RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 ZFHX2Q9C0A1 2572 aaPredicted RBP15.11■□□□□ 0.01
SMPD3-201ENST00000219334 ANK1P16157 1881 aa15.11■□□□□ 0.01
SMPD3-201ENST00000219334 ZNF492Q9P255 531 aa15.11■□□□□ 0.01
SMPD3-201ENST00000219334 KLF2Q9Y5W3 355 aaPredicted RBP15.11■□□□□ 0.01
SMPD3-201ENST00000219334 KLF12Q9Y4X4 402 aa15.1■□□□□ 0.01
SMPD3-201ENST00000219334 WT1P19544 449 aaPredicted RBP15.1■□□□□ 0.01
SMPD3-201ENST00000219334 C8orf49Q96NF6 230 aa15.1■□□□□ 0.01
SMPD3-201ENST00000219334 C22orf46C9J442 243 aa15.1■□□□□ 0.01
SMPD3-201ENST00000219334 K7EM74 188 aa15.1■□□□□ 0.01
SMPD3-201ENST00000219334 IGF2-ASQ6U949 168 aa15.1■□□□□ 0.01
SMPD3-201ENST00000219334 MEGF9Q9H1U4 602 aa15.1■□□□□ 0.01
SMPD3-201ENST00000219334 BDP1A6H8Y1 2624 aa15.09■□□□□ 0.01
SMPD3-201ENST00000219334 SLAQ13239 276 aa15.09■□□□□ 0.01
SMPD3-201ENST00000219334 LURAP1LQ8IV03 231 aa15.09■□□□□ 0.01
SMPD3-201ENST00000219334 TPSG1Q9NRR2 321 aa15.09■□□□□ 0.01
SMPD3-201ENST00000219334 TP53TG1Q9Y2A0 90 aa15.09■□□□□ 0.01
SMPD3-201ENST00000219334 MMP23AO75900 390 aa15.09■□□□□ 0.01
SMPD3-201ENST00000219334 DNAJC30Q96LL9 226 aa15.09■□□□□ 0.01
SMPD3-201ENST00000219334 C15orf65H3BRN8 121 aa15.09■□□□□ 0.01
SMPD3-201ENST00000219334 LYL1P12980 280 aa15.08■□□□□ 0.01
SMPD3-201ENST00000219334 WT1-ASQ06250 92 aa15.08■□□□□ 0.01
SMPD3-201ENST00000219334 ANXA2RQ3ZCQ2 193 aa15.08■□□□□ 0.01
SMPD3-201ENST00000219334 CCL24O00175 119 aa15.08■□□□□ 0
SMPD3-201ENST00000219334 GAGE6Q13070 117 aa15.08■□□□□ 0
SMPD3-201ENST00000219334 PTPRQQ9UMZ3 2332 aa15.08■□□□□ 0
SMPD3-201ENST00000219334 TP53BP1Q12888 1972 aaPredicted RBP15.08■□□□□ 0
SMPD3-201ENST00000219334 TMEM213A2RRL7 107 aa15.08■□□□□ 0
SMPD3-201ENST00000219334 PRSS46E5RG02 174 aa15.08■□□□□ 0
SMPD3-201ENST00000219334 H3BRN7 92 aa15.08■□□□□ 0
SMPD3-201ENST00000219334 IGHV2-70P01814 119 aa15.08■□□□□ 0
SMPD3-201ENST00000219334 CFPP27918 469 aa15.08■□□□□ 0
SMPD3-201ENST00000219334 MED13LQ71F56 2210 aa15.08■□□□□ 0
SMPD3-201ENST00000219334 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.07■□□□□ 0
SMPD3-201ENST00000219334 THAP8Q8NA92 274 aa15.07■□□□□ 0
SMPD3-201ENST00000219334 FAM231BA6NCW3 169 aa15.07■□□□□ 0
SMPD3-201ENST00000219334 HOXB4P17483 251 aaPredicted RBP15.07■□□□□ 0
SMPD3-201ENST00000219334 ZNF625Q96I27 306 aaPredicted RBP15.07■□□□□ 0
SMPD3-201ENST00000219334 ATP6V0BQ99437 205 aa15.07■□□□□ 0
SMPD3-201ENST00000219334 TMEM126AQ9H061 195 aa15.07■□□□□ 0
SMPD3-201ENST00000219334 PMVKQ15126 192 aa15.07■□□□□ 0
SMPD3-201ENST00000219334 HIST3H2BBQ8N257 126 aa15.07■□□□□ 0
SMPD3-201ENST00000219334 TMEM141Q96I45 108 aa15.06■□□□□ 0
SMPD3-201ENST00000219334 IGF2BP2-AS1Q96M15 143 aa15.06■□□□□ 0
SMPD3-201ENST00000219334 A0A1B0GUS0 222 aa15.06■□□□□ 0
SMPD3-201ENST00000219334 SYS1-DBNDD2H3BUS1 97 aa15.06■□□□□ 0
SMPD3-201ENST00000219334 DIAPH2-AS1Q14236 149 aa15.06■□□□□ 0
SMPD3-201ENST00000219334 IGFL2Q6UWQ7 119 aa15.06■□□□□ 0
SMPD3-201ENST00000219334 PLXNA3P51805 1871 aa15.06■□□□□ 0
SMPD3-201ENST00000219334 IGHV4-61A0A0C4DH41 118 aa15.06■□□□□ 0
SMPD3-201ENST00000219334 SDHAF1A6NFY7 115 aa15.06■□□□□ 0
SMPD3-201ENST00000219334 C2orf66Q6UXQ4 117 aa15.06■□□□□ 0
SMPD3-201ENST00000219334 PRR25Q96S07 402 aa15.06■□□□□ 0
SMPD3-201ENST00000219334 SPAG8Q99932 426 aaPredicted RBP15.06■□□□□ 0
SMPD3-201ENST00000219334 ESDP10768 282 aa15.06■□□□□ 0
SMPD3-201ENST00000219334 RPL32P62910 135 aaKnown RBP15.05■□□□□ 0
SMPD3-201ENST00000219334 CHAC1Q9BUX1 264 aa15.05■□□□□ 0
SMPD3-201ENST00000219334 TMEM14CQ9P0S9 112 aa15.05■□□□□ 0
SMPD3-201ENST00000219334 VWC2LB2RUY7 222 aa15.05■□□□□ -0
SMPD3-201ENST00000219334 ZNF134P52741 427 aa15.05■□□□□ -0
SMPD3-201ENST00000219334 hDV102S1A0JD36 115 aa15.05■□□□□ -0
SMPD3-201ENST00000219334 COLCA2A8K830 154 aa15.05■□□□□ -0
SMPD3-201ENST00000219334 C9orf66Q5T8R8 295 aa15.05■□□□□ -0
SMPD3-201ENST00000219334 HOXD3P31249 432 aaPredicted RBP15.04■□□□□ -0
SMPD3-201ENST00000219334 GBF1Q92538 1859 aa15.04■□□□□ -0
SMPD3-201ENST00000219334 SNHG12Q9BXW3 62 aa15.04■□□□□ -0
SMPD3-201ENST00000219334 IGHV3-38A0A0C4DH36 116 aa15.04■□□□□ -0
SMPD3-201ENST00000219334 PFN2P35080 140 aa15.04■□□□□ -0
SMPD3-201ENST00000219334 CT83Q5H943 113 aa15.04■□□□□ -0
SMPD3-201ENST00000219334 TMEM256Q8N2U0 113 aa15.04■□□□□ -0
SMPD3-201ENST00000219334 UBE2CO00762 179 aa15.04■□□□□ -0
SMPD3-201ENST00000219334 C3orf79P0CE67 100 aa15.04■□□□□ -0
SMPD3-201ENST00000219334 C2orf82Q6UX34 121 aa15.04■□□□□ -0
SMPD3-201ENST00000219334 IGHV4-30-2A0A087WSY4 118 aa15.04■□□□□ -0
SMPD3-201ENST00000219334 NOTCH2Q04721 2471 aa15.04■□□□□ -0
SMPD3-201ENST00000219334 TTC28Q96AY4 2481 aa15.04■□□□□ -0
SMPD3-201ENST00000219334 FAM104BQ5XKR9 115 aa15.03■□□□□ -0
SMPD3-201ENST00000219334 NEGR1Q7Z3B1 354 aa15.03■□□□□ -0
SMPD3-201ENST00000219334 HIST1H4AP62805 103 aaKnown RBP15.03■□□□□ -0
SMPD3-201ENST00000219334 C1orf147Q96MC9 270 aaPredicted RBP15.03■□□□□ -0
SMPD3-201ENST00000219334 A0A096LPF7 62 aa15.03■□□□□ -0
SMPD3-201ENST00000219334 ANGP03950 147 aaKnown RBP15.03■□□□□ -0
SMPD3-201ENST00000219334 FOXI2Q6ZQN5 318 aa15.03■□□□□ -0
SMPD3-201ENST00000219334 IGLC1P0CG04 106 aa15.02■□□□□ -0
SMPD3-201ENST00000219334 MALRD1Q5VYJ5 2156 aa15.02□□□□□ -0.01
SMPD3-201ENST00000219334 KLF5Q13887 457 aaPredicted RBP15.02□□□□□ -0.01
SMPD3-201ENST00000219334 RSPO1Q2MKA7 263 aaPredicted RBP15.02□□□□□ -0.01
SMPD3-201ENST00000219334 C8orf31Q8N9H6 132 aa15.02□□□□□ -0.01
SMPD3-201ENST00000219334 CTSZQ9UBR2 303 aa15.02□□□□□ -0.01
SMPD3-201ENST00000219334 Q8N8P6 123 aa15.02□□□□□ -0.01
SMPD3-201ENST00000219334 TRAV8-3A0A0A6YYJ7 113 aa15.01□□□□□ -0.01
SMPD3-201ENST00000219334 HLA-DRB4P13762 266 aa15.01□□□□□ -0.01
SMPD3-201ENST00000219334 ZNF114Q8NC26 417 aa15.01□□□□□ -0.01
SMPD3-201ENST00000219334 HLA-DRB4X5D2U9 266 aa15.01□□□□□ -0.01
SMPD3-201ENST00000219334 PCNX2A6NKB5 2137 aa15.01□□□□□ -0.01
SMPD3-201ENST00000219334 GTF3C1Q12789 2109 aa15.01□□□□□ -0.01
SMPD3-201ENST00000219334 ARTNQ5T4W7 220 aa15.01□□□□□ -0.01
SMPD3-201ENST00000219334 ZNF524Q96C55 264 aa15.01□□□□□ -0.01
SMPD3-201ENST00000219334 CENPVL3A0A0U1RRI6 287 aa15□□□□□ -0.01
SMPD3-201ENST00000219334 RHOHQ15669 191 aa15□□□□□ -0.01
SMPD3-201ENST00000219334 MGAMO43451 1857 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms