RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 RBM12B-AS1Q9P1G2 102 aa6.62□□□□□ -1.35
SPARC-201ENST00000231061 GATA1P15976 413 aaPredicted RBP6.61□□□□□ -1.35
SPARC-201ENST00000231061 HOXA4Q00056 320 aaPredicted RBP6.61□□□□□ -1.35
SPARC-201ENST00000231061 ZNF497Q6ZNH5 498 aa6.61□□□□□ -1.35
SPARC-201ENST00000231061 WDR86Q86TI4 376 aa6.61□□□□□ -1.35
SPARC-201ENST00000231061 TAF15Q92804 592 aaKnown RBP eCLIP6.61□□□□□ -1.35
SPARC-201ENST00000231061 KLF13Q9Y2Y9 288 aaPredicted RBP6.61□□□□□ -1.35
SPARC-201ENST00000231061 AMMECR1Q9Y4X0 333 aaPredicted RBP6.61□□□□□ -1.35
SPARC-201ENST00000231061 BUB3O43684 328 aa6.61□□□□□ -1.35
SPARC-201ENST00000231061 SS18L1O75177 396 aaPredicted RBP6.61□□□□□ -1.35
SPARC-201ENST00000231061 TFF1P04155 84 aa6.61□□□□□ -1.35
SPARC-201ENST00000231061 FAM53AQ6NSI3 398 aaPredicted RBP6.61□□□□□ -1.35
SPARC-201ENST00000231061 IGF2BP2-AS1Q96M15 143 aa6.61□□□□□ -1.35
SPARC-201ENST00000231061 PRO0461Q9UI25 63 aa6.61□□□□□ -1.35
SPARC-201ENST00000231061 DMDP11532 3685 aa6.61□□□□□ -1.35
SPARC-201ENST00000231061 CEP295Q9C0D2 2601 aa6.61□□□□□ -1.35
SPARC-201ENST00000231061 ATP1A1-AS1Q5TC04 95 aa6.61□□□□□ -1.35
SPARC-201ENST00000231061 ZNF826PQ6ZT77 177 aa6.61□□□□□ -1.35
SPARC-201ENST00000231061 Q8IYB0 196 aa6.61□□□□□ -1.35
SPARC-201ENST00000231061 FXYD5Q96DB9 178 aa6.61□□□□□ -1.35
SPARC-201ENST00000231061 FMC1Q96HJ9 113 aa6.61□□□□□ -1.35
SPARC-201ENST00000231061 LINC00479Q96M42 142 aa6.61□□□□□ -1.35
SPARC-201ENST00000231061 RNF7Q9UBF6 113 aa6.61□□□□□ -1.35
SPARC-201ENST00000231061 IGHV3-43A0A0B4J1X8 118 aa6.6□□□□□ -1.35
SPARC-201ENST00000231061 H3BVH4 76 aa6.6□□□□□ -1.35
SPARC-201ENST00000231061 WNT9BO14905 357 aa6.6□□□□□ -1.35
SPARC-201ENST00000231061 IGLV2-14P01704 120 aa6.6□□□□□ -1.35
SPARC-201ENST00000231061 IGHV3-43DP0DP04 118 aa6.6□□□□□ -1.35
SPARC-201ENST00000231061 HERVK_113P61574 105 aa6.6□□□□□ -1.35
SPARC-201ENST00000231061 SERF2P84101 59 aa6.6□□□□□ -1.35
SPARC-201ENST00000231061 CIRBPQ14011 172 aaKnown RBP6.6□□□□□ -1.35
SPARC-201ENST00000231061 NHP2Q9NX24 153 aaKnown RBP6.6□□□□□ -1.35
SPARC-201ENST00000231061 SVILO95425 2214 aa6.6□□□□□ -1.35
SPARC-201ENST00000231061 CACNA1DQ01668 2161 aa6.6□□□□□ -1.35
SPARC-201ENST00000231061 TRGV11A0A075B6L2 103 aa6.6□□□□□ -1.35
SPARC-201ENST00000231061 MDFIC2A0A1B0GVS7 189 aa6.6□□□□□ -1.35
SPARC-201ENST00000231061 TMEM30CPA0ZSE6 113 aa6.6□□□□□ -1.35
SPARC-201ENST00000231061 TMEM258P61165 79 aa6.6□□□□□ -1.35
SPARC-201ENST00000231061 RPL23P62829 140 aaKnown RBP6.6□□□□□ -1.35
SPARC-201ENST00000231061 LOXL1Q08397 574 aaPredicted RBP6.6□□□□□ -1.35
SPARC-201ENST00000231061 SS18Q15532 418 aa6.6□□□□□ -1.35
SPARC-201ENST00000231061 RTL8BQ17RB0 113 aa6.6□□□□□ -1.35
SPARC-201ENST00000231061 HES3Q5TGS1 186 aa6.6□□□□□ -1.35
SPARC-201ENST00000231061 C11orf68Q9H3H3 251 aaKnown RBP6.6□□□□□ -1.35
SPARC-201ENST00000231061 PCSK5Q92824 1860 aa6.6□□□□□ -1.35
SPARC-201ENST00000231061 ESPL1Q14674 2120 aa6.6□□□□□ -1.35
SPARC-201ENST00000231061 ACACAQ13085 2346 aa6.6□□□□□ -1.35
SPARC-201ENST00000231061 TRGV5A0A0B4J1U4 118 aa6.6□□□□□ -1.35
SPARC-201ENST00000231061 FAM181BA6NEQ2 426 aa6.6□□□□□ -1.35
SPARC-201ENST00000231061 K7EMI3 77 aa6.6□□□□□ -1.35
SPARC-201ENST00000231061 TCL1BO95988 128 aa6.6□□□□□ -1.35
SPARC-201ENST00000231061 CNEP1R1Q8N9A8 125 aa6.6□□□□□ -1.35
SPARC-201ENST00000231061 RFESDQ8TAC1 157 aa6.6□□□□□ -1.35
SPARC-201ENST00000231061 SSMEM1Q8WWF3 244 aa6.6□□□□□ -1.35
SPARC-201ENST00000231061 HIGD1BQ9P298 99 aa6.6□□□□□ -1.35
SPARC-201ENST00000231061 FLNBO75369 2602 aaKnown RBP6.59□□□□□ -1.35
SPARC-201ENST00000231061 LINC01548A6NM66 108 aa6.59□□□□□ -1.35
SPARC-201ENST00000231061 KNCNA6PVL3 124 aa6.59□□□□□ -1.35
SPARC-201ENST00000231061 DEFB108AA8MXU0 73 aa6.59□□□□□ -1.35
SPARC-201ENST00000231061 RBMY1CP0DJD4 496 aa6.59□□□□□ -1.35
SPARC-201ENST00000231061 TMEM70Q9BUB7 260 aa6.59□□□□□ -1.35
SPARC-201ENST00000231061 C12orf77C9JDV5 145 aa6.59□□□□□ -1.35
SPARC-201ENST00000231061 M0R2P5 195 aa6.59□□□□□ -1.35
SPARC-201ENST00000231061 RPL30P62888 115 aaKnown RBP6.59□□□□□ -1.35
SPARC-201ENST00000231061 SPRNQ5BIV9 151 aa6.59□□□□□ -1.35
SPARC-201ENST00000231061 CEND1Q8N111 149 aa6.59□□□□□ -1.35
SPARC-201ENST00000231061 ZNF645Q8N7E2 425 aa6.59□□□□□ -1.35
SPARC-201ENST00000231061 TSKUQ8WUA8 353 aa6.59□□□□□ -1.35
SPARC-201ENST00000231061 SNURFLB1AK76 121 aa6.59□□□□□ -1.36
SPARC-201ENST00000231061 M0R1B8 84 aa6.59□□□□□ -1.36
SPARC-201ENST00000231061 IGKV1D-33P01593 117 aa6.59□□□□□ -1.36
SPARC-201ENST00000231061 IGKV1-33P01594 117 aa6.59□□□□□ -1.36
SPARC-201ENST00000231061 DEFA4P12838 97 aa6.59□□□□□ -1.36
SPARC-201ENST00000231061 TFF3Q07654 80 aa6.59□□□□□ -1.36
SPARC-201ENST00000231061 SP5Q6BEB4 398 aaPredicted RBP6.59□□□□□ -1.36
SPARC-201ENST00000231061 RPP25LQ8N5L8 163 aaKnown RBP6.59□□□□□ -1.36
SPARC-201ENST00000231061 SAP30LQ9HAJ7 183 aa6.59□□□□□ -1.36
SPARC-201ENST00000231061 SPRR3Q9UBC9 169 aa6.59□□□□□ -1.36
SPARC-201ENST00000231061 LINC00527Q9UJ94 153 aa6.59□□□□□ -1.36
SPARC-201ENST00000231061 TIMM8BQ9Y5J9 83 aaPredicted RBP6.59□□□□□ -1.36
SPARC-201ENST00000231061 A0A1W2PNU3 283 aaPredicted RBP6.58□□□□□ -1.36
SPARC-201ENST00000231061 A1L4Q6 167 aa6.58□□□□□ -1.36
SPARC-201ENST00000231061 C17orf98A8MV24 154 aa6.58□□□□□ -1.36
SPARC-201ENST00000231061 GYPAP02724 150 aa6.58□□□□□ -1.36
SPARC-201ENST00000231061 MPV17P39210 176 aa6.58□□□□□ -1.36
SPARC-201ENST00000231061 PAPPA-AS1Q5QFB9 102 aa6.58□□□□□ -1.36
SPARC-201ENST00000231061 S100A7L2Q5SY68 101 aa6.58□□□□□ -1.36
SPARC-201ENST00000231061 AGPAT4-IT1Q9H0P7 198 aa6.58□□□□□ -1.36
SPARC-201ENST00000231061 ATP5G1P05496 136 aa6.58□□□□□ -1.36
SPARC-201ENST00000231061 LINC00205P59089 165 aa6.58□□□□□ -1.36
SPARC-201ENST00000231061 C12orf74Q32Q52 190 aa6.58□□□□□ -1.36
SPARC-201ENST00000231061 CTXND1A0A1B0GTU2 59 aa6.58□□□□□ -1.36
SPARC-201ENST00000231061 COX8AP10176 69 aa6.58□□□□□ -1.36
SPARC-201ENST00000231061 COX5AP20674 150 aa6.58□□□□□ -1.36
SPARC-201ENST00000231061 CEMP1Q6PRD7 247 aaPredicted RBP6.58□□□□□ -1.36
SPARC-201ENST00000231061 RNF182Q8N6D2 247 aa6.58□□□□□ -1.36
SPARC-201ENST00000231061 FAM57AQ8TBR7 257 aa6.58□□□□□ -1.36
SPARC-201ENST00000231061 TRAV2A0A0B4J234 112 aa6.57□□□□□ -1.36
SPARC-201ENST00000231061 PLAC8L1A1L4L8 177 aa6.57□□□□□ -1.36
SPARC-201ENST00000231061 MGST3O14880 152 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms