RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 NPFFR1Q9GZQ6 430 aa12.24□□□□□ -0.45
RFX1-201ENST00000254325 TMEM213A2RRL7 107 aa12.23□□□□□ -0.45
RFX1-201ENST00000254325 HAX1O00165 279 aa12.23□□□□□ -0.45
RFX1-201ENST00000254325 OR4C46A6NHA9 309 aa12.23□□□□□ -0.45
RFX1-201ENST00000254325 Q5PR19 223 aa12.23□□□□□ -0.45
RFX1-201ENST00000254325 GDF5OSQ5U4N7 250 aa12.23□□□□□ -0.45
RFX1-201ENST00000254325 OR4X2Q8NGF9 303 aa12.23□□□□□ -0.45
RFX1-201ENST00000254325 PRSS22Q9GZN4 317 aa12.23□□□□□ -0.45
RFX1-201ENST00000254325 D6R8Y8 96 aa12.23□□□□□ -0.45
RFX1-201ENST00000254325 LCNL1Q6ZST4 164 aa12.22□□□□□ -0.45
RFX1-201ENST00000254325 AMN1Q8IY45 258 aa12.22□□□□□ -0.45
RFX1-201ENST00000254325 ATMQ13315 3056 aa12.22□□□□□ -0.45
RFX1-201ENST00000254325 ID1P41134 155 aa12.22□□□□□ -0.45
RFX1-201ENST00000254325 SCGB2A2Q13296 93 aa12.22□□□□□ -0.45
RFX1-201ENST00000254325 GLMPQ8WWB7 406 aa12.22□□□□□ -0.45
RFX1-201ENST00000254325 MAP1LC3AQ9H492 121 aa12.22□□□□□ -0.45
RFX1-201ENST00000254325 SRD5A1P18405 259 aa12.21□□□□□ -0.45
RFX1-201ENST00000254325 USMG5Q96IX5 58 aa12.21□□□□□ -0.45
RFX1-201ENST00000254325 PRSS47A8MTI9 375 aa12.21□□□□□ -0.45
RFX1-201ENST00000254325 ESDP10768 282 aa12.21□□□□□ -0.45
RFX1-201ENST00000254325 PMCHL2Q9BQD1 86 aa12.21□□□□□ -0.45
RFX1-201ENST00000254325 ZFYVE26Q68DK2 2539 aa12.21□□□□□ -0.46
RFX1-201ENST00000254325 BUB3O43684 328 aa12.21□□□□□ -0.46
RFX1-201ENST00000254325 SLC25A16P16260 332 aa12.21□□□□□ -0.46
RFX1-201ENST00000254325 C8orf86Q6ZUL3 223 aa12.21□□□□□ -0.46
RFX1-201ENST00000254325 IL17RELQ6ZVW7 336 aa12.21□□□□□ -0.46
RFX1-201ENST00000254325 NCR2O95944 276 aa12.2□□□□□ -0.46
RFX1-201ENST00000254325 COL5A1-AS1Q5SY13 56 aa12.2□□□□□ -0.46
RFX1-201ENST00000254325 OVOL3O00110 214 aa12.2□□□□□ -0.46
RFX1-201ENST00000254325 EGR2P11161 476 aaPredicted RBP12.2□□□□□ -0.46
RFX1-201ENST00000254325 ASPMQ8IZT6 3477 aa12.2□□□□□ -0.46
RFX1-201ENST00000254325 PRSS1P07477 247 aa12.2□□□□□ -0.46
RFX1-201ENST00000254325 BLCAPP62952 87 aa12.2□□□□□ -0.46
RFX1-201ENST00000254325 TDRG1Q3Y452 100 aa12.2□□□□□ -0.46
RFX1-201ENST00000254325 LINC01356Q8N9X3 169 aa12.2□□□□□ -0.46
RFX1-201ENST00000254325 DMRTA1Q5VZB9 504 aa12.2□□□□□ -0.46
RFX1-201ENST00000254325 SMIM17P0DL12 118 aa12.19□□□□□ -0.46
RFX1-201ENST00000254325 TCTAP57738 103 aa12.19□□□□□ -0.46
RFX1-201ENST00000254325 KLF5Q13887 457 aaPredicted RBP12.19□□□□□ -0.46
RFX1-201ENST00000254325 C9orf139Q6ZV77 190 aa12.19□□□□□ -0.46
RFX1-201ENST00000254325 CCDC140Q96MF4 163 aa12.19□□□□□ -0.46
RFX1-201ENST00000254325 TRAV9-2A0A087WT02 112 aa12.19□□□□□ -0.46
RFX1-201ENST00000254325 A0A1B0GXF2 115 aa12.19□□□□□ -0.46
RFX1-201ENST00000254325 IGLV2-11P01706 119 aa12.19□□□□□ -0.46
RFX1-201ENST00000254325 MGPP08493 103 aa12.19□□□□□ -0.46
RFX1-201ENST00000254325 TEX43Q6ZNM6 134 aa12.19□□□□□ -0.46
RFX1-201ENST00000254325 SMKR1H3BMG3 65 aa12.18□□□□□ -0.46
RFX1-201ENST00000254325 USP9YO00507 2555 aaPredicted RBP12.18□□□□□ -0.46
RFX1-201ENST00000254325 TRBV6-1A0A0K0K1D8 114 aa12.18□□□□□ -0.46
RFX1-201ENST00000254325 RNF223E7ERA6 249 aa12.18□□□□□ -0.46
RFX1-201ENST00000254325 HINT1P49773 126 aaPredicted RBP12.18□□□□□ -0.46
RFX1-201ENST00000254325 C20orf144Q9BQM9 153 aa12.18□□□□□ -0.46
RFX1-201ENST00000254325 PHLDA3Q9Y5J5 127 aa12.18□□□□□ -0.46
RFX1-201ENST00000254325 M0R381 172 aa12.18□□□□□ -0.46
RFX1-201ENST00000254325 PRAC2D3DTV9 90 aa12.18□□□□□ -0.46
RFX1-201ENST00000254325 EREGO14944 169 aa12.18□□□□□ -0.46
RFX1-201ENST00000254325 GTF2H5Q6ZYL4 71 aa12.18□□□□□ -0.46
RFX1-201ENST00000254325 DPF1Q92782 380 aa12.18□□□□□ -0.46
RFX1-201ENST00000254325 MCRIP2Q9BUT9 160 aaKnown RBP12.17□□□□□ -0.46
RFX1-201ENST00000254325 IGKV3-20P01619 116 aa12.17□□□□□ -0.46
RFX1-201ENST00000254325 GATA3P23771 443 aa12.17□□□□□ -0.46
RFX1-201ENST00000254325 RHPN1-AS1Q9BWJ2 59 aa12.17□□□□□ -0.46
RFX1-201ENST00000254325 LINC00310P59036 64 aa12.17□□□□□ -0.46
RFX1-201ENST00000254325 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.17□□□□□ -0.46
RFX1-201ENST00000254325 IGHV1-24A0A0C4DH33 117 aa12.16□□□□□ -0.46
RFX1-201ENST00000254325 VWC2LB2RUY7 222 aa12.16□□□□□ -0.46
RFX1-201ENST00000254325 RNASE4P34096 147 aaKnown RBP12.16□□□□□ -0.46
RFX1-201ENST00000254325 FXYD7P58549 80 aa12.16□□□□□ -0.46
RFX1-201ENST00000254325 C18orf15Q96N68 181 aa12.16□□□□□ -0.46
RFX1-201ENST00000254325 F5H697 171 aa12.16□□□□□ -0.46
RFX1-201ENST00000254325 IFI27P40305 119 aaPredicted RBP12.16□□□□□ -0.46
RFX1-201ENST00000254325 FAM104BQ5XKR9 115 aa12.16□□□□□ -0.46
RFX1-201ENST00000254325 AGPAT4-IT1Q9H0P7 198 aa12.16□□□□□ -0.46
RFX1-201ENST00000254325 F8W735 103 aaPredicted RBP12.16□□□□□ -0.46
RFX1-201ENST00000254325 SYS1-DBNDD2H3BUS1 97 aa12.16□□□□□ -0.46
RFX1-201ENST00000254325 EVI2AP22794 236 aa12.16□□□□□ -0.46
RFX1-201ENST00000254325 NAV2Q8IVL1 2488 aa12.16□□□□□ -0.46
RFX1-201ENST00000254325 H3BVH4 76 aa12.15□□□□□ -0.46
RFX1-201ENST00000254325 Q71RC1 249 aaPredicted RBP12.15□□□□□ -0.46
RFX1-201ENST00000254325 NDUFA4O00483 81 aa12.15□□□□□ -0.46
RFX1-201ENST00000254325 FCER1GP30273 86 aa12.15□□□□□ -0.46
RFX1-201ENST00000254325 OVOL1O14753 267 aa12.15□□□□□ -0.46
RFX1-201ENST00000254325 PAX1P15863 534 aa12.15□□□□□ -0.46
RFX1-201ENST00000254325 KIR2DL5BA0A0G2JN68 375 aa12.15□□□□□ -0.47
RFX1-201ENST00000254325 KIR2DL5BA0A0G2JPC4 375 aa12.15□□□□□ -0.47
RFX1-201ENST00000254325 TMEM95Q3KNT9 176 aa12.15□□□□□ -0.47
RFX1-201ENST00000254325 KIR2DL5AQ8N109 375 aa12.15□□□□□ -0.47
RFX1-201ENST00000254325 IGHV4-59P01825 116 aa12.14□□□□□ -0.47
RFX1-201ENST00000254325 DUX5Q96PT3 197 aa12.14□□□□□ -0.47
RFX1-201ENST00000254325 NPIPB6E9PJ23 425 aa12.14□□□□□ -0.47
RFX1-201ENST00000254325 EBLN2Q6P2I7 272 aa12.14□□□□□ -0.47
RFX1-201ENST00000254325 SLC25A34Q6PIV7 304 aa12.14□□□□□ -0.47
RFX1-201ENST00000254325 PET117Q6UWS5 81 aa12.14□□□□□ -0.47
RFX1-201ENST00000254325 SNHG12Q9BXW3 62 aa12.14□□□□□ -0.47
RFX1-201ENST00000254325 KLK15Q9H2R5 256 aa12.14□□□□□ -0.47
RFX1-201ENST00000254325 PEF1Q9UBV8 284 aaKnown RBP12.14□□□□□ -0.47
RFX1-201ENST00000254325 SMAD5-AS1Q9Y6J3 95 aa12.14□□□□□ -0.47
RFX1-201ENST00000254325 ASIPP42127 132 aa12.14□□□□□ -0.47
RFX1-201ENST00000254325 CRIP1P50238 77 aa12.14□□□□□ -0.47
RFX1-201ENST00000254325 DEFB112Q30KQ8 113 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms