RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 IGKV2D-40P01614 121 aaPredicted RBP13.56□□□□□ -0.24
SSB-201ENST00000260956 RAB9AP51151 201 aa13.56□□□□□ -0.24
SSB-201ENST00000260956 OR2D3Q8NGH3 330 aa13.56□□□□□ -0.24
SSB-201ENST00000260956 SSBP4Q9BWG4 385 aaPredicted RBP13.56□□□□□ -0.24
SSB-201ENST00000260956 A0A1W2PS18 150 aa13.55□□□□□ -0.24
SSB-201ENST00000260956 FBLL1A6NHQ2 334 aaKnown RBP13.55□□□□□ -0.24
SSB-201ENST00000260956 HAX1O00165 279 aa13.55□□□□□ -0.24
SSB-201ENST00000260956 GPX1P07203 203 aa13.55□□□□□ -0.24
SSB-201ENST00000260956 HLA-DMBP28068 263 aa13.55□□□□□ -0.24
SSB-201ENST00000260956 C9orf152Q5JTZ5 239 aa13.55□□□□□ -0.24
SSB-201ENST00000260956 ZNF664Q8N3J9 261 aa13.55□□□□□ -0.24
SSB-201ENST00000260956 DAZAP1Q96EP5 407 aaKnown RBP13.55□□□□□ -0.24
SSB-201ENST00000260956 PGLYRP4Q96LB8 373 aa13.55□□□□□ -0.24
SSB-201ENST00000260956 H3BUX3 64 aa13.54□□□□□ -0.24
SSB-201ENST00000260956 S100A7P31151 101 aa13.54□□□□□ -0.24
SSB-201ENST00000260956 ATP5G2Q06055 141 aa13.54□□□□□ -0.24
SSB-201ENST00000260956 IQCJQ1A5X6 159 aa13.54□□□□□ -0.24
SSB-201ENST00000260956 C1orf194Q5T5A4 169 aa13.54□□□□□ -0.24
SSB-201ENST00000260956 Q8N976 141 aa13.54□□□□□ -0.24
SSB-201ENST00000260956 ESM1Q9NQ30 184 aa13.54□□□□□ -0.24
SSB-201ENST00000260956 H3BUA1 57 aa13.53□□□□□ -0.24
SSB-201ENST00000260956 CFHR3Q02985 330 aa13.53□□□□□ -0.24
SSB-201ENST00000260956 C9orf139Q6ZV77 190 aa13.53□□□□□ -0.24
SSB-201ENST00000260956 ZNF575Q86XF7 245 aa13.53□□□□□ -0.24
SSB-201ENST00000260956 URB1-AS1Q96HZ7 61 aa13.53□□□□□ -0.24
SSB-201ENST00000260956 PRR25Q96S07 402 aa13.53□□□□□ -0.24
SSB-201ENST00000260956 ZNF580Q9UK33 172 aa13.53□□□□□ -0.24
SSB-201ENST00000260956 CAMPP49913 170 aa13.53□□□□□ -0.24
SSB-201ENST00000260956 NIT1Q86X76 327 aa13.53□□□□□ -0.24
SSB-201ENST00000260956 VGLL1Q99990 258 aa13.53□□□□□ -0.24
SSB-201ENST00000260956 NAGKQ9UJ70 344 aa13.53□□□□□ -0.24
SSB-201ENST00000260956 LINC00527Q9UJ94 153 aa13.53□□□□□ -0.24
SSB-201ENST00000260956 TENM1Q9UKZ4 2725 aa13.52□□□□□ -0.24
SSB-201ENST00000260956 TRAV8-2A0A0B4J237 113 aa13.52□□□□□ -0.25
SSB-201ENST00000260956 ZNF324O75467 553 aaPredicted RBP13.52□□□□□ -0.25
SSB-201ENST00000260956 CD33P20138 364 aa13.52□□□□□ -0.25
SSB-201ENST00000260956 CSN1S1P47710 185 aa13.52□□□□□ -0.25
SSB-201ENST00000260956 LY6EQ16553 131 aa13.52□□□□□ -0.25
SSB-201ENST00000260956 DEFB112Q30KQ8 113 aa13.52□□□□□ -0.25
SSB-201ENST00000260956 IGFL4Q6B9Z1 124 aa13.52□□□□□ -0.25
SSB-201ENST00000260956 Q6ZS46 218 aa13.52□□□□□ -0.25
SSB-201ENST00000260956 TEX29Q8N6K0 151 aa13.52□□□□□ -0.25
SSB-201ENST00000260956 SIGLECL1Q8N7X8 197 aa13.52□□□□□ -0.25
SSB-201ENST00000260956 KIR2DL5BA0A0G2JN68 375 aa13.51□□□□□ -0.25
SSB-201ENST00000260956 KIR2DL5BA0A0G2JPC4 375 aa13.51□□□□□ -0.25
SSB-201ENST00000260956 M0QZK8 103 aa13.51□□□□□ -0.25
SSB-201ENST00000260956 RELQ04864 619 aaPredicted RBP13.51□□□□□ -0.25
SSB-201ENST00000260956 KIR2DL5AQ8N109 375 aa13.51□□□□□ -0.25
SSB-201ENST00000260956 PRO1933Q9H354 126 aa13.51□□□□□ -0.25
SSB-201ENST00000260956 DNHD1Q96M86 4753 aa13.51□□□□□ -0.25
SSB-201ENST00000260956 PRAC2D3DTV9 90 aa13.5□□□□□ -0.25
SSB-201ENST00000260956 SH2D1AO60880 128 aa13.5□□□□□ -0.25
SSB-201ENST00000260956 IGLV1-40P01703 118 aa13.5□□□□□ -0.25
SSB-201ENST00000260956 TRGV3P03979 118 aa13.5□□□□□ -0.25
SSB-201ENST00000260956 LCN12Q6JVE5 192 aa13.5□□□□□ -0.25
SSB-201ENST00000260956 TEX43Q6ZNM6 134 aa13.5□□□□□ -0.25
SSB-201ENST00000260956 GLMPQ8WWB7 406 aa13.5□□□□□ -0.25
SSB-201ENST00000260956 DUX5Q96PT3 197 aa13.5□□□□□ -0.25
SSB-201ENST00000260956 LOC102724200A0A096LPH7 203 aaPredicted RBP13.5□□□□□ -0.25
SSB-201ENST00000260956 RBAKDNA6NC62 111 aa13.5□□□□□ -0.25
SSB-201ENST00000260956 ZNF705FA8MVS1 300 aaPredicted RBP13.5□□□□□ -0.25
SSB-201ENST00000260956 TRBV12-3P01733 135 aa13.5□□□□□ -0.25
SSB-201ENST00000260956 ARMS2P0C7Q2 107 aa13.5□□□□□ -0.25
SSB-201ENST00000260956 DDTP30046 118 aa13.5□□□□□ -0.25
SSB-201ENST00000260956 ZNF80P51504 273 aaPredicted RBP13.5□□□□□ -0.25
SSB-201ENST00000260956 PRR31Q5SQ13 230 aa13.5□□□□□ -0.25
SSB-201ENST00000260956 SAPCD1Q5SSQ6 148 aa13.5□□□□□ -0.25
SSB-201ENST00000260956 Q8TAT8 98 aa13.5□□□□□ -0.25
SSB-201ENST00000260956 SLC50A1Q9BRV3 221 aa13.5□□□□□ -0.25
SSB-201ENST00000260956 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.49□□□□□ -0.25
SSB-201ENST00000260956 A0A1B0GUT8 65 aa13.49□□□□□ -0.25
SSB-201ENST00000260956 BLCAPP62952 87 aa13.49□□□□□ -0.25
SSB-201ENST00000260956 Q6AWC8 147 aa13.49□□□□□ -0.25
SSB-201ENST00000260956 MRPL53Q96EL3 112 aaKnown RBP13.49□□□□□ -0.25
SSB-201ENST00000260956 METTL26Q96S19 204 aa13.49□□□□□ -0.25
SSB-201ENST00000260956 NRN1Q9NPD7 142 aa13.49□□□□□ -0.25
SSB-201ENST00000260956 TSTD3H0UI37 97 aa13.48□□□□□ -0.25
SSB-201ENST00000260956 HILS1P60008 231 aa13.48□□□□□ -0.25
SSB-201ENST00000260956 SAMD10Q9BYL1 202 aa13.48□□□□□ -0.25
SSB-201ENST00000260956 STAB1Q9NY15 2570 aa13.48□□□□□ -0.25
SSB-201ENST00000260956 AMTP48728 403 aa13.47□□□□□ -0.25
SSB-201ENST00000260956 FAM162BQ5T6X4 162 aa13.47□□□□□ -0.25
SSB-201ENST00000260956 MDFIQ99750 246 aa13.47□□□□□ -0.25
SSB-201ENST00000260956 KLK15Q9H2R5 256 aa13.47□□□□□ -0.25
SSB-201ENST00000260956 IGHV3-66A0A0C4DH42 116 aa13.47□□□□□ -0.25
SSB-201ENST00000260956 TCF21O43680 179 aa13.47□□□□□ -0.25
SSB-201ENST00000260956 CT45A10P0DMU9 189 aa13.47□□□□□ -0.25
SSB-201ENST00000260956 CTRLP40313 264 aa13.47□□□□□ -0.25
SSB-201ENST00000260956 UNQ9165/PRO28630Q6UXU0 137 aa13.47□□□□□ -0.25
SSB-201ENST00000260956 GPHB5Q86YW7 130 aa13.47□□□□□ -0.25
SSB-201ENST00000260956 RNF182Q8N6D2 247 aa13.47□□□□□ -0.25
SSB-201ENST00000260956 C14orf144Q96I85 54 aa13.47□□□□□ -0.25
SSB-201ENST00000260956 USMG5Q96IX5 58 aa13.47□□□□□ -0.25
SSB-201ENST00000260956 NDFIP1Q9BT67 221 aa13.47□□□□□ -0.25
SSB-201ENST00000260956 A0A1B0GW15 77 aa13.46□□□□□ -0.25
SSB-201ENST00000260956 NDUFA4O00483 81 aa13.46□□□□□ -0.25
SSB-201ENST00000260956 ZNF207O43670 478 aaKnown RBP13.46□□□□□ -0.25
SSB-201ENST00000260956 SCGB1D1O95968 90 aa13.46□□□□□ -0.25
SSB-201ENST00000260956 ARL3P36405 182 aa13.46□□□□□ -0.25
SSB-201ENST00000260956 ZNF493Q6ZR52 646 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms