RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 LINC00322Q6ZN03 302 aaPredicted RBP17.99■□□□□ 0.47
RRP9-201ENST00000232888 ZNF738Q8NE65 137 aa17.99■□□□□ 0.47
RRP9-201ENST00000232888 FAM231BA6NCW3 169 aa17.98■□□□□ 0.47
RRP9-201ENST00000232888 PROK1P58294 105 aa17.98■□□□□ 0.47
RRP9-201ENST00000232888 TMEM78Q5T7P6 136 aa17.98■□□□□ 0.47
RRP9-201ENST00000232888 OR9G4Q8NGQ1 327 aa17.98■□□□□ 0.47
RRP9-201ENST00000232888 LENEPQ9Y5L5 61 aa17.98■□□□□ 0.47
RRP9-201ENST00000232888 EDN2P20800 178 aa17.97■□□□□ 0.47
RRP9-201ENST00000232888 FHL3Q13643 280 aa17.97■□□□□ 0.47
RRP9-201ENST00000232888 DCANP1Q8TF63 244 aa17.97■□□□□ 0.47
RRP9-201ENST00000232888 C20orf173Q96LM9 149 aa17.97■□□□□ 0.47
RRP9-201ENST00000232888 GFRA4Q9GZZ7 299 aa17.97■□□□□ 0.47
RRP9-201ENST00000232888 MTORP42345 2549 aa17.97■□□□□ 0.47
RRP9-201ENST00000232888 ZNF138P52744 262 aa17.96■□□□□ 0.47
RRP9-201ENST00000232888 COX19Q49B96 90 aa17.96■□□□□ 0.47
RRP9-201ENST00000232888 LINC00477Q96M19 166 aa17.96■□□□□ 0.47
RRP9-201ENST00000232888 AGPAT4-IT1Q9H0P7 198 aa17.96■□□□□ 0.47
RRP9-201ENST00000232888 A0A1B0GUS0 222 aa17.96■□□□□ 0.46
RRP9-201ENST00000232888 SMUG1Q53HV7 270 aa17.96■□□□□ 0.46
RRP9-201ENST00000232888 FAM162BQ5T6X4 162 aa17.96■□□□□ 0.46
RRP9-201ENST00000232888 OR10J6PQ8NGY7 276 aa17.96■□□□□ 0.46
RRP9-201ENST00000232888 C8orf49Q96NF6 230 aa17.96■□□□□ 0.46
RRP9-201ENST00000232888 CITED2Q99967 270 aaPredicted RBP17.96■□□□□ 0.46
RRP9-201ENST00000232888 MS4A6AQ9H2W1 248 aa17.96■□□□□ 0.46
RRP9-201ENST00000232888 NAT8BQ9UHF3 227 aa17.96■□□□□ 0.46
RRP9-201ENST00000232888 IZUMO1RA6ND01 250 aa17.95■□□□□ 0.46
RRP9-201ENST00000232888 HAX1O00165 279 aa17.95■□□□□ 0.46
RRP9-201ENST00000232888 PAFAH1B2P68402 229 aa17.95■□□□□ 0.46
RRP9-201ENST00000232888 ERCC8Q13216 396 aa17.95■□□□□ 0.46
RRP9-201ENST00000232888 RAX2Q96IS3 184 aa17.95■□□□□ 0.46
RRP9-201ENST00000232888 CCL24O00175 119 aa17.94■□□□□ 0.46
RRP9-201ENST00000232888 DLX4Q92988 240 aaPredicted RBP17.94■□□□□ 0.46
RRP9-201ENST00000232888 TRGC2P03986 189 aa17.93■□□□□ 0.46
RRP9-201ENST00000232888 CRIP1P50238 77 aa17.93■□□□□ 0.46
RRP9-201ENST00000232888 Q8TAT8 98 aa17.93■□□□□ 0.46
RRP9-201ENST00000232888 IGKV3-7A0A075B6H7 116 aa17.92■□□□□ 0.46
RRP9-201ENST00000232888 TRAV2A0A0B4J234 112 aa17.92■□□□□ 0.46
RRP9-201ENST00000232888 K7EQG2 157 aa17.92■□□□□ 0.46
RRP9-201ENST00000232888 CA1P00915 261 aaPredicted RBP17.92■□□□□ 0.46
RRP9-201ENST00000232888 SNRPD3P62318 126 aaKnown RBP17.92■□□□□ 0.46
RRP9-201ENST00000232888 RASL11AQ6T310 242 aa17.92■□□□□ 0.46
RRP9-201ENST00000232888 ADAMTSL5Q6ZMM2 481 aa17.92■□□□□ 0.46
RRP9-201ENST00000232888 OR2D3Q8NGH3 330 aa17.92■□□□□ 0.46
RRP9-201ENST00000232888 SAV1Q9H4B6 383 aaPredicted RBP17.92■□□□□ 0.46
RRP9-201ENST00000232888 TRBV7-9A0A0J9YWB2 115 aa17.91■□□□□ 0.46
RRP9-201ENST00000232888 CSN3P07498 182 aa17.91■□□□□ 0.46
RRP9-201ENST00000232888 PRB4P10163 310 aaPredicted RBP17.91■□□□□ 0.46
RRP9-201ENST00000232888 SRSF2Q01130 221 aaKnown RBP17.91■□□□□ 0.46
RRP9-201ENST00000232888 NEU1Q99519 415 aa17.91■□□□□ 0.46
RRP9-201ENST00000232888 ASCL2Q99929 193 aa17.91■□□□□ 0.46
RRP9-201ENST00000232888 TCL1AP56279 114 aa17.91■□□□□ 0.46
RRP9-201ENST00000232888 ZFP82Q8N141 532 aa17.91■□□□□ 0.46
RRP9-201ENST00000232888 C11orf44Q8N8P7 122 aa17.91■□□□□ 0.46
RRP9-201ENST00000232888 DUX3Q96PT4 197 aa17.91■□□□□ 0.46
RRP9-201ENST00000232888 GPR61Q9BZJ8 451 aa17.91■□□□□ 0.46
RRP9-201ENST00000232888 XKRY2A2RUG3 117 aa17.9■□□□□ 0.46
RRP9-201ENST00000232888 PHOX2AO14813 284 aa17.9■□□□□ 0.46
RRP9-201ENST00000232888 SH2D1AO60880 128 aa17.9■□□□□ 0.46
RRP9-201ENST00000232888 FOXA3P55318 350 aaPredicted RBP17.9■□□□□ 0.46
RRP9-201ENST00000232888 ACTL10Q5JWF8 245 aa17.9■□□□□ 0.46
RRP9-201ENST00000232888 WDR73Q6P4I2 378 aa17.9■□□□□ 0.46
RRP9-201ENST00000232888 NUP35Q8NFH5 326 aa17.9■□□□□ 0.46
RRP9-201ENST00000232888 OR8A1Q8NGG7 326 aa17.9■□□□□ 0.46
RRP9-201ENST00000232888 A0A1W2PRX2 142 aa17.89■□□□□ 0.45
RRP9-201ENST00000232888 FABP5P3A8MUU1 101 aa17.89■□□□□ 0.45
RRP9-201ENST00000232888 HIGD1CA8MV81 97 aa17.89■□□□□ 0.45
RRP9-201ENST00000232888 RPS20P60866 119 aaKnown RBP17.89■□□□□ 0.45
RRP9-201ENST00000232888 ATP5L2Q7Z4Y8 100 aa17.89■□□□□ 0.45
RRP9-201ENST00000232888 SIGLEC8Q9NYZ4 499 aa17.89■□□□□ 0.45
RRP9-201ENST00000232888 Q6AWC8 147 aa17.88■□□□□ 0.45
RRP9-201ENST00000232888 WFDC3Q8IUB2 231 aa17.88■□□□□ 0.45
RRP9-201ENST00000232888 GNB1LQ9BYB4 327 aa17.88■□□□□ 0.45
RRP9-201ENST00000232888 LOC105371267A0A1B0GV96 52 aa17.87■□□□□ 0.45
RRP9-201ENST00000232888 MT-ND6P03923 174 aa17.87■□□□□ 0.45
RRP9-201ENST00000232888 RBPMS2Q6ZRY4 209 aaKnown RBP17.87■□□□□ 0.45
RRP9-201ENST00000232888 TRAPPC1Q9Y5R8 145 aa17.87■□□□□ 0.45
RRP9-201ENST00000232888 HIVEP1P15822 2718 aa17.87■□□□□ 0.45
RRP9-201ENST00000232888 TMEM189A5PLL7 270 aa17.87■□□□□ 0.45
RRP9-201ENST00000232888 S100A6P06703 90 aa17.87■□□□□ 0.45
RRP9-201ENST00000232888 HIST1H1AQ02539 215 aaPredicted RBP17.87■□□□□ 0.45
RRP9-201ENST00000232888 NDUFA11Q86Y39 141 aa17.87■□□□□ 0.45
RRP9-201ENST00000232888 DYNLRB2Q8TF09 96 aa17.87■□□□□ 0.45
RRP9-201ENST00000232888 FRZBQ92765 325 aa17.86■□□□□ 0.45
RRP9-201ENST00000232888 TRAV25A0A0B4J276 109 aa17.85■□□□□ 0.45
RRP9-201ENST00000232888 ZNF80P51504 273 aaPredicted RBP17.85■□□□□ 0.45
RRP9-201ENST00000232888 GTSF1Q8WW33 167 aa17.85■□□□□ 0.45
RRP9-201ENST00000232888 TFPI2P48307 235 aa17.84■□□□□ 0.45
RRP9-201ENST00000232888 DEFB114Q30KQ6 69 aa17.84■□□□□ 0.45
RRP9-201ENST00000232888 FAM19A4Q96LR4 140 aa17.84■□□□□ 0.45
RRP9-201ENST00000232888 SELENOKQ9Y6D0 94 aa17.84■□□□□ 0.45
RRP9-201ENST00000232888 ADARB2-AS1A8MUL3 147 aa17.83■□□□□ 0.45
RRP9-201ENST00000232888 HIST1H2BKO60814 126 aa17.83■□□□□ 0.45
RRP9-201ENST00000232888 HIST1H2BJP06899 126 aa17.83■□□□□ 0.45
RRP9-201ENST00000232888 TRGC1P0CF51 173 aa17.83■□□□□ 0.45
RRP9-201ENST00000232888 HIST1H2BOP23527 126 aa17.83■□□□□ 0.45
RRP9-201ENST00000232888 HIST1H2BBP33778 126 aa17.83■□□□□ 0.45
RRP9-201ENST00000232888 HIST1H2BDP58876 126 aa17.83■□□□□ 0.45
RRP9-201ENST00000232888 HIST1H2BCP62807 126 aa17.83■□□□□ 0.45
RRP9-201ENST00000232888 FABP9Q0Z7S8 132 aa17.83■□□□□ 0.45
RRP9-201ENST00000232888 HIST2H2BEQ16778 126 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms