442 2459 aa3.45□□□□□ -1.86
VPS13C-202ENST00000261517 SMAD7O15105 426 aaKnown RBP3.45□□□□□ -1.86
VPS13C-202ENST00000261517 NPSP0C0P6 89 aa3.45□□□□□ -1.86
VPS13C-202ENST00000261517 AZU1P20160 251 aa3.45□□□□□ -1.86
VPS13C-202ENST00000261517 PAX9P55771 341 aa3.45□□□□□ -1.86
VPS13C-202ENST00000261517 KLRD1Q13241 179 aa3.45□□□□□ -1.86
VPS13C-202ENST00000261517 CHCHD5Q9BSY4 110 aa3.45□□□□□ -1.86
VPS13C-202ENST00000261517 MEX3AA1L020 520 aaKnown RBP3.45□□□□□ -1.86
VPS13C-202ENST00000261517 OR13C6PQ8NH95 151 aa3.45□□□□□ -1.86
VPS13C-202ENST00000261517 UBE2E2Q96LR5 201 aa3.45□□□□□ -1.86
VPS13C-202ENST00000261517 RNASE7Q9H1E1 156 aaKnown RBP3.45□□□□□ -1.86
VPS13C-202ENST00000261517 DAZ2Q13117 558 aaKnown RBP3.45□□□□□ -1.86
VPS13C-202ENST00000261517 DAZ4Q86SG3 579 aaKnown RBP3.45□□□□□ -1.86
VPS13C-202ENST00000261517 HIST1H2BLQ99880 126 aa3.45□□□□□ -1.86
VPS13C-202ENST00000261517 DAZ3Q9NR90 486 aaKnown RBP3.45□□□□□ -1.86
VPS13C-202ENST00000261517 LTAP01374 205 aa3.45□□□□□ -1.86
VPS13C-202ENST00000261517 UTF1Q5T230 341 aa3.45□□□□□ -1.86
VPS13C-202ENST00000261517 CXCL5P42830 114 aa3.45□□□□□ -1.86
VPS13C-202ENST00000261517 RPL32P62910 135 aaKnown RBP3.45□□□□□ -1.86
VPS13C-202ENST00000261517 LYZL1Q6UWQ5 148 aa3.45□□□□□ -1.86
VPS13C-202ENST00000261517 TMEM243Q9BU79 118 aa3.45□□□□□ -1.86
VPS13C-202ENST00000261517 CRYBA4P53673 196 aa3.45□□□□□ -1.86
VPS13C-202ENST00000261517 GPHB5Q86YW7 130 aa3.45□□□□□ -1.86
VPS13C-202ENST00000261517 C3orf56Q8N813 242 aa3.45□□□□□ -1.86
VPS13C-202ENST00000261517 TIMM21Q9BVV7 248 aa3.45□□□□□ -1.86
VPS13C-202ENST00000261517 SCRT1Q9BWW7 348 aa3.45□□□□□ -1.86
VPS13C-202ENST00000261517 FAM201AQ5SY85 155 aa3.45□□□□□ -1.86
VPS13C-202ENST00000261517 C16orf74Q96GX8 76 aa3.45□□□□□ -1.86
VPS13C-202ENST00000261517 GRIFINA4D1Z8 144 aa3.45□□□□□ -1.86
VPS13C-202ENST00000261517 MST1LQ2TV78 715 aa3.45□□□□□ -1.86
VPS13C-202ENST00000261517 ZMAT4Q9H898 229 aa3.45□□□□□ -1.86
VPS13C-202ENST00000261517 CDK2AP2O75956 126 aa3.44□□□□□ -1.86
VPS13C-202ENST00000261517 ABCA2Q9BZC7 2435 aa3.44□□□□□ -1.86
VPS13C-202ENST00000261517 CD5LO43866 347 aa3.44□□□□□ -1.86
VPS13C-202ENST00000261517 PYYP10082 97 aa3.44□□□□□ -1.86
VPS13C-202ENST00000261517 HOXB4P17483 251 aaPredicted RBP3.44□□□□□ -1.86
VPS13C-202ENST00000261517 D6R8Y8 96 aa3.44□□□□□ -1.86
VPS13C-202ENST00000261517 C8orf86Q6ZUL3 223 aa3.44□□□□□ -1.86
VPS13C-202ENST00000261517 GSN-AS1Q9NRJ2 163 aa3.44□□□□□ -1.86
VPS13C-202ENST00000261517 MTORP42345 2549 aa3.44□□□□□ -1.86
VPS13C-202ENST00000261517 CRYGCP07315 174 aa3.44□□□□□ -1.86
VPS13C-202ENST00000261517 CTAG1AP78358 180 aa3.44□□□□□ -1.86
VPS13C-202ENST00000261517 H7C423 109 aa3.44□□□□□ -1.86
VPS13C-202ENST00000261517 MYCNOSP40205 109 aa3.44□□□□□ -1.86
VPS13C-202ENST00000261517 CSTL1Q9H114 145 aa3.44□□□□□ -1.86
VPS13C-202ENST00000261517 MEGF9Q9H1U4 602 aa3.44□□□□□ -1.86
VPS13C-202ENST00000261517 LSM4Q9Y4Z0 139 aaKnown RBP3.44□□□□□ -1.86
VPS13C-202ENST00000261517 PRR20EP86478 221 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms