RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 GDF5OSQ5U4N7 250 aa14.41□□□□□ -0.1
TRIM47-201ENST00000254816 PRNTQ86SH4 94 aa14.41□□□□□ -0.1
TRIM47-201ENST00000254816 NEU1Q99519 415 aa14.41□□□□□ -0.1
TRIM47-201ENST00000254816 SAMD10Q9BYL1 202 aa14.41□□□□□ -0.1
TRIM47-201ENST00000254816 A0A087X0K7 114 aa14.41□□□□□ -0.1
TRIM47-201ENST00000254816 ZNF705FA8MVS1 300 aaPredicted RBP14.41□□□□□ -0.1
TRIM47-201ENST00000254816 APCSP02743 223 aa14.41□□□□□ -0.1
TRIM47-201ENST00000254816 LGALS1P09382 135 aaKnown RBP14.41□□□□□ -0.1
TRIM47-201ENST00000254816 ESDP10768 282 aa14.41□□□□□ -0.1
TRIM47-201ENST00000254816 RNF152Q8N8N0 203 aa14.41□□□□□ -0.1
TRIM47-201ENST00000254816 GLMPQ8WWB7 406 aa14.41□□□□□ -0.1
TRIM47-201ENST00000254816 UBE2E2Q96LR5 201 aa14.41□□□□□ -0.1
TRIM47-201ENST00000254816 IGHV4OR15-8A0A075B7B6 117 aa14.4□□□□□ -0.1
TRIM47-201ENST00000254816 A0A087WW49 117 aa14.4□□□□□ -0.1
TRIM47-201ENST00000254816 HIGD1CA8MV81 97 aa14.4□□□□□ -0.1
TRIM47-201ENST00000254816 RNF182Q8N6D2 247 aa14.4□□□□□ -0.1
TRIM47-201ENST00000254816 MLST8Q9BVC4 326 aa14.4□□□□□ -0.1
TRIM47-201ENST00000254816 HIVEP2P31629 2446 aa14.4□□□□□ -0.1
TRIM47-201ENST00000254816 A8MWP6 167 aa14.4□□□□□ -0.1
TRIM47-201ENST00000254816 LTAP01374 205 aa14.4□□□□□ -0.1
TRIM47-201ENST00000254816 PAFAH1B2P68402 229 aa14.4□□□□□ -0.1
TRIM47-201ENST00000254816 COX19Q49B96 90 aa14.4□□□□□ -0.1
TRIM47-201ENST00000254816 TCTEX1D4Q5JR98 221 aa14.4□□□□□ -0.1
TRIM47-201ENST00000254816 TCF24Q7RTU0 167 aa14.4□□□□□ -0.1
TRIM47-201ENST00000254816 REC114Q7Z4M0 266 aa14.4□□□□□ -0.1
TRIM47-201ENST00000254816 Q86TA4 180 aa14.4□□□□□ -0.1
TRIM47-201ENST00000254816 TSKUQ8WUA8 353 aa14.4□□□□□ -0.1
TRIM47-201ENST00000254816 ZNF705DP0CH99 300 aaPredicted RBP14.39□□□□□ -0.11
TRIM47-201ENST00000254816 ZNF705BP0CI00 300 aaPredicted RBP14.39□□□□□ -0.11
TRIM47-201ENST00000254816 FAM106AQ4KMX7 169 aa14.39□□□□□ -0.11
TRIM47-201ENST00000254816 IGKV2-40A0A087WW87 121 aaPredicted RBP14.39□□□□□ -0.11
TRIM47-201ENST00000254816 IGHV7-4-1A0A0J9YVY3 117 aa14.39□□□□□ -0.11
TRIM47-201ENST00000254816 ZNF253O75346 499 aa14.39□□□□□ -0.11
TRIM47-201ENST00000254816 IGKV2D-40P01614 121 aaPredicted RBP14.39□□□□□ -0.11
TRIM47-201ENST00000254816 CAMPP49913 170 aa14.39□□□□□ -0.11
TRIM47-201ENST00000254816 DEFB136Q30KP8 78 aa14.39□□□□□ -0.11
TRIM47-201ENST00000254816 GPHB5Q86YW7 130 aa14.39□□□□□ -0.11
TRIM47-201ENST00000254816 SSBP4Q9BWG4 385 aaPredicted RBP14.39□□□□□ -0.11
TRIM47-201ENST00000254816 DAZ1Q9NQZ3 744 aaKnown RBP14.39□□□□□ -0.11
TRIM47-201ENST00000254816 RNF114Q9Y508 228 aa14.39□□□□□ -0.11
TRIM47-201ENST00000254816 CHEK1O14757 476 aa14.38□□□□□ -0.11
TRIM47-201ENST00000254816 RNASE1P07998 156 aaKnown RBP14.38□□□□□ -0.11
TRIM47-201ENST00000254816 CSN1S1P47710 185 aa14.38□□□□□ -0.11
TRIM47-201ENST00000254816 SCGB2A2Q13296 93 aa14.38□□□□□ -0.11
TRIM47-201ENST00000254816 KHDC1LQ5JSQ8 128 aa14.38□□□□□ -0.11
TRIM47-201ENST00000254816 C8orf86Q6ZUL3 223 aa14.38□□□□□ -0.11
TRIM47-201ENST00000254816 ZNF418Q8TF45 676 aaPredicted RBP14.38□□□□□ -0.11
TRIM47-201ENST00000254816 RPP21Q9H633 154 aaKnown RBP14.38□□□□□ -0.11
TRIM47-201ENST00000254816 PSG3Q16557 428 aa14.38□□□□□ -0.11
TRIM47-201ENST00000254816 TMEM75Q8N9X5 138 aa14.38□□□□□ -0.11
TRIM47-201ENST00000254816 RHPN1-AS1Q9BWJ2 59 aa14.38□□□□□ -0.11
TRIM47-201ENST00000254816 TRAV8-2A0A0B4J237 113 aa14.37□□□□□ -0.11
TRIM47-201ENST00000254816 OR10J3Q5JRS4 329 aa14.37□□□□□ -0.11
TRIM47-201ENST00000254816 WIPF2Q8TF74 440 aaPredicted RBP14.37□□□□□ -0.11
TRIM47-201ENST00000254816 PSG8Q9UQ74 426 aa14.37□□□□□ -0.11
TRIM47-201ENST00000254816 IGKV3-7A0A075B6H7 116 aa14.36□□□□□ -0.11
TRIM47-201ENST00000254816 INAFM1C9JVW0 142 aa14.36□□□□□ -0.11
TRIM47-201ENST00000254816 K7EQM0 130 aa14.36□□□□□ -0.11
TRIM47-201ENST00000254816 PMCHP20382 165 aa14.36□□□□□ -0.11
TRIM47-201ENST00000254816 LCN12Q6JVE5 192 aa14.36□□□□□ -0.11
TRIM47-201ENST00000254816 PRAC2D3DTV9 90 aa14.36□□□□□ -0.11
TRIM47-201ENST00000254816 P01737 135 aa14.36□□□□□ -0.11
TRIM47-201ENST00000254816 SYNJ2BPP57105 145 aa14.36□□□□□ -0.11
TRIM47-201ENST00000254816 HILS1P60008 231 aa14.36□□□□□ -0.11
TRIM47-201ENST00000254816 RPL11P62913 178 aaKnown RBP14.36□□□□□ -0.11
TRIM47-201ENST00000254816 C11orf44Q8N8P7 122 aa14.36□□□□□ -0.11
TRIM47-201ENST00000254816 SMIM12Q96EX1 92 aa14.36□□□□□ -0.11
TRIM47-201ENST00000254816 KCNS1Q96KK3 526 aa14.36□□□□□ -0.11
TRIM47-201ENST00000254816 A0A1W2PS18 150 aa14.35□□□□□ -0.11
TRIM47-201ENST00000254816 C19orf71A6NCJ1 209 aa14.35□□□□□ -0.11
TRIM47-201ENST00000254816 GPX1P07203 203 aa14.35□□□□□ -0.11
TRIM47-201ENST00000254816 HOXD3P31249 432 aaPredicted RBP14.35□□□□□ -0.11
TRIM47-201ENST00000254816 DUX3Q96PT4 197 aa14.35□□□□□ -0.11
TRIM47-201ENST00000254816 SLC50A1Q9BRV3 221 aa14.35□□□□□ -0.11
TRIM47-201ENST00000254816 SMPXQ9UHP9 88 aa14.35□□□□□ -0.11
TRIM47-201ENST00000254816 AMTP48728 403 aa14.35□□□□□ -0.11
TRIM47-201ENST00000254816 TDRG1Q3Y452 100 aa14.35□□□□□ -0.11
TRIM47-201ENST00000254816 GTSF1Q8WW33 167 aa14.35□□□□□ -0.11
TRIM47-201ENST00000254816 VGLL1Q99990 258 aa14.35□□□□□ -0.11
TRIM47-201ENST00000254816 K7EMT4 169 aa14.34□□□□□ -0.11
TRIM47-201ENST00000254816 RASL11AQ6T310 242 aa14.34□□□□□ -0.11
TRIM47-201ENST00000254816 PGLYRP4Q96LB8 373 aa14.34□□□□□ -0.11
TRIM47-201ENST00000254816 C16orf92Q96LL3 132 aa14.34□□□□□ -0.11
TRIM47-201ENST00000254816 UFC1Q9Y3C8 167 aa14.34□□□□□ -0.11
TRIM47-201ENST00000254816 TMEM213A2RRL7 107 aa14.34□□□□□ -0.11
TRIM47-201ENST00000254816 KRTDAPP60985 99 aa14.34□□□□□ -0.11
TRIM47-201ENST00000254816 FAM19A2Q8N3H0 131 aa14.34□□□□□ -0.11
TRIM47-201ENST00000254816 OR2D3Q8NGH3 330 aa14.34□□□□□ -0.11
TRIM47-201ENST00000254816 C18orf32Q8TCD1 76 aa14.34□□□□□ -0.11
TRIM47-201ENST00000254816 DAZAP1Q96EP5 407 aaKnown RBP14.34□□□□□ -0.11
TRIM47-201ENST00000254816 C8orf49Q96NF6 230 aa14.34□□□□□ -0.11
TRIM47-201ENST00000254816 HIVEP1P15822 2718 aa14.33□□□□□ -0.12
TRIM47-201ENST00000254816 SLURP1P55000 103 aa14.33□□□□□ -0.12
TRIM47-201ENST00000254816 LINC01006Q8NI28 216 aa14.33□□□□□ -0.12
TRIM47-201ENST00000254816 Q8TAT8 98 aa14.33□□□□□ -0.12
TRIM47-201ENST00000254816 NDUFAF3Q9BU61 184 aa14.33□□□□□ -0.12
TRIM47-201ENST00000254816 ZNF492Q9P255 531 aa14.33□□□□□ -0.12
TRIM47-201ENST00000254816 TRBV6-1A0A0K0K1D8 114 aa14.32□□□□□ -0.12
TRIM47-201ENST00000254816 A0A1B0GXF2 115 aa14.32□□□□□ -0.12
TRIM47-201ENST00000254816 SRSF2Q01130 221 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms