RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 TTC28Q96AY4 2481 aa6.65□□□□□ -1.35
APOB-201ENST00000233242 PF4P02776 101 aa6.65□□□□□ -1.35
APOB-201ENST00000233242 NDUFS7O75251 213 aa6.65□□□□□ -1.35
APOB-201ENST00000233242 C15orf53Q8NAA6 179 aa6.65□□□□□ -1.35
APOB-201ENST00000233242 RNASE6Q93091 150 aaKnown RBP6.65□□□□□ -1.35
APOB-201ENST00000233242 TMEM213A2RRL7 107 aa6.64□□□□□ -1.35
APOB-201ENST00000233242 DENND4AQ7Z401 1863 aa6.64□□□□□ -1.35
APOB-201ENST00000233242 PRSS22Q9GZN4 317 aa6.64□□□□□ -1.35
APOB-201ENST00000233242 VWA8A3KMH1 1905 aa6.64□□□□□ -1.35
APOB-201ENST00000233242 OTOGLQ3ZCN5 2332 aa6.64□□□□□ -1.35
APOB-201ENST00000233242 J3QQQ9 107 aa6.64□□□□□ -1.35
APOB-201ENST00000233242 PLXND1Q9Y4D7 1925 aa6.64□□□□□ -1.35
APOB-201ENST00000233242 TMEM178BH3BS89 294 aa6.64□□□□□ -1.35
APOB-201ENST00000233242 INSP01308 110 aa6.64□□□□□ -1.35
APOB-201ENST00000233242 CEACAM8P31997 349 aaPredicted RBP6.64□□□□□ -1.35
APOB-201ENST00000233242 B5MCH6 92 aa6.64□□□□□ -1.35
APOB-201ENST00000233242 NOTCH2Q04721 2471 aa6.64□□□□□ -1.35
APOB-201ENST00000233242 LINC01560Q8TB33 94 aa6.64□□□□□ -1.35
APOB-201ENST00000233242 HIGD1BQ9P298 99 aa6.64□□□□□ -1.35
APOB-201ENST00000233242 NDUFA12Q9UI09 145 aa6.64□□□□□ -1.35
APOB-201ENST00000233242 THBDP07204 575 aa6.64□□□□□ -1.35
APOB-201ENST00000233242 C20orf204Q6ZNR8 217 aa6.64□□□□□ -1.35
APOB-201ENST00000233242 I3L3M4 83 aa6.64□□□□□ -1.35
APOB-201ENST00000233242 LTAP01374 205 aa6.64□□□□□ -1.35
APOB-201ENST00000233242 C6orf226Q5I0X4 101 aa6.64□□□□□ -1.35
APOB-201ENST00000233242 PRR14LQ5THK1 2151 aa6.64□□□□□ -1.35
APOB-201ENST00000233242 GATA4P43694 442 aa6.64□□□□□ -1.35
APOB-201ENST00000233242 VWC2Q2TAL6 325 aa6.64□□□□□ -1.35
APOB-201ENST00000233242 ZNF114Q8NC26 417 aa6.64□□□□□ -1.35
APOB-201ENST00000233242 RBMY1FQ15415 496 aaKnown RBP6.63□□□□□ -1.35
APOB-201ENST00000233242 ATP6V0E2Q8NHE4 81 aa6.63□□□□□ -1.35
APOB-201ENST00000233242 DPH3Q96FX2 82 aa6.63□□□□□ -1.35
APOB-201ENST00000233242 NPC2P61916 151 aa6.63□□□□□ -1.35
APOB-201ENST00000233242 FOXI2Q6ZQN5 318 aa6.63□□□□□ -1.35
APOB-201ENST00000233242 MRPL35Q9NZE8 188 aaKnown RBP6.63□□□□□ -1.35
APOB-201ENST00000233242 TEN1Q86WV5 123 aa6.63□□□□□ -1.35
APOB-201ENST00000233242 GAFA1Q96PS6 74 aa6.63□□□□□ -1.35
APOB-201ENST00000233242 IGKV1D-17A0A075B6S4 117 aa6.63□□□□□ -1.35
APOB-201ENST00000233242 C1orf159Q96HA4 380 aa6.63□□□□□ -1.35
APOB-201ENST00000233242 C7orf69Q9H7B7 122 aa6.63□□□□□ -1.35
APOB-201ENST00000233242 BUB1B-PAK6H3BSN5 160 aa6.63□□□□□ -1.35
APOB-201ENST00000233242 K7ERJ3 54 aa6.63□□□□□ -1.35
APOB-201ENST00000233242 NDUFC2O95298 119 aa6.63□□□□□ -1.35
APOB-201ENST00000233242 CDK2AP2O75956 126 aa6.63□□□□□ -1.35
APOB-201ENST00000233242 A0A1W2PPI3 338 aa6.63□□□□□ -1.35
APOB-201ENST00000233242 PRR19A6NJB7 356 aa6.63□□□□□ -1.35
APOB-201ENST00000233242 C5orf63A6NC05 138 aa6.62□□□□□ -1.35
APOB-201ENST00000233242 PRSS47A8MTI9 375 aa6.62□□□□□ -1.35
APOB-201ENST00000233242 ZFP36L1Q07352 338 aaKnown RBP6.62□□□□□ -1.35
APOB-201ENST00000233242 VMO1Q7Z5L0 202 aa6.62□□□□□ -1.35
APOB-201ENST00000233242 RNASE8Q8TDE3 154 aaKnown RBP6.62□□□□□ -1.35
APOB-201ENST00000233242 PLXNA4Q9HCM2 1894 aa6.62□□□□□ -1.35
APOB-201ENST00000233242 RNF144BQ7Z419 303 aa6.62□□□□□ -1.35
APOB-201ENST00000233242 THAP8Q8NA92 274 aa6.62□□□□□ -1.35
APOB-201ENST00000233242 SS18Q15532 418 aa6.62□□□□□ -1.35
APOB-201ENST00000233242 ZNF493Q6ZR52 646 aa6.62□□□□□ -1.35
APOB-201ENST00000233242 TEX48A0A1B0GUV7 120 aa6.62□□□□□ -1.35
APOB-201ENST00000233242 IGLL5B9A064 214 aa6.62□□□□□ -1.35
APOB-201ENST00000233242 ATOX1O00244 68 aa6.62□□□□□ -1.35
APOB-201ENST00000233242 IGLC1P0CG04 106 aa6.62□□□□□ -1.35
APOB-201ENST00000233242 DAZ1Q9NQZ3 744 aaKnown RBP6.62□□□□□ -1.35
APOB-201ENST00000233242 MORN5Q5VZ52 161 aa6.62□□□□□ -1.35
APOB-201ENST00000233242 Q6ZVH6 145 aa6.62□□□□□ -1.35
APOB-201ENST00000233242 PRR25Q96S07 402 aa6.62□□□□□ -1.35
APOB-201ENST00000233242 LCNL1Q6ZST4 164 aa6.62□□□□□ -1.35
APOB-201ENST00000233242 HS3ST6Q96QI5 342 aa6.62□□□□□ -1.35
APOB-201ENST00000233242 ATP5G1P05496 136 aa6.62□□□□□ -1.35
APOB-201ENST00000233242 RHOHQ15669 191 aa6.62□□□□□ -1.35
APOB-201ENST00000233242 ATP1A1-AS1Q5TC04 95 aa6.62□□□□□ -1.35
APOB-201ENST00000233242 K7EM74 188 aa6.61□□□□□ -1.35
APOB-201ENST00000233242 CFC1BP0CG36 223 aa6.61□□□□□ -1.35
APOB-201ENST00000233242 CFC1P0CG37 223 aa6.61□□□□□ -1.35
APOB-201ENST00000233242 VWCEQ96DN2 955 aa6.61□□□□□ -1.35
APOB-201ENST00000233242 COL4A5P29400 1685 aa6.61□□□□□ -1.35
APOB-201ENST00000233242 SYNJ2BPP57105 145 aa6.61□□□□□ -1.35
APOB-201ENST00000233242 SMIM20Q8N5G0 67 aa6.61□□□□□ -1.35
APOB-201ENST00000233242 SDHAF1A6NFY7 115 aa6.61□□□□□ -1.35
APOB-201ENST00000233242 IGKV1-16P04430 117 aa6.61□□□□□ -1.35
APOB-201ENST00000233242 Q8TCH9 128 aa6.61□□□□□ -1.35
APOB-201ENST00000233242 SCRT2Q9NQ03 307 aa6.61□□□□□ -1.35
APOB-201ENST00000233242 SS18L2Q9UHA2 77 aa6.61□□□□□ -1.35
APOB-201ENST00000233242 C17orf82Q86X59 251 aaPredicted RBP6.61□□□□□ -1.35
APOB-201ENST00000233242 SPRR3Q9UBC9 169 aa6.61□□□□□ -1.35
APOB-201ENST00000233242 AMTNQ6UX39 209 aa6.61□□□□□ -1.35
APOB-201ENST00000233242 FXYD5Q96DB9 178 aa6.61□□□□□ -1.35
APOB-201ENST00000233242 H3BRN7 92 aa6.61□□□□□ -1.35
APOB-201ENST00000233242 C3orf36Q3SXR2 165 aa6.61□□□□□ -1.35
APOB-201ENST00000233242 TRAV13-1A0A0B4J241 112 aa6.61□□□□□ -1.35
APOB-201ENST00000233242 IGKV1-39P01597 117 aa6.61□□□□□ -1.35
APOB-201ENST00000233242 IGKV1D-39P04432 117 aa6.61□□□□□ -1.35
APOB-201ENST00000233242 CSRP2Q16527 193 aa6.61□□□□□ -1.35
APOB-201ENST00000233242 ZNF833PQ6ZTB9 187 aa6.61□□□□□ -1.35
APOB-201ENST00000233242 DSCAML1Q8TD84 2053 aa6.61□□□□□ -1.35
APOB-201ENST00000233242 CDPF1Q6NVV7 123 aa6.6□□□□□ -1.35
APOB-201ENST00000233242 IGHV3OR16-10A0A075B7F0 116 aa6.6□□□□□ -1.35
APOB-201ENST00000233242 PRR31Q5SQ13 230 aa6.6□□□□□ -1.35
APOB-201ENST00000233242 ZNF581Q9P0T4 197 aa6.6□□□□□ -1.35
APOB-201ENST00000233242 G3V4G9 280 aa6.6□□□□□ -1.35
APOB-201ENST00000233242 H3BQ85 93 aa6.6□□□□□ -1.35
APOB-201ENST00000233242 PRR20EP86478 221 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms