RNA–Protein interactions for RNA: ENST00000253925.11

PPFIA1-201, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA1, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-201ENST00000253925 PLNP26678 52 aa15.32■□□□□ 0.04
PPFIA1-201ENST00000253925 UBE2E1P51965 193 aa15.32■□□□□ 0.04
PPFIA1-201ENST00000253925 ZC2HC1BQ5TFG8 222 aa15.32■□□□□ 0.04
PPFIA1-201ENST00000253925 ETDBQ3ZM63 59 aa15.32■□□□□ 0.04
PPFIA1-201ENST00000253925 PRR25Q96S07 402 aa15.32■□□□□ 0.04
PPFIA1-201ENST00000253925 PGPEP1Q9NXJ5 209 aa15.32■□□□□ 0.04
PPFIA1-201ENST00000253925 TNFRSF6BO95407 300 aa15.31■□□□□ 0.04
PPFIA1-201ENST00000253925 CD300EQ496F6 205 aaPredicted RBP15.31■□□□□ 0.04
PPFIA1-201ENST00000253925 ERCC8Q13216 396 aa15.31■□□□□ 0.04
PPFIA1-201ENST00000253925 BVES-AS1Q5T3Y7 98 aa15.31■□□□□ 0.04
PPFIA1-201ENST00000253925 C1orf122Q6ZSJ8 110 aa15.31■□□□□ 0.04
PPFIA1-201ENST00000253925 TECTAO75443 2155 aa15.31■□□□□ 0.04
PPFIA1-201ENST00000253925 SUMO2P61956 95 aaKnown RBP15.31■□□□□ 0.04
PPFIA1-201ENST00000253925 LCNL1Q6ZST4 164 aa15.31■□□□□ 0.04
PPFIA1-201ENST00000253925 CR1LQ2VPA4 569 aa15.3■□□□□ 0.04
PPFIA1-201ENST00000253925 BPESC1Q9GZL8 116 aa15.3■□□□□ 0.04
PPFIA1-201ENST00000253925 H3BUX3 64 aa15.3■□□□□ 0.04
PPFIA1-201ENST00000253925 ZC2HC1AQ96GY0 325 aa15.3■□□□□ 0.04
PPFIA1-201ENST00000253925 ZNF48Q96MX3 618 aaPredicted RBP15.3■□□□□ 0.04
PPFIA1-201ENST00000253925 PEMTQ9UBM1 199 aa15.3■□□□□ 0.04
PPFIA1-201ENST00000253925 GAGE12HA6NDE8 117 aa15.3■□□□□ 0.04
PPFIA1-201ENST00000253925 ATP6V0E1O15342 81 aa15.3■□□□□ 0.04
PPFIA1-201ENST00000253925 SRD5A1P18405 259 aa15.3■□□□□ 0.04
PPFIA1-201ENST00000253925 BRD3OSQ6XYD6 125 aa15.3■□□□□ 0.04
PPFIA1-201ENST00000253925 KMT2EQ8IZD2 1858 aa15.29■□□□□ 0.04
PPFIA1-201ENST00000253925 TDRG1Q3Y452 100 aa15.29■□□□□ 0.04
PPFIA1-201ENST00000253925 TRGV11A0A075B6L2 103 aa15.29■□□□□ 0.04
PPFIA1-201ENST00000253925 KLF5Q13887 457 aaPredicted RBP15.29■□□□□ 0.04
PPFIA1-201ENST00000253925 ZNF491Q8N8L2 437 aa15.29■□□□□ 0.04
PPFIA1-201ENST00000253925 ITLN2Q8WWU7 325 aaPredicted RBP15.29■□□□□ 0.04
PPFIA1-201ENST00000253925 ERG28Q9UKR5 140 aa15.29■□□□□ 0.04
PPFIA1-201ENST00000253925 ASPHD1Q5U4P2 390 aa15.29■□□□□ 0.04
PPFIA1-201ENST00000253925 ZNF295-AS1Q8N0V1 137 aa15.29■□□□□ 0.04
PPFIA1-201ENST00000253925 CITED1Q99966 193 aa15.29■□□□□ 0.04
PPFIA1-201ENST00000253925 CSTL1Q9H114 145 aa15.29■□□□□ 0.04
PPFIA1-201ENST00000253925 LINC01587Q99440 93 aa15.28■□□□□ 0.04
PPFIA1-201ENST00000253925 NUPR1O60356 82 aa15.28■□□□□ 0.04
PPFIA1-201ENST00000253925 IGF2-ASQ6U949 168 aa15.28■□□□□ 0.04
PPFIA1-201ENST00000253925 MSRB2Q9Y3D2 182 aa15.28■□□□□ 0.04
PPFIA1-201ENST00000253925 IGHV2-70DA0A0C4DH43 119 aa15.28■□□□□ 0.04
PPFIA1-201ENST00000253925 PSMB11A5LHX3 300 aa15.28■□□□□ 0.04
PPFIA1-201ENST00000253925 ZFHX2Q9C0A1 2572 aaPredicted RBP15.27■□□□□ 0.04
PPFIA1-201ENST00000253925 MRPL51Q4U2R6 128 aaKnown RBP15.27■□□□□ 0.04
PPFIA1-201ENST00000253925 C14orf178Q8N769 122 aaPredicted RBP15.27■□□□□ 0.04
PPFIA1-201ENST00000253925 PRSS57Q6UWY2 283 aa15.27■□□□□ 0.03
PPFIA1-201ENST00000253925 OR13C6PQ8NH95 151 aa15.27■□□□□ 0.03
PPFIA1-201ENST00000253925 MED12LQ86YW9 2145 aa15.26■□□□□ 0.03
PPFIA1-201ENST00000253925 EML6Q6ZMW3 1958 aa15.26■□□□□ 0.03
PPFIA1-201ENST00000253925 SHISA9B4DS77 424 aa15.26■□□□□ 0.03
PPFIA1-201ENST00000253925 DSCR9P59020 149 aa15.26■□□□□ 0.03
PPFIA1-201ENST00000253925 PATE2Q6UY27 113 aa15.26■□□□□ 0.03
PPFIA1-201ENST00000253925 COX8AP10176 69 aa15.25■□□□□ 0.03
PPFIA1-201ENST00000253925 FAM167A-AS1Q96KT0 104 aa15.25■□□□□ 0.03
PPFIA1-201ENST00000253925 A0A1W2PPM0 123 aa15.25■□□□□ 0.03
PPFIA1-201ENST00000253925 RNF182Q8N6D2 247 aa15.25■□□□□ 0.03
PPFIA1-201ENST00000253925 RHPN1-AS1Q9BWJ2 59 aa15.25■□□□□ 0.03
PPFIA1-201ENST00000253925 NUP210LQ5VU65 1888 aa15.25■□□□□ 0.03
PPFIA1-201ENST00000253925 INS-IGF2F8WCM5 200 aa15.25■□□□□ 0.03
PPFIA1-201ENST00000253925 VCYO14598 125 aa15.25■□□□□ 0.03
PPFIA1-201ENST00000253925 LGALS9BQ3B8N2 356 aa15.25■□□□□ 0.03
PPFIA1-201ENST00000253925 MORN5Q5VZ52 161 aa15.25■□□□□ 0.03
PPFIA1-201ENST00000253925 LGALS9CQ6DKI2 356 aa15.25■□□□□ 0.03
PPFIA1-201ENST00000253925 B4DSR2 109 aa15.25■□□□□ 0.03
PPFIA1-201ENST00000253925 SEM1Q6ZVN7 128 aa15.25■□□□□ 0.03
PPFIA1-201ENST00000253925 IGF2BP2-AS1Q96M15 143 aa15.25■□□□□ 0.03
PPFIA1-201ENST00000253925 WFDC12Q8WWY7 111 aa15.24■□□□□ 0.03
PPFIA1-201ENST00000253925 SPAG8Q99932 426 aaPredicted RBP15.24■□□□□ 0.03
PPFIA1-201ENST00000253925 SIGLEC8Q9NYZ4 499 aa15.24■□□□□ 0.03
PPFIA1-201ENST00000253925 ZNF688P0C7X2 276 aa15.24■□□□□ 0.03
PPFIA1-201ENST00000253925 IGKV1OR2-108A0A075B7D4 117 aa15.24■□□□□ 0.03
PPFIA1-201ENST00000253925 BRWD1-AS2P59051 145 aa15.23■□□□□ 0.03
PPFIA1-201ENST00000253925 C22orf46C9J442 243 aa15.23■□□□□ 0.03
PPFIA1-201ENST00000253925 F8W1H4 67 aa15.23■□□□□ 0.03
PPFIA1-201ENST00000253925 GP9P14770 177 aa15.23■□□□□ 0.03
PPFIA1-201ENST00000253925 IL17RELQ6ZVW7 336 aa15.23■□□□□ 0.03
PPFIA1-201ENST00000253925 TMEM101Q96IK0 257 aa15.23■□□□□ 0.03
PPFIA1-201ENST00000253925 ARHGAP21Q5T5U3 1957 aa15.23■□□□□ 0.03
PPFIA1-201ENST00000253925 PROP1O75360 226 aa15.23■□□□□ 0.03
PPFIA1-201ENST00000253925 MSMPQ1L6U9 139 aa15.23■□□□□ 0.03
PPFIA1-201ENST00000253925 Q8N8P6 123 aa15.23■□□□□ 0.03
PPFIA1-201ENST00000253925 DAZ1Q9NQZ3 744 aaKnown RBP15.23■□□□□ 0.03
PPFIA1-201ENST00000253925 IGHV3-64A0A075B6Q5 118 aa15.22■□□□□ 0.03
PPFIA1-201ENST00000253925 TMEM8BA6NDV4 472 aa15.22■□□□□ 0.03
PPFIA1-201ENST00000253925 G3V318 75 aa15.22■□□□□ 0.03
PPFIA1-201ENST00000253925 FCN3O75636 299 aa15.22■□□□□ 0.03
PPFIA1-201ENST00000253925 NOTCH3Q9UM47 2321 aa15.22■□□□□ 0.03
PPFIA1-201ENST00000253925 SAP30O75446 220 aa15.22■□□□□ 0.03
PPFIA1-201ENST00000253925 C17orf77Q96MU5 243 aa15.21■□□□□ 0.03
PPFIA1-201ENST00000253925 CD28P10747 220 aa15.21■□□□□ 0.03
PPFIA1-201ENST00000253925 PRR14LQ5THK1 2151 aa15.21■□□□□ 0.03
PPFIA1-201ENST00000253925 KLF12Q9Y4X4 402 aa15.2■□□□□ 0.02
PPFIA1-201ENST00000253925 PTPRSQ13332 1948 aa15.2■□□□□ 0.02
PPFIA1-201ENST00000253925 GNLYP22749 145 aa15.2■□□□□ 0.02
PPFIA1-201ENST00000253925 C8orf86Q6ZUL3 223 aa15.2■□□□□ 0.02
PPFIA1-201ENST00000253925 C2orf82Q6UX34 121 aa15.2■□□□□ 0.02
PPFIA1-201ENST00000253925 IGKV3OR2-268A0A0C4DH90 116 aa15.2■□□□□ 0.02
PPFIA1-201ENST00000253925 C9JAW5 83 aa15.2■□□□□ 0.02
PPFIA1-201ENST00000253925 OVOL3O00110 214 aa15.2■□□□□ 0.02
PPFIA1-201ENST00000253925 DEFB125Q8N687 156 aa15.2■□□□□ 0.02
PPFIA1-201ENST00000253925 IGKV1-17P01599 117 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms