RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 CLEC3BP05452 202 aa12.67□□□□□ -0.38
SNCAIP-202ENST00000261368 RIPPLY3P57055 190 aa12.67□□□□□ -0.38
SNCAIP-202ENST00000261368 CLEC19AQ6UXS0 136 aa12.67□□□□□ -0.38
SNCAIP-202ENST00000261368 MAP1AP78559 2803 aaPredicted RBP12.67□□□□□ -0.38
SNCAIP-202ENST00000261368 KIR3DS1Q14943 382 aa12.66□□□□□ -0.38
SNCAIP-202ENST00000261368 LINC00527Q9UJ94 153 aa12.66□□□□□ -0.38
SNCAIP-202ENST00000261368 ZNF80P51504 273 aaPredicted RBP12.66□□□□□ -0.38
SNCAIP-202ENST00000261368 IGHV3OR16-10A0A075B7F0 116 aa12.66□□□□□ -0.38
SNCAIP-202ENST00000261368 C15orf32Q32M92 178 aa12.66□□□□□ -0.38
SNCAIP-202ENST00000261368 FABP5P3A8MUU1 101 aa12.65□□□□□ -0.38
SNCAIP-202ENST00000261368 CCDC144NLQ6NUI1 221 aa12.65□□□□□ -0.38
SNCAIP-202ENST00000261368 FANCD2OSQ96PS1 177 aa12.65□□□□□ -0.38
SNCAIP-202ENST00000261368 RNF5Q99942 180 aa12.65□□□□□ -0.38
SNCAIP-202ENST00000261368 MEGF9Q9H1U4 602 aa12.65□□□□□ -0.38
SNCAIP-202ENST00000261368 SPANXN1Q5VSR9 72 aa12.65□□□□□ -0.38
SNCAIP-202ENST00000261368 VMO1Q7Z5L0 202 aa12.65□□□□□ -0.38
SNCAIP-202ENST00000261368 GTSCR1Q86UQ5 136 aa12.65□□□□□ -0.38
SNCAIP-202ENST00000261368 SMAD7O15105 426 aaKnown RBP12.64□□□□□ -0.39
SNCAIP-202ENST00000261368 SEC11AP67812 179 aa12.64□□□□□ -0.39
SNCAIP-202ENST00000261368 CSMD1Q96PZ7 3565 aa12.64□□□□□ -0.39
SNCAIP-202ENST00000261368 K7EMI3 77 aa12.64□□□□□ -0.39
SNCAIP-202ENST00000261368 RPS20P60866 119 aaKnown RBP12.64□□□□□ -0.39
SNCAIP-202ENST00000261368 ZNF562Q6V9R5 426 aa12.64□□□□□ -0.39
SNCAIP-202ENST00000261368 GOSR1O95249 250 aa12.64□□□□□ -0.39
SNCAIP-202ENST00000261368 PDE6HQ13956 83 aa12.64□□□□□ -0.39
SNCAIP-202ENST00000261368 VKORC1Q9BQB6 163 aa12.64□□□□□ -0.39
SNCAIP-202ENST00000261368 CHD8Q9HCK8 2581 aa12.63□□□□□ -0.39
SNCAIP-202ENST00000261368 A0A0G2JLM5 398 aa12.63□□□□□ -0.39
SNCAIP-202ENST00000261368 PRAC2D3DTV9 90 aa12.63□□□□□ -0.39
SNCAIP-202ENST00000261368 SAP30O75446 220 aa12.63□□□□□ -0.39
SNCAIP-202ENST00000261368 IL17RELQ6ZVW7 336 aa12.63□□□□□ -0.39
SNCAIP-202ENST00000261368 DEFB104AQ8WTQ1 72 aa12.63□□□□□ -0.39
SNCAIP-202ENST00000261368 COL25A1Q9BXS0 654 aaPredicted RBP12.63□□□□□ -0.39
SNCAIP-202ENST00000261368 SPRY2O43597 315 aa12.63□□□□□ -0.39
SNCAIP-202ENST00000261368 NDUFS7O75251 213 aa12.63□□□□□ -0.39
SNCAIP-202ENST00000261368 GAS8-AS1O95177 125 aa12.63□□□□□ -0.39
SNCAIP-202ENST00000261368 SCGB2A2Q13296 93 aa12.63□□□□□ -0.39
SNCAIP-202ENST00000261368 TMEM78Q5T7P6 136 aa12.63□□□□□ -0.39
SNCAIP-202ENST00000261368 C2orf91Q6ZV80 131 aa12.63□□□□□ -0.39
SNCAIP-202ENST00000261368 DYNAPQ8N1N2 210 aa12.63□□□□□ -0.39
SNCAIP-202ENST00000261368 SPCS1Q9Y6A9 102 aa12.63□□□□□ -0.39
SNCAIP-202ENST00000261368 RELNP78509 3460 aa12.63□□□□□ -0.39
SNCAIP-202ENST00000261368 TRAV26-2A0A0B4J265 109 aa12.63□□□□□ -0.39
SNCAIP-202ENST00000261368 WI2-2373I1.2A0A1W2PRP0 233 aa12.62□□□□□ -0.39
SNCAIP-202ENST00000261368 S100A4P26447 101 aaKnown RBP12.62□□□□□ -0.39
SNCAIP-202ENST00000261368 CDKN1BP46527 198 aa12.62□□□□□ -0.39
SNCAIP-202ENST00000261368 OR2K2Q8NGT1 345 aa12.62□□□□□ -0.39
SNCAIP-202ENST00000261368 IGLV11-55A0A075B6I3 123 aa12.62□□□□□ -0.39
SNCAIP-202ENST00000261368 K7EP13 123 aa12.62□□□□□ -0.39
SNCAIP-202ENST00000261368 CSPG4Q6UVK1 2322 aa12.62□□□□□ -0.39
SNCAIP-202ENST00000261368 G3V318 75 aa12.62□□□□□ -0.39
SNCAIP-202ENST00000261368 TMEM158Q8WZ71 300 aa12.62□□□□□ -0.39
SNCAIP-202ENST00000261368 DOPEY2Q9Y3R5 2298 aa12.61□□□□□ -0.39
SNCAIP-202ENST00000261368 TNFRSF6BO95407 300 aa12.61□□□□□ -0.39
SNCAIP-202ENST00000261368 HSD52Q0P140 79 aa12.61□□□□□ -0.39
SNCAIP-202ENST00000261368 IGF2-ASQ6U949 168 aa12.61□□□□□ -0.39
SNCAIP-202ENST00000261368 LGALS9BQ3B8N2 356 aa12.61□□□□□ -0.39
SNCAIP-202ENST00000261368 LGALS9CQ6DKI2 356 aa12.61□□□□□ -0.39
SNCAIP-202ENST00000261368 CTSGP08311 255 aa12.61□□□□□ -0.39
SNCAIP-202ENST00000261368 PRTN3P24158 256 aa12.61□□□□□ -0.39
SNCAIP-202ENST00000261368 SRSF8Q9BRL6 282 aaKnown RBP12.61□□□□□ -0.39
SNCAIP-202ENST00000261368 JKAMPQ9P055 326 aa12.61□□□□□ -0.39
SNCAIP-202ENST00000261368 SPTBN4Q9H254 2564 aa12.6□□□□□ -0.39
SNCAIP-202ENST00000261368 A0A096LNJ9 63 aa12.6□□□□□ -0.39
SNCAIP-202ENST00000261368 FABP2P12104 132 aa12.6□□□□□ -0.39
SNCAIP-202ENST00000261368 MYOZ3Q8TDC0 251 aa12.6□□□□□ -0.39
SNCAIP-202ENST00000261368 UBTD1Q9HAC8 227 aa12.6□□□□□ -0.39
SNCAIP-202ENST00000261368 NHP2Q9NX24 153 aaKnown RBP12.6□□□□□ -0.39
SNCAIP-202ENST00000261368 NOTCH3Q9UM47 2321 aa12.6□□□□□ -0.39
SNCAIP-202ENST00000261368 ASH1LQ9NR48 2969 aaKnown RBP12.6□□□□□ -0.39
SNCAIP-202ENST00000261368 M0R381 172 aa12.6□□□□□ -0.39
SNCAIP-202ENST00000261368 ZC2HC1BQ5TFG8 222 aa12.6□□□□□ -0.39
SNCAIP-202ENST00000261368 C16orf92Q96LL3 132 aa12.6□□□□□ -0.39
SNCAIP-202ENST00000261368 LY6LH3BQJ8 138 aa12.59□□□□□ -0.39
SNCAIP-202ENST00000261368 NDUFA3O95167 84 aa12.59□□□□□ -0.39
SNCAIP-202ENST00000261368 TMEM219Q86XT9 240 aa12.59□□□□□ -0.39
SNCAIP-202ENST00000261368 CFHR4Q92496 578 aa12.59□□□□□ -0.39
SNCAIP-202ENST00000261368 K7ERJ3 54 aa12.59□□□□□ -0.39
SNCAIP-202ENST00000261368 SMIM13P0DJ93 91 aa12.58□□□□□ -0.4
SNCAIP-202ENST00000261368 HOXB4P17483 251 aaPredicted RBP12.58□□□□□ -0.4
SNCAIP-202ENST00000261368 MGPP08493 103 aa12.58□□□□□ -0.4
SNCAIP-202ENST00000261368 OR9G4Q8NGQ1 327 aa12.58□□□□□ -0.4
SNCAIP-202ENST00000261368 C9orf118A6NHY6 69 aa12.58□□□□□ -0.4
SNCAIP-202ENST00000261368 H3BVH4 76 aa12.58□□□□□ -0.4
SNCAIP-202ENST00000261368 MRPS12O15235 138 aaKnown RBP12.58□□□□□ -0.4
SNCAIP-202ENST00000261368 ZNF493Q6ZR52 646 aa12.58□□□□□ -0.4
SNCAIP-202ENST00000261368 OR4X2Q8NGF9 303 aa12.58□□□□□ -0.4
SNCAIP-202ENST00000261368 METTL26Q96S19 204 aa12.58□□□□□ -0.4
SNCAIP-202ENST00000261368 ATP6V0E1O15342 81 aa12.57□□□□□ -0.4
SNCAIP-202ENST00000261368 IGKCP01834 107 aa12.57□□□□□ -0.4
SNCAIP-202ENST00000261368 OR1N2Q8NGR9 330 aa12.57□□□□□ -0.4
SNCAIP-202ENST00000261368 TRAV40A0A0B4J280 105 aa12.57□□□□□ -0.4
SNCAIP-202ENST00000261368 TRBV6-1A0A0K0K1D8 114 aa12.57□□□□□ -0.4
SNCAIP-202ENST00000261368 DTX2Q86UW9 622 aa12.57□□□□□ -0.4
SNCAIP-202ENST00000261368 OR11H6Q8NGC7 330 aa12.57□□□□□ -0.4
SNCAIP-202ENST00000261368 GLMPQ8WWB7 406 aa12.57□□□□□ -0.4
SNCAIP-202ENST00000261368 TRGV3P03979 118 aa12.56□□□□□ -0.4
SNCAIP-202ENST00000261368 NXT2Q9NPJ8 142 aaKnown RBP12.56□□□□□ -0.4
SNCAIP-202ENST00000261368 SMAD5-AS1Q9Y6J3 95 aa12.56□□□□□ -0.4
SNCAIP-202ENST00000261368 SORL1Q92673 2214 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms