RNA–Protein interactions for RNA: ENST00000257765.9

KHDC1-201, Transcript of KH domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KHDC1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-201ENST00000257765 FAM19A4Q96LR4 140 aa12.63□□□□□ -0.39
KHDC1-201ENST00000257765 SLC39A9Q9NUM3 307 aa12.63□□□□□ -0.39
KHDC1-201ENST00000257765 PRELID1Q9Y255 219 aa12.63□□□□□ -0.39
KHDC1-201ENST00000257765 KLF12Q9Y4X4 402 aa12.63□□□□□ -0.39
KHDC1-201ENST00000257765 UBE2L5PA0A1B0GUS4 154 aa12.62□□□□□ -0.39
KHDC1-201ENST00000257765 MPDU1O75352 247 aa12.62□□□□□ -0.39
KHDC1-201ENST00000257765 RNASE4P34096 147 aaKnown RBP12.62□□□□□ -0.39
KHDC1-201ENST00000257765 FUSP35637 526 aaKnown RBP eCLIP12.62□□□□□ -0.39
KHDC1-201ENST00000257765 RPL29P47914 159 aaKnown RBP12.62□□□□□ -0.39
KHDC1-201ENST00000257765 CNPY1Q3B7I2 92 aa12.62□□□□□ -0.39
KHDC1-201ENST00000257765 IBA57Q5T440 356 aaKnown RBP12.62□□□□□ -0.39
KHDC1-201ENST00000257765 LINC00477Q96M19 166 aa12.62□□□□□ -0.39
KHDC1-201ENST00000257765 TMEM14CQ9P0S9 112 aa12.62□□□□□ -0.39
KHDC1-201ENST00000257765 FAT1Q14517 4588 aa12.61□□□□□ -0.39
KHDC1-201ENST00000257765 FAM24AA6NFZ4 105 aa12.61□□□□□ -0.39
KHDC1-201ENST00000257765 NDUFB4O95168 129 aa12.61□□□□□ -0.39
KHDC1-201ENST00000257765 IGHV3-53P01767 116 aa12.61□□□□□ -0.39
KHDC1-201ENST00000257765 CRISP2P16562 243 aa12.61□□□□□ -0.39
KHDC1-201ENST00000257765 BAXQ07812 192 aa12.61□□□□□ -0.39
KHDC1-201ENST00000257765 PDE6HQ13956 83 aa12.61□□□□□ -0.39
KHDC1-201ENST00000257765 VWC2Q2TAL6 325 aa12.61□□□□□ -0.39
KHDC1-201ENST00000257765 LYPD1Q8N2G4 141 aa12.61□□□□□ -0.39
KHDC1-201ENST00000257765 AGPAT4-IT1Q9H0P7 198 aa12.61□□□□□ -0.39
KHDC1-201ENST00000257765 C20orf85Q9H1P6 137 aa12.61□□□□□ -0.39
KHDC1-201ENST00000257765 PRO0255Q9UI72 69 aa12.61□□□□□ -0.39
KHDC1-201ENST00000257765 TIMM9Q9Y5J7 89 aa12.61□□□□□ -0.39
KHDC1-201ENST00000257765 FAM25EA8MYX2 175 aa12.6□□□□□ -0.39
KHDC1-201ENST00000257765 RGS13O14921 159 aa12.6□□□□□ -0.39
KHDC1-201ENST00000257765 GPX1P07203 203 aa12.6□□□□□ -0.39
KHDC1-201ENST00000257765 INAFM2P0DMQ5 153 aa12.6□□□□□ -0.39
KHDC1-201ENST00000257765 HIST1H1EP10412 219 aaKnown RBP12.6□□□□□ -0.39
KHDC1-201ENST00000257765 NFE4Q86UQ8 179 aa12.6□□□□□ -0.39
KHDC1-201ENST00000257765 SDHCQ99643 169 aaPredicted RBP12.6□□□□□ -0.39
KHDC1-201ENST00000257765 C11orf1Q9H5F2 150 aa12.6□□□□□ -0.39
KHDC1-201ENST00000257765 MRPL16Q9NX20 251 aaKnown RBP12.6□□□□□ -0.39
KHDC1-201ENST00000257765 TNFRSF18Q9Y5U5 241 aa12.6□□□□□ -0.39
KHDC1-201ENST00000257765 PYYP10082 97 aa12.59□□□□□ -0.39
KHDC1-201ENST00000257765 PVALBP20472 110 aaPredicted RBP12.59□□□□□ -0.39
KHDC1-201ENST00000257765 XGP55808 180 aa12.59□□□□□ -0.39
KHDC1-201ENST00000257765 SLAQ13239 276 aa12.59□□□□□ -0.39
KHDC1-201ENST00000257765 C9orf47Q6ZRZ4 202 aa12.59□□□□□ -0.39
KHDC1-201ENST00000257765 EXOC3-AS1Q8N2X6 119 aa12.59□□□□□ -0.39
KHDC1-201ENST00000257765 BLNKQ8WV28 456 aa12.59□□□□□ -0.39
KHDC1-201ENST00000257765 VGLL1Q99990 258 aa12.59□□□□□ -0.39
KHDC1-201ENST00000257765 ARPC5LQ9BPX5 153 aa12.59□□□□□ -0.39
KHDC1-201ENST00000257765 AAMDCQ9H7C9 122 aa12.59□□□□□ -0.39
KHDC1-201ENST00000257765 DMBT1Q9UGM3 2413 aaPredicted RBP12.58□□□□□ -0.4
KHDC1-201ENST00000257765 NMBP08949 121 aa12.58□□□□□ -0.4
KHDC1-201ENST00000257765 DNAH10OSP0CZ25 163 aa12.58□□□□□ -0.4
KHDC1-201ENST00000257765 SULT1A1P50225 295 aa12.58□□□□□ -0.4
KHDC1-201ENST00000257765 CRYBA4P53673 196 aa12.58□□□□□ -0.4
KHDC1-201ENST00000257765 MRPL23Q16540 153 aaKnown RBP12.58□□□□□ -0.4
KHDC1-201ENST00000257765 TMEM78Q5T7P6 136 aa12.58□□□□□ -0.4
KHDC1-201ENST00000257765 PRR9Q5T870 116 aa12.58□□□□□ -0.4
KHDC1-201ENST00000257765 Q5VSD8 79 aa12.58□□□□□ -0.4
KHDC1-201ENST00000257765 LYPD5Q6UWN5 251 aa12.58□□□□□ -0.4
KHDC1-201ENST00000257765 ZFAND2AQ8N6M9 145 aa12.58□□□□□ -0.4
KHDC1-201ENST00000257765 RBM38Q9H0Z9 239 aaKnown RBP12.58□□□□□ -0.4
KHDC1-201ENST00000257765 TP53TG3Q9ULZ0 132 aa12.58□□□□□ -0.4
KHDC1-201ENST00000257765 IGHV1OR15-1A0A075B7D0 117 aa12.57□□□□□ -0.4
KHDC1-201ENST00000257765 IGKV2-40A0A087WW87 121 aaPredicted RBP12.57□□□□□ -0.4
KHDC1-201ENST00000257765 C5orf51A6NDU8 294 aa12.57□□□□□ -0.4
KHDC1-201ENST00000257765 IFNA5P01569 189 aa12.57□□□□□ -0.4
KHDC1-201ENST00000257765 IGKV2D-40P01614 121 aaPredicted RBP12.57□□□□□ -0.4
KHDC1-201ENST00000257765 IL7P13232 177 aa12.57□□□□□ -0.4
KHDC1-201ENST00000257765 FGF7P21781 194 aa12.57□□□□□ -0.4
KHDC1-201ENST00000257765 S100A11P31949 105 aa12.57□□□□□ -0.4
KHDC1-201ENST00000257765 HBG1P69891 147 aa12.57□□□□□ -0.4
KHDC1-201ENST00000257765 HBG2P69892 147 aa12.57□□□□□ -0.4
KHDC1-201ENST00000257765 STX12Q86Y82 276 aa12.57□□□□□ -0.4
KHDC1-201ENST00000257765 CHAC2Q8WUX2 184 aa12.57□□□□□ -0.4
KHDC1-201ENST00000257765 FRZBQ92765 325 aa12.57□□□□□ -0.4
KHDC1-201ENST00000257765 C8orf49Q96NF6 230 aa12.57□□□□□ -0.4
KHDC1-201ENST00000257765 LYRM2Q9NU23 88 aaPredicted RBP12.57□□□□□ -0.4
KHDC1-201ENST00000257765 HHLA3Q9XRX5 114 aa12.57□□□□□ -0.4
KHDC1-201ENST00000257765 LY96Q9Y6Y9 160 aa12.57□□□□□ -0.4
KHDC1-201ENST00000257765 TRAV9-2A0A087WT02 112 aa12.56□□□□□ -0.4
KHDC1-201ENST00000257765 A0A087WTM6 91 aa12.56□□□□□ -0.4
KHDC1-201ENST00000257765 IGSF23A1L1A6 192 aa12.56□□□□□ -0.4
KHDC1-201ENST00000257765 S100A10P60903 97 aa12.56□□□□□ -0.4
KHDC1-201ENST00000257765 ZNF415Q09FC8 603 aa12.56□□□□□ -0.4
KHDC1-201ENST00000257765 ICAM4Q14773 271 aa12.56□□□□□ -0.4
KHDC1-201ENST00000257765 FAM122CQ6P4D5 195 aa12.56□□□□□ -0.4
KHDC1-201ENST00000257765 NEGR1Q7Z3B1 354 aa12.56□□□□□ -0.4
KHDC1-201ENST00000257765 C2orf50Q96LR7 162 aa12.56□□□□□ -0.4
KHDC1-201ENST00000257765 PRAF2O60831 178 aa12.55□□□□□ -0.4
KHDC1-201ENST00000257765 KRTAP10-1P60331 282 aa12.55□□□□□ -0.4
KHDC1-201ENST00000257765 FHL2Q14192 279 aa12.55□□□□□ -0.4
KHDC1-201ENST00000257765 Q6ZQT7 251 aa12.55□□□□□ -0.4
KHDC1-201ENST00000257765 TMEM252Q8N6L7 170 aa12.55□□□□□ -0.4
KHDC1-201ENST00000257765 ZNF492Q9P255 531 aa12.55□□□□□ -0.4
KHDC1-201ENST00000257765 ATP6V1FQ16864 119 aa12.54□□□□□ -0.4
KHDC1-201ENST00000257765 GCSAMLQ5JQS6 135 aa12.54□□□□□ -0.4
KHDC1-201ENST00000257765 SEC22CQ9BRL7 303 aa12.54□□□□□ -0.4
KHDC1-201ENST00000257765 SLC25A2Q9BXI2 301 aa12.54□□□□□ -0.4
KHDC1-201ENST00000257765 GPN1Q9HCN4 374 aaPredicted RBP12.54□□□□□ -0.4
KHDC1-201ENST00000257765 MSRB1Q9NZV6 116 aa12.54□□□□□ -0.4
KHDC1-201ENST00000257765 TRAV6A0A075B6T7 132 aa12.53□□□□□ -0.4
KHDC1-201ENST00000257765 TRGV4A0A0C4DH28 118 aa12.53□□□□□ -0.4
KHDC1-201ENST00000257765 LYRM1O43325 122 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms