RNA–Protein interactions for RNA: ENST00000243103.3

HOXC12-201, Transcript of homeobox C12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC12, Length 3,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12-201ENST00000243103 COL5A1P20908 1838 aaPredicted RBP11.93□□□□□ -0.5
HOXC12-201ENST00000243103 IGHV3-66A0A0C4DH42 116 aa11.93□□□□□ -0.5
HOXC12-201ENST00000243103 C15orf65H3BRN8 121 aa11.93□□□□□ -0.5
HOXC12-201ENST00000243103 IGKCP01834 107 aa11.93□□□□□ -0.5
HOXC12-201ENST00000243103 FOXI1Q12951 378 aa11.93□□□□□ -0.5
HOXC12-201ENST00000243103 FHL3Q13643 280 aa11.93□□□□□ -0.5
HOXC12-201ENST00000243103 Q1RN00 199 aa11.93□□□□□ -0.5
HOXC12-201ENST00000243103 RASL11AQ6T310 242 aa11.93□□□□□ -0.5
HOXC12-201ENST00000243103 TMEM14BQ9NUH8 114 aa11.93□□□□□ -0.5
HOXC12-201ENST00000243103 SMPXQ9UHP9 88 aa11.93□□□□□ -0.5
HOXC12-201ENST00000243103 CRYBG3Q68DQ2 2970 aa11.93□□□□□ -0.5
HOXC12-201ENST00000243103 IGHV3-49A0A0A0MS15 119 aa11.93□□□□□ -0.5
HOXC12-201ENST00000243103 F8W1H4 67 aa11.93□□□□□ -0.5
HOXC12-201ENST00000243103 LY6HO94772 140 aa11.93□□□□□ -0.5
HOXC12-201ENST00000243103 PRCDQ00LT1 54 aa11.93□□□□□ -0.5
HOXC12-201ENST00000243103 ZFAND6Q6FIF0 208 aa11.93□□□□□ -0.5
HOXC12-201ENST00000243103 SOX21Q9Y651 276 aaPredicted RBP11.93□□□□□ -0.5
HOXC12-201ENST00000243103 DSCAMO60469 2012 aa11.92□□□□□ -0.5
HOXC12-201ENST00000243103 IGHV3-64A0A075B6Q5 118 aa11.92□□□□□ -0.5
HOXC12-201ENST00000243103 TRBV7-9A0A0J9YWB2 115 aa11.92□□□□□ -0.5
HOXC12-201ENST00000243103 UPK2O00526 184 aa11.92□□□□□ -0.5
HOXC12-201ENST00000243103 FAM231DQ6ZW35 169 aa11.92□□□□□ -0.5
HOXC12-201ENST00000243103 DPF1Q92782 380 aa11.92□□□□□ -0.5
HOXC12-201ENST00000243103 WNK1Q9H4A3 2382 aa11.92□□□□□ -0.5
HOXC12-201ENST00000243103 Q86TA4 180 aa11.92□□□□□ -0.5
HOXC12-201ENST00000243103 C11orf53Q8IXP5 236 aa11.92□□□□□ -0.5
HOXC12-201ENST00000243103 KLHL30-AS1Q8NEE0 82 aa11.92□□□□□ -0.5
HOXC12-201ENST00000243103 OR1L8Q8NGR8 309 aa11.92□□□□□ -0.5
HOXC12-201ENST00000243103 RITA1Q96K30 269 aa11.91□□□□□ -0.5
HOXC12-201ENST00000243103 CCDC168Q8NDH2 2452 aa11.91□□□□□ -0.5
HOXC12-201ENST00000243103 PCSK5Q92824 1860 aa11.91□□□□□ -0.5
HOXC12-201ENST00000243103 WDR31Q8NA23 367 aa11.91□□□□□ -0.5
HOXC12-201ENST00000243103 CXXC4Q9H2H0 198 aa11.91□□□□□ -0.5
HOXC12-201ENST00000243103 SS18L1O75177 396 aaPredicted RBP11.91□□□□□ -0.5
HOXC12-201ENST00000243103 GAGE5Q13069 117 aa11.91□□□□□ -0.5
HOXC12-201ENST00000243103 GAGE6Q13070 117 aa11.91□□□□□ -0.5
HOXC12-201ENST00000243103 HOXA3O43365 443 aaPredicted RBP11.9□□□□□ -0.5
HOXC12-201ENST00000243103 TMEM133Q9H2Q1 129 aa11.9□□□□□ -0.5
HOXC12-201ENST00000243103 CTSZQ9UBR2 303 aa11.9□□□□□ -0.5
HOXC12-201ENST00000243103 MYO18BQ8IUG5 2567 aa11.9□□□□□ -0.5
HOXC12-201ENST00000243103 CDX4O14627 284 aaPredicted RBP11.9□□□□□ -0.5
HOXC12-201ENST00000243103 CNTFRP26992 372 aa11.9□□□□□ -0.5
HOXC12-201ENST00000243103 IGHV4-39P01824 125 aa11.89□□□□□ -0.51
HOXC12-201ENST00000243103 HLA-DMBP28068 263 aa11.89□□□□□ -0.51
HOXC12-201ENST00000243103 TMEM155Q4W5P6 130 aa11.89□□□□□ -0.51
HOXC12-201ENST00000243103 MRPL32Q9BYC8 188 aaKnown RBP11.89□□□□□ -0.51
HOXC12-201ENST00000243103 FOXA2Q9Y261 457 aaPredicted RBP11.89□□□□□ -0.51
HOXC12-201ENST00000243103 NOTCH2Q04721 2471 aa11.89□□□□□ -0.51
HOXC12-201ENST00000243103 NCBP2LA6PVI3 153 aaKnown RBP11.89□□□□□ -0.51
HOXC12-201ENST00000243103 HIGD1AQ9Y241 93 aa11.89□□□□□ -0.51
HOXC12-201ENST00000243103 USP9XQ93008 2570 aaPredicted RBP11.88□□□□□ -0.51
HOXC12-201ENST00000243103 CD59P13987 128 aa11.88□□□□□ -0.51
HOXC12-201ENST00000243103 LGALS9BQ3B8N2 356 aa11.88□□□□□ -0.51
HOXC12-201ENST00000243103 LGALS9CQ6DKI2 356 aa11.88□□□□□ -0.51
HOXC12-201ENST00000243103 PROCRQ9UNN8 238 aa11.88□□□□□ -0.51
HOXC12-201ENST00000243103 GAGE2BQ13066 116 aa11.88□□□□□ -0.51
HOXC12-201ENST00000243103 GAGE2EQ4V326 116 aa11.88□□□□□ -0.51
HOXC12-201ENST00000243103 CDIP1Q9H305 208 aa11.88□□□□□ -0.51
HOXC12-201ENST00000243103 GAGE2DQ9UEU5 116 aa11.88□□□□□ -0.51
HOXC12-201ENST00000243103 JPT1Q9UK76 154 aa11.88□□□□□ -0.51
HOXC12-201ENST00000243103 SNCGO76070 127 aa11.88□□□□□ -0.51
HOXC12-201ENST00000243103 FMC1Q96HJ9 113 aa11.88□□□□□ -0.51
HOXC12-201ENST00000243103 IGKV3D-15A0A087WSY6 115 aa11.87□□□□□ -0.51
HOXC12-201ENST00000243103 OR11H12B2RN74 326 aa11.87□□□□□ -0.51
HOXC12-201ENST00000243103 ZNF562Q6V9R5 426 aa11.87□□□□□ -0.51
HOXC12-201ENST00000243103 OR11H1Q8NG94 326 aa11.87□□□□□ -0.51
HOXC12-201ENST00000243103 OR11H2Q8NH07 326 aa11.87□□□□□ -0.51
HOXC12-201ENST00000243103 SPATA25Q9BR10 227 aa11.87□□□□□ -0.51
HOXC12-201ENST00000243103 MAP1LC3AQ9H492 121 aa11.87□□□□□ -0.51
HOXC12-201ENST00000243103 ONECUT1Q9UBC0 465 aa11.87□□□□□ -0.51
HOXC12-201ENST00000243103 TRGV8A0A0C4DH27 118 aa11.87□□□□□ -0.51
HOXC12-201ENST00000243103 DPM2O94777 84 aa11.87□□□□□ -0.51
HOXC12-201ENST00000243103 SCGB1A1P11684 91 aa11.87□□□□□ -0.51
HOXC12-201ENST00000243103 COX7A1P24310 79 aa11.87□□□□□ -0.51
HOXC12-201ENST00000243103 C7orf69Q9H7B7 122 aa11.87□□□□□ -0.51
HOXC12-201ENST00000243103 SUB1P53999 127 aaKnown RBP eCLIP11.86□□□□□ -0.51
HOXC12-201ENST00000243103 RRN3P1Q2M238 152 aa11.86□□□□□ -0.51
HOXC12-201ENST00000243103 FAM159AQ6UWV7 190 aa11.86□□□□□ -0.51
HOXC12-201ENST00000243103 GCSAMQ8N6F7 178 aa11.86□□□□□ -0.51
HOXC12-201ENST00000243103 AAMDCQ9H7C9 122 aa11.86□□□□□ -0.51
HOXC12-201ENST00000243103 IGKV3-7A0A075B6H7 116 aa11.86□□□□□ -0.51
HOXC12-201ENST00000243103 IGHV1-18A0A0C4DH31 117 aa11.86□□□□□ -0.51
HOXC12-201ENST00000243103 C9JAW5 83 aa11.86□□□□□ -0.51
HOXC12-201ENST00000243103 E9PLD3 99 aa11.86□□□□□ -0.51
HOXC12-201ENST00000243103 NPC2P61916 151 aa11.86□□□□□ -0.51
HOXC12-201ENST00000243103 Q6ZQT7 251 aa11.86□□□□□ -0.51
HOXC12-201ENST00000243103 SLC25A48Q6ZT89 311 aaKnown RBP11.86□□□□□ -0.51
HOXC12-201ENST00000243103 MYOZ3Q8TDC0 251 aa11.86□□□□□ -0.51
HOXC12-201ENST00000243103 RPL32P62910 135 aaKnown RBP11.86□□□□□ -0.51
HOXC12-201ENST00000243103 TRAV4A0A0B4J268 109 aa11.85□□□□□ -0.51
HOXC12-201ENST00000243103 HAX1O00165 279 aa11.85□□□□□ -0.51
HOXC12-201ENST00000243103 RS1O15537 224 aa11.85□□□□□ -0.51
HOXC12-201ENST00000243103 CRIP1P50238 77 aa11.85□□□□□ -0.51
HOXC12-201ENST00000243103 AJUBAQ96IF1 538 aa11.85□□□□□ -0.51
HOXC12-201ENST00000243103 C19orf71A6NCJ1 209 aa11.85□□□□□ -0.51
HOXC12-201ENST00000243103 FAM104BQ5XKR9 115 aa11.85□□□□□ -0.51
HOXC12-201ENST00000243103 ZNF714Q96N38 554 aa11.85□□□□□ -0.51
HOXC12-201ENST00000243103 RASL11BQ9BPW5 248 aa11.85□□□□□ -0.51
HOXC12-201ENST00000243103 A0A1W2PPI3 338 aa11.85□□□□□ -0.51
HOXC12-201ENST00000243103 ZNF815PA8K554 130 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 291.5 ms