RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 FHL3Q13643 280 aa11.06□□□□□ -0.64
SF1-201ENST00000227503 GAGE13Q4V321 117 aa11.06□□□□□ -0.64
SF1-201ENST00000227503 IGFL4Q6B9Z1 124 aa11.06□□□□□ -0.64
SF1-201ENST00000227503 SYT8Q8NBV8 401 aa11.06□□□□□ -0.64
SF1-201ENST00000227503 Q8TAT8 98 aa11.06□□□□□ -0.64
SF1-201ENST00000227503 CCL17Q92583 94 aa11.06□□□□□ -0.64
SF1-201ENST00000227503 ACACAQ13085 2346 aa11.06□□□□□ -0.64
SF1-201ENST00000227503 TRAV40A0A0B4J280 105 aa11.05□□□□□ -0.64
SF1-201ENST00000227503 NPIPB5A8MRT5 1133 aa11.05□□□□□ -0.64
SF1-201ENST00000227503 F8W1H4 67 aa11.05□□□□□ -0.64
SF1-201ENST00000227503 NDUFB3O43676 98 aa11.05□□□□□ -0.64
SF1-201ENST00000227503 C12orf74Q32Q52 190 aa11.05□□□□□ -0.64
SF1-201ENST00000227503 TMEM8BA6NDV4 472 aa11.05□□□□□ -0.64
SF1-201ENST00000227503 LOXP28300 417 aaPredicted RBP11.05□□□□□ -0.64
SF1-201ENST00000227503 PTH2Q96A98 100 aa11.05□□□□□ -0.64
SF1-201ENST00000227503 TRGV9Q99603 122 aa11.05□□□□□ -0.64
SF1-201ENST00000227503 APC2O95996 2303 aa11.04□□□□□ -0.64
SF1-201ENST00000227503 MC5RP33032 325 aa11.04□□□□□ -0.64
SF1-201ENST00000227503 IGKV2-40A0A087WW87 121 aaPredicted RBP11.04□□□□□ -0.64
SF1-201ENST00000227503 SH2D1AO60880 128 aa11.04□□□□□ -0.64
SF1-201ENST00000227503 IGKV2D-40P01614 121 aaPredicted RBP11.04□□□□□ -0.64
SF1-201ENST00000227503 CRYGCP07315 174 aa11.04□□□□□ -0.64
SF1-201ENST00000227503 PVRIGQ6DKI7 326 aa11.04□□□□□ -0.64
SF1-201ENST00000227503 NBASA2RRP1 2371 aa11.03□□□□□ -0.64
SF1-201ENST00000227503 APOMO95445 188 aa11.03□□□□□ -0.64
SF1-201ENST00000227503 IGKCP01834 107 aa11.03□□□□□ -0.64
SF1-201ENST00000227503 VMA21Q3ZAQ7 101 aa11.03□□□□□ -0.64
SF1-201ENST00000227503 ZNF493Q6ZR52 646 aa11.03□□□□□ -0.64
SF1-201ENST00000227503 IGFBPL1Q8WX77 278 aa11.03□□□□□ -0.64
SF1-201ENST00000227503 MRAP2Q96G30 205 aa11.03□□□□□ -0.64
SF1-201ENST00000227503 SRSF8Q9BRL6 282 aaKnown RBP11.03□□□□□ -0.64
SF1-201ENST00000227503 SS18L2Q9UHA2 77 aa11.03□□□□□ -0.64
SF1-201ENST00000227503 CT45A10P0DMU9 189 aa11.03□□□□□ -0.64
SF1-201ENST00000227503 TMEM155Q4W5P6 130 aa11.03□□□□□ -0.64
SF1-201ENST00000227503 SIGLEC15Q6ZMC9 328 aa11.03□□□□□ -0.64
SF1-201ENST00000227503 HIST1H4GQ99525 98 aa11.03□□□□□ -0.64
SF1-201ENST00000227503 PRO0461Q9UI25 63 aa11.03□□□□□ -0.64
SF1-201ENST00000227503 U3KQK5 164 aa11.03□□□□□ -0.64
SF1-201ENST00000227503 SPINK8P0C7L1 97 aa11.02□□□□□ -0.64
SF1-201ENST00000227503 HOXB4P17483 251 aaPredicted RBP11.02□□□□□ -0.64
SF1-201ENST00000227503 TRBV19A0A075B6N1 114 aa11.02□□□□□ -0.65
SF1-201ENST00000227503 TGFAP01135 160 aa11.02□□□□□ -0.65
SF1-201ENST00000227503 GATD1Q8NB37 220 aa11.02□□□□□ -0.65
SF1-201ENST00000227503 TMEM158Q8WZ71 300 aa11.02□□□□□ -0.65
SF1-201ENST00000227503 NGBQ9NPG2 151 aa11.02□□□□□ -0.65
SF1-201ENST00000227503 MRPL35Q9NZE8 188 aaKnown RBP11.02□□□□□ -0.65
SF1-201ENST00000227503 NDUFA3O95167 84 aa11.02□□□□□ -0.65
SF1-201ENST00000227503 IGHV1-8P0DP01 117 aa11.02□□□□□ -0.65
SF1-201ENST00000227503 EGR2P11161 476 aaPredicted RBP11.02□□□□□ -0.65
SF1-201ENST00000227503 NFE4Q86UQ8 179 aa11.02□□□□□ -0.65
SF1-201ENST00000227503 RNF183Q96D59 192 aa11.02□□□□□ -0.65
SF1-201ENST00000227503 KAAG1Q9UBP8 84 aa11.02□□□□□ -0.65
SF1-201ENST00000227503 ZNF80P51504 273 aaPredicted RBP11.01□□□□□ -0.65
SF1-201ENST00000227503 C8orf86Q6ZUL3 223 aa11.01□□□□□ -0.65
SF1-201ENST00000227503 ASCL5Q7RTU5 278 aa11.01□□□□□ -0.65
SF1-201ENST00000227503 ZNF418Q8TF45 676 aaPredicted RBP11.01□□□□□ -0.65
SF1-201ENST00000227503 RNASE6Q93091 150 aaKnown RBP11.01□□□□□ -0.65
SF1-201ENST00000227503 TM2D2Q9BX73 214 aa11.01□□□□□ -0.65
SF1-201ENST00000227503 CDIP1Q9H305 208 aa11.01□□□□□ -0.65
SF1-201ENST00000227503 RPL27AP46776 148 aaKnown RBP11.01□□□□□ -0.65
SF1-201ENST00000227503 HIGD1BQ9P298 99 aa11.01□□□□□ -0.65
SF1-201ENST00000227503 XGP55808 180 aa11□□□□□ -0.65
SF1-201ENST00000227503 TCTEX1D4Q5JR98 221 aa11□□□□□ -0.65
SF1-201ENST00000227503 RASL11BQ9BPW5 248 aa11□□□□□ -0.65
SF1-201ENST00000227503 LRBAP50851 2863 aa11□□□□□ -0.65
SF1-201ENST00000227503 ARHGAP32A7KAX9 2087 aa11□□□□□ -0.65
SF1-201ENST00000227503 IGHV3OR16-8A0A075B7F1 116 aa11□□□□□ -0.65
SF1-201ENST00000227503 CRYGBP07316 175 aa11□□□□□ -0.65
SF1-201ENST00000227503 SMCPP49901 116 aaPredicted RBP11□□□□□ -0.65
SF1-201ENST00000227503 ZNF48Q96MX3 618 aaPredicted RBP11□□□□□ -0.65
SF1-201ENST00000227503 HLA-DMBP28068 263 aa10.99□□□□□ -0.65
SF1-201ENST00000227503 KLF17Q5JT82 389 aaPredicted RBP10.99□□□□□ -0.65
SF1-201ENST00000227503 CYSLTR1Q9Y271 337 aa10.99□□□□□ -0.65
SF1-201ENST00000227503 IGKV1-17P01599 117 aa10.99□□□□□ -0.65
SF1-201ENST00000227503 EFNA4P52798 201 aa10.99□□□□□ -0.65
SF1-201ENST00000227503 RRN3P1Q2M238 152 aa10.99□□□□□ -0.65
SF1-201ENST00000227503 MAP1LC3AQ9H492 121 aa10.99□□□□□ -0.65
SF1-201ENST00000227503 MRPL16Q9NX20 251 aaKnown RBP10.99□□□□□ -0.65
SF1-201ENST00000227503 DCHS2Q6V1P9 2916 aa10.99□□□□□ -0.65
SF1-201ENST00000227503 TRAV26-2A0A0B4J265 109 aa10.99□□□□□ -0.65
SF1-201ENST00000227503 A0A1B0GW15 77 aa10.99□□□□□ -0.65
SF1-201ENST00000227503 IL4P05112 153 aa10.99□□□□□ -0.65
SF1-201ENST00000227503 ANXA2RQ3ZCQ2 193 aa10.99□□□□□ -0.65
SF1-201ENST00000227503 PRSS33Q8NF86 280 aa10.99□□□□□ -0.65
SF1-201ENST00000227503 RNF185Q96GF1 192 aa10.99□□□□□ -0.65
SF1-201ENST00000227503 ZMAT4Q9H898 229 aa10.99□□□□□ -0.65
SF1-201ENST00000227503 SHISA9B4DS77 424 aa10.98□□□□□ -0.65
SF1-201ENST00000227503 E7EQL1 145 aa10.98□□□□□ -0.65
SF1-201ENST00000227503 DPM2O94777 84 aa10.98□□□□□ -0.65
SF1-201ENST00000227503 FOXI1Q12951 378 aa10.98□□□□□ -0.65
SF1-201ENST00000227503 SPTA1P02549 2419 aa10.98□□□□□ -0.65
SF1-201ENST00000227503 TNFRSF6BO95407 300 aa10.98□□□□□ -0.65
SF1-201ENST00000227503 KLK15Q9H2R5 256 aa10.98□□□□□ -0.65
SF1-201ENST00000227503 ORM1P02763 201 aa10.97□□□□□ -0.65
SF1-201ENST00000227503 FBXL15Q9H469 300 aa10.97□□□□□ -0.65
SF1-201ENST00000227503 PGPEP1Q9NXJ5 209 aa10.97□□□□□ -0.65
SF1-201ENST00000227503 SIGLEC9Q9Y336 463 aa10.97□□□□□ -0.65
SF1-201ENST00000227503 IGLV1-47P01700 117 aa10.97□□□□□ -0.65
SF1-201ENST00000227503 ZFP2Q6ZN57 461 aa10.97□□□□□ -0.65
SF1-201ENST00000227503 TTC9CQ8N5M4 171 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms