RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 A0A096LPE4 126 aa5.37□□□□□ -1.55
PDGFRA-201ENST00000257290 A0A1W2PPZ6 126 aa5.37□□□□□ -1.55
PDGFRA-201ENST00000257290 A8MZ25 164 aa5.37□□□□□ -1.55
PDGFRA-201ENST00000257290 ARMS2P0C7Q2 107 aa5.37□□□□□ -1.55
PDGFRA-201ENST00000257290 SDIM1Q6ZPB5 146 aa5.37□□□□□ -1.55
PDGFRA-201ENST00000257290 C5orf38Q86SI9 138 aa5.37□□□□□ -1.55
PDGFRA-201ENST00000257290 SUMO2P61956 95 aaKnown RBP5.37□□□□□ -1.55
PDGFRA-201ENST00000257290 ZNF503Q96F45 646 aa5.37□□□□□ -1.55
PDGFRA-201ENST00000257290 TRAV23DV6A0A075B6W5 121 aa5.37□□□□□ -1.55
PDGFRA-201ENST00000257290 M0R1W7 72 aa5.37□□□□□ -1.55
PDGFRA-201ENST00000257290 SPINK14Q6IE38 97 aa5.37□□□□□ -1.55
PDGFRA-201ENST00000257290 LINC00336Q6ZUF6 198 aa5.37□□□□□ -1.55
PDGFRA-201ENST00000257290 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.37□□□□□ -1.55
PDGFRA-201ENST00000257290 PRSS12P56730 875 aa5.37□□□□□ -1.55
PDGFRA-201ENST00000257290 NSUN5P1Q3KNT7 163 aa5.37□□□□□ -1.55
PDGFRA-201ENST00000257290 TRAV12-1A0A0B4J245 112 aa5.36□□□□□ -1.55
PDGFRA-201ENST00000257290 M0R1B8 84 aa5.36□□□□□ -1.55
PDGFRA-201ENST00000257290 WFDC9Q8NEX5 89 aa5.36□□□□□ -1.55
PDGFRA-201ENST00000257290 ANKRD36A6QL64 1941 aa5.36□□□□□ -1.55
PDGFRA-201ENST00000257290 CACNA1DQ01668 2161 aa5.36□□□□□ -1.55
PDGFRA-201ENST00000257290 IGKV3D-11A0A0A0MRZ8 115 aa5.36□□□□□ -1.55
PDGFRA-201ENST00000257290 PLAC8L1A1L4L8 177 aa5.36□□□□□ -1.55
PDGFRA-201ENST00000257290 H3BS24 57 aa5.36□□□□□ -1.55
PDGFRA-201ENST00000257290 P0DMU3 169 aa5.36□□□□□ -1.55
PDGFRA-201ENST00000257290 FAM231AP0DMU4 169 aa5.36□□□□□ -1.55
PDGFRA-201ENST00000257290 FAM231CP0DMU5 169 aa5.36□□□□□ -1.55
PDGFRA-201ENST00000257290 NFE4Q86UQ8 179 aa5.36□□□□□ -1.55
PDGFRA-201ENST00000257290 A0A087WV48 116 aa5.36□□□□□ -1.55
PDGFRA-201ENST00000257290 IGKV3-11P04433 115 aa5.36□□□□□ -1.55
PDGFRA-201ENST00000257290 GATA1P15976 413 aaPredicted RBP5.36□□□□□ -1.55
PDGFRA-201ENST00000257290 UBE2E1P51965 193 aa5.36□□□□□ -1.55
PDGFRA-201ENST00000257290 PCOLCEQ15113 449 aa5.36□□□□□ -1.55
PDGFRA-201ENST00000257290 GFRALQ6UXV0 394 aa5.36□□□□□ -1.55
PDGFRA-201ENST00000257290 IGHV3-64A0A075B6Q5 118 aa5.35□□□□□ -1.55
PDGFRA-201ENST00000257290 PRR32B1ATL7 298 aa5.35□□□□□ -1.55
PDGFRA-201ENST00000257290 PAX4O43316 350 aa5.35□□□□□ -1.55
PDGFRA-201ENST00000257290 PHLDA1Q8WV24 401 aaPredicted RBP5.35□□□□□ -1.55
PDGFRA-201ENST00000257290 IGF2BP2-AS1Q96M15 143 aa5.35□□□□□ -1.55
PDGFRA-201ENST00000257290 TTTY12Q9BZ98 90 aa5.35□□□□□ -1.55
PDGFRA-201ENST00000257290 IGKV1D-13A0A0B4J2D9 117 aa5.35□□□□□ -1.55
PDGFRA-201ENST00000257290 IGKV1-13P0DP09 117 aa5.35□□□□□ -1.55
PDGFRA-201ENST00000257290 APOC4P55056 127 aa5.35□□□□□ -1.55
PDGFRA-201ENST00000257290 LYPD6Q86Y78 171 aa5.35□□□□□ -1.55
PDGFRA-201ENST00000257290 PLPPR2Q96GM1 343 aa5.35□□□□□ -1.55
PDGFRA-201ENST00000257290 SMKR1H3BMG3 65 aa5.35□□□□□ -1.55
PDGFRA-201ENST00000257290 LEPROTO15243 131 aa5.35□□□□□ -1.55
PDGFRA-201ENST00000257290 NPPCP23582 126 aa5.35□□□□□ -1.55
PDGFRA-201ENST00000257290 RPL11P62913 178 aaKnown RBP5.35□□□□□ -1.55
PDGFRA-201ENST00000257290 TMEM133Q9H2Q1 129 aa5.35□□□□□ -1.55
PDGFRA-201ENST00000257290 DOCK8Q8NF50 2099 aa5.35□□□□□ -1.55
PDGFRA-201ENST00000257290 BLCAPP62952 87 aa5.35□□□□□ -1.55
PDGFRA-201ENST00000257290 HEATR5AQ86XA9 2040 aa5.35□□□□□ -1.55
PDGFRA-201ENST00000257290 GP9P14770 177 aa5.35□□□□□ -1.55
PDGFRA-201ENST00000257290 TET1Q8NFU7 2136 aa5.35□□□□□ -1.55
PDGFRA-201ENST00000257290 IGHV1-58A0A0C4DH39 117 aa5.34□□□□□ -1.55
PDGFRA-201ENST00000257290 ZNF32P17041 273 aa5.34□□□□□ -1.55
PDGFRA-201ENST00000257290 QRFPP83859 136 aa5.34□□□□□ -1.55
PDGFRA-201ENST00000257290 TMEM105Q8N8V8 129 aa5.34□□□□□ -1.55
PDGFRA-201ENST00000257290 TIMM21Q9BVV7 248 aa5.34□□□□□ -1.55
PDGFRA-201ENST00000257290 MRPL51Q4U2R6 128 aaKnown RBP5.34□□□□□ -1.55
PDGFRA-201ENST00000257290 ZNF329Q86UD4 541 aa5.34□□□□□ -1.55
PDGFRA-201ENST00000257290 DPH3P1Q9H4G8 78 aa5.34□□□□□ -1.55
PDGFRA-201ENST00000257290 TRBV7-1A0A0A6YYK4 115 aa5.34□□□□□ -1.55
PDGFRA-201ENST00000257290 SNRNP200O75643 2136 aaKnown RBP5.34□□□□□ -1.55
PDGFRA-201ENST00000257290 SOSTDC1Q6X4U4 206 aa5.34□□□□□ -1.55
PDGFRA-201ENST00000257290 J3QT63 122 aa5.34□□□□□ -1.55
PDGFRA-201ENST00000257290 WISP1O95388 367 aa5.34□□□□□ -1.55
PDGFRA-201ENST00000257290 C17orf82Q86X59 251 aaPredicted RBP5.34□□□□□ -1.55
PDGFRA-201ENST00000257290 KIAA0100Q14667 2235 aaKnown RBP5.34□□□□□ -1.55
PDGFRA-201ENST00000257290 PTPRDP23468 1912 aa5.34□□□□□ -1.55
PDGFRA-201ENST00000257290 NHLRC4P0CG21 123 aaPredicted RBP5.34□□□□□ -1.56
PDGFRA-201ENST00000257290 LINC00310P59036 64 aa5.34□□□□□ -1.56
PDGFRA-201ENST00000257290 GREB1Q4ZG55 1949 aa5.34□□□□□ -1.56
PDGFRA-201ENST00000257290 IGLV3-12A0A075B6K2 115 aa5.33□□□□□ -1.56
PDGFRA-201ENST00000257290 M0R381 172 aa5.33□□□□□ -1.56
PDGFRA-201ENST00000257290 SAA4P35542 130 aa5.33□□□□□ -1.56
PDGFRA-201ENST00000257290 UBE2E2Q96LR5 201 aa5.33□□□□□ -1.56
PDGFRA-201ENST00000257290 TRGV8A0A0C4DH27 118 aa5.33□□□□□ -1.56
PDGFRA-201ENST00000257290 INS-IGF2F8WCM5 200 aa5.33□□□□□ -1.56
PDGFRA-201ENST00000257290 F8WEM9 126 aa5.33□□□□□ -1.56
PDGFRA-201ENST00000257290 TMEM141Q96I45 108 aa5.33□□□□□ -1.56
PDGFRA-201ENST00000257290 CHKB-CPT1BH3BT56 60 aa5.33□□□□□ -1.56
PDGFRA-201ENST00000257290 TMEM256-PLSCR3K7ERE1 68 aa5.33□□□□□ -1.56
PDGFRA-201ENST00000257290 BEAN1Q3B7T3 259 aa5.33□□□□□ -1.56
PDGFRA-201ENST00000257290 SRXN1Q9BYN0 137 aa5.33□□□□□ -1.56
PDGFRA-201ENST00000257290 IGKV1D-42A0A075B6H8 117 aa5.33□□□□□ -1.56
PDGFRA-201ENST00000257290 TRBV7-6A0A0J9YX20 115 aa5.33□□□□□ -1.56
PDGFRA-201ENST00000257290 A6NED7 52 aa5.33□□□□□ -1.56
PDGFRA-201ENST00000257290 LINC01619G3V211 115 aa5.33□□□□□ -1.56
PDGFRA-201ENST00000257290 FRMD6-AS1P0C7T7 363 aa5.33□□□□□ -1.56
PDGFRA-201ENST00000257290 FOXF2Q12947 444 aa5.33□□□□□ -1.56
PDGFRA-201ENST00000257290 ASPHD1Q5U4P2 390 aa5.33□□□□□ -1.56
PDGFRA-201ENST00000257290 NTN3O00634 580 aaPredicted RBP5.32□□□□□ -1.56
PDGFRA-201ENST00000257290 IGKV1-5P01602 117 aa5.32□□□□□ -1.56
PDGFRA-201ENST00000257290 SAA1P0DJI8 122 aaPredicted RBP5.32□□□□□ -1.56
PDGFRA-201ENST00000257290 LOC101059948A0A1B0GTJ6 334 aa5.32□□□□□ -1.56
PDGFRA-201ENST00000257290 MRPL14Q6P1L8 145 aaKnown RBP5.32□□□□□ -1.56
PDGFRA-201ENST00000257290 Q86TA4 180 aa5.32□□□□□ -1.56
PDGFRA-201ENST00000257290 C17orf98A8MV24 154 aa5.32□□□□□ -1.56
PDGFRA-201ENST00000257290 LINC00311Q8N616 119 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms