RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 BTN1A1Q13410 526 aa13.23□□□□□ -0.29
TM6SF1-201ENST00000258909 MIR17HGQ75NE6 70 aa13.23□□□□□ -0.29
TM6SF1-201ENST00000258909 ENKURQ8TC29 256 aa13.23□□□□□ -0.29
TM6SF1-201ENST00000258909 MRPL53Q96EL3 112 aaKnown RBP13.23□□□□□ -0.29
TM6SF1-201ENST00000258909 AGPAT4-IT1Q9H0P7 198 aa13.23□□□□□ -0.29
TM6SF1-201ENST00000258909 C7orf71A4D174 169 aa13.22□□□□□ -0.29
TM6SF1-201ENST00000258909 SLC25A5P05141 298 aaKnown RBP13.22□□□□□ -0.29
TM6SF1-201ENST00000258909 C6orf223Q8N319 242 aa13.22□□□□□ -0.29
TM6SF1-201ENST00000258909 S100ZQ8WXG8 99 aa13.22□□□□□ -0.29
TM6SF1-201ENST00000258909 TMPRSS5Q9H3S3 457 aa13.22□□□□□ -0.29
TM6SF1-201ENST00000258909 GSN-AS1Q9NRJ2 163 aa13.22□□□□□ -0.29
TM6SF1-201ENST00000258909 IGKV2-40A0A087WW87 121 aaPredicted RBP13.21□□□□□ -0.3
TM6SF1-201ENST00000258909 H0YIZ8 118 aa13.21□□□□□ -0.3
TM6SF1-201ENST00000258909 IGKV2D-40P01614 121 aaPredicted RBP13.21□□□□□ -0.3
TM6SF1-201ENST00000258909 RNASE4P34096 147 aaKnown RBP13.21□□□□□ -0.3
TM6SF1-201ENST00000258909 ICAM4Q14773 271 aa13.21□□□□□ -0.3
TM6SF1-201ENST00000258909 FAM122CQ6P4D5 195 aa13.21□□□□□ -0.3
TM6SF1-201ENST00000258909 LINC00299Q6ZSB3 139 aa13.21□□□□□ -0.3
TM6SF1-201ENST00000258909 RXFP4Q8TDU9 374 aa13.21□□□□□ -0.3
TM6SF1-201ENST00000258909 FAM167A-AS1Q96KT0 104 aa13.21□□□□□ -0.3
TM6SF1-201ENST00000258909 PRELID1Q9Y255 219 aa13.21□□□□□ -0.3
TM6SF1-201ENST00000258909 KLLNB2CW77 178 aa13.2□□□□□ -0.3
TM6SF1-201ENST00000258909 E5RGE8 158 aa13.2□□□□□ -0.3
TM6SF1-201ENST00000258909 PDE6HQ13956 83 aa13.2□□□□□ -0.3
TM6SF1-201ENST00000258909 FAM19A4Q96LR4 140 aa13.2□□□□□ -0.3
TM6SF1-201ENST00000258909 LINC00477Q96M19 166 aa13.2□□□□□ -0.3
TM6SF1-201ENST00000258909 SLC25A31Q9H0C2 315 aa13.2□□□□□ -0.3
TM6SF1-201ENST00000258909 AAMDCQ9H7C9 122 aa13.2□□□□□ -0.3
TM6SF1-201ENST00000258909 Q9H8V8 135 aa13.2□□□□□ -0.3
TM6SF1-201ENST00000258909 ZNF324O75467 553 aaPredicted RBP13.19□□□□□ -0.3
TM6SF1-201ENST00000258909 UPK1BO75841 260 aa13.19□□□□□ -0.3
TM6SF1-201ENST00000258909 IFITM3Q01628 133 aa13.19□□□□□ -0.3
TM6SF1-201ENST00000258909 DAZ2Q13117 558 aaKnown RBP13.19□□□□□ -0.3
TM6SF1-201ENST00000258909 Q6ZQT7 251 aa13.19□□□□□ -0.3
TM6SF1-201ENST00000258909 C11orf72Q8NBR9 251 aa13.19□□□□□ -0.3
TM6SF1-201ENST00000258909 VGLL1Q99990 258 aa13.19□□□□□ -0.3
TM6SF1-201ENST00000258909 LRP1BQ9NZR2 4599 aa13.18□□□□□ -0.3
TM6SF1-201ENST00000258909 GPX1P07203 203 aa13.18□□□□□ -0.3
TM6SF1-201ENST00000258909 OR10J4P0C629 311 aa13.18□□□□□ -0.3
TM6SF1-201ENST00000258909 NBEAP1P0C6P0 100 aa13.18□□□□□ -0.3
TM6SF1-201ENST00000258909 ESRGQ1W209 222 aa13.18□□□□□ -0.3
TM6SF1-201ENST00000258909 PRR9Q5T870 116 aa13.18□□□□□ -0.3
TM6SF1-201ENST00000258909 NMES1Q9C002 83 aa13.18□□□□□ -0.3
TM6SF1-201ENST00000258909 OR51M1Q9H341 326 aa13.18□□□□□ -0.3
TM6SF1-201ENST00000258909 TRGV2A0A075B6R0 118 aa13.17□□□□□ -0.3
TM6SF1-201ENST00000258909 C9orf47Q6ZRZ4 202 aa13.17□□□□□ -0.3
TM6SF1-201ENST00000258909 EIF4E3Q8N5X7 224 aaKnown RBP13.17□□□□□ -0.3
TM6SF1-201ENST00000258909 ZNF503Q96F45 646 aa13.17□□□□□ -0.3
TM6SF1-201ENST00000258909 KRTAP1-5Q9BYS1 174 aa13.17□□□□□ -0.3
TM6SF1-201ENST00000258909 WDR61Q9GZS3 305 aaKnown RBP13.17□□□□□ -0.3
TM6SF1-201ENST00000258909 KLF12Q9Y4X4 402 aa13.17□□□□□ -0.3
TM6SF1-201ENST00000258909 TRGV1A0A0A0MS02 117 aa13.16□□□□□ -0.3
TM6SF1-201ENST00000258909 INMT-MINDY4F8WBC2 141 aa13.16□□□□□ -0.3
TM6SF1-201ENST00000258909 TMEM78Q5T7P6 136 aa13.16□□□□□ -0.3
TM6SF1-201ENST00000258909 ZNF680Q8NEM1 530 aa13.16□□□□□ -0.3
TM6SF1-201ENST00000258909 FXYD5Q96DB9 178 aa13.16□□□□□ -0.3
TM6SF1-201ENST00000258909 TP53TG3Q9ULZ0 132 aa13.16□□□□□ -0.3
TM6SF1-201ENST00000258909 HSPG2P98160 4391 aa13.16□□□□□ -0.3
TM6SF1-201ENST00000258909 CRISP2P16562 243 aa13.16□□□□□ -0.3
TM6SF1-201ENST00000258909 ZFAND2AQ8N6M9 145 aa13.16□□□□□ -0.3
TM6SF1-201ENST00000258909 PHYHIPLQ96FC7 376 aa13.16□□□□□ -0.3
TM6SF1-201ENST00000258909 VSIG2Q96IQ7 327 aa13.16□□□□□ -0.3
TM6SF1-201ENST00000258909 PAXXQ9BUH6 204 aa13.16□□□□□ -0.3
TM6SF1-201ENST00000258909 FUT9Q9Y231 359 aa13.16□□□□□ -0.3
TM6SF1-201ENST00000258909 C16orf90A8MZG2 172 aa13.15□□□□□ -0.3
TM6SF1-201ENST00000258909 H2BFSP57053 126 aa13.15□□□□□ -0.3
TM6SF1-201ENST00000258909 ANXA2RQ3ZCQ2 193 aa13.15□□□□□ -0.3
TM6SF1-201ENST00000258909 Q8TAT8 98 aa13.15□□□□□ -0.3
TM6SF1-201ENST00000258909 LINC00467Q9BRT7 94 aa13.15□□□□□ -0.3
TM6SF1-201ENST00000258909 ZNF492Q9P255 531 aa13.15□□□□□ -0.3
TM6SF1-201ENST00000258909 H3BNG1 76 aa13.14□□□□□ -0.31
TM6SF1-201ENST00000258909 RGS13O14921 159 aa13.14□□□□□ -0.31
TM6SF1-201ENST00000258909 PRAF2O60831 178 aa13.14□□□□□ -0.31
TM6SF1-201ENST00000258909 PPP1R1CQ8WVI7 109 aa13.14□□□□□ -0.31
TM6SF1-201ENST00000258909 MRPL32Q9BYC8 188 aaKnown RBP13.14□□□□□ -0.31
TM6SF1-201ENST00000258909 A0A096LPF7 62 aa13.13□□□□□ -0.31
TM6SF1-201ENST00000258909 OR7C2O60412 319 aa13.13□□□□□ -0.31
TM6SF1-201ENST00000258909 EIF3GO75821 320 aaKnown RBP eCLIP13.13□□□□□ -0.31
TM6SF1-201ENST00000258909 IGHV3-53P01767 116 aa13.13□□□□□ -0.31
TM6SF1-201ENST00000258909 TCL1AP56279 114 aa13.13□□□□□ -0.31
TM6SF1-201ENST00000258909 RANP62826 216 aaKnown RBP13.13□□□□□ -0.31
TM6SF1-201ENST00000258909 CYCSP99999 105 aaKnown RBP13.13□□□□□ -0.31
TM6SF1-201ENST00000258909 KCNIP2Q9NS61 270 aa13.13□□□□□ -0.31
TM6SF1-201ENST00000258909 MRPL16Q9NX20 251 aaKnown RBP13.13□□□□□ -0.31
TM6SF1-201ENST00000258909 C17orf112F2Z3M2 114 aa13.12□□□□□ -0.31
TM6SF1-201ENST00000258909 SPINK4O60575 86 aa13.12□□□□□ -0.31
TM6SF1-201ENST00000258909 ATP5SQ99766 215 aa13.12□□□□□ -0.31
TM6SF1-201ENST00000258909 UPK3BQ9BT76 320 aa13.12□□□□□ -0.31
TM6SF1-201ENST00000258909 SMIM3Q9BZL3 60 aa13.12□□□□□ -0.31
TM6SF1-201ENST00000258909 MRPS16Q9Y3D3 137 aaKnown RBP13.12□□□□□ -0.31
TM6SF1-201ENST00000258909 IGHV1OR15-1A0A075B7D0 117 aa13.11□□□□□ -0.31
TM6SF1-201ENST00000258909 NMBP08949 121 aa13.11□□□□□ -0.31
TM6SF1-201ENST00000258909 ZNF138P52744 262 aa13.11□□□□□ -0.31
TM6SF1-201ENST00000258909 FFAR4Q5NUL3 377 aa13.11□□□□□ -0.31
TM6SF1-201ENST00000258909 C18orf15Q96N68 181 aa13.11□□□□□ -0.31
TM6SF1-201ENST00000258909 KRTAP4-5Q9BYR2 181 aa13.11□□□□□ -0.31
TM6SF1-201ENST00000258909 Q9H3A6 140 aa13.11□□□□□ -0.31
TM6SF1-201ENST00000258909 A6NHS1 94 aa13.1□□□□□ -0.31
TM6SF1-201ENST00000258909 SSNA1O43805 119 aa13.1□□□□□ -0.31
TM6SF1-201ENST00000258909 TTC32Q5I0X7 151 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms