RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 CMC4P56277 68 aaPredicted RBP12.03□□□□□ -0.48
NDFIP2-201ENST00000218652 TSSC4Q9Y5U2 329 aaPredicted RBP12.03□□□□□ -0.48
NDFIP2-201ENST00000218652 DSCAML1Q8TD84 2053 aa12.02□□□□□ -0.48
NDFIP2-201ENST00000218652 TRBV19A0A075B6N1 114 aa12.02□□□□□ -0.48
NDFIP2-201ENST00000218652 SDHAF1A6NFY7 115 aa12.02□□□□□ -0.48
NDFIP2-201ENST00000218652 NDUFA4L2Q9NRX3 87 aa12.02□□□□□ -0.48
NDFIP2-201ENST00000218652 LCTP09848 1927 aa12.02□□□□□ -0.48
NDFIP2-201ENST00000218652 SBF1O95248 1867 aa12.02□□□□□ -0.49
NDFIP2-201ENST00000218652 PDCD11Q14690 1871 aaKnown RBP12.02□□□□□ -0.49
NDFIP2-201ENST00000218652 GAGE12JA6NER3 117 aa12.02□□□□□ -0.49
NDFIP2-201ENST00000218652 GAGE1Q13065 139 aa12.02□□□□□ -0.49
NDFIP2-201ENST00000218652 GAGE4Q13068 117 aa12.02□□□□□ -0.49
NDFIP2-201ENST00000218652 GAGE5Q13069 117 aa12.02□□□□□ -0.49
NDFIP2-201ENST00000218652 C1QTNF4Q9BXJ3 329 aa12.02□□□□□ -0.49
NDFIP2-201ENST00000218652 IGHV2-5P01817 119 aa12.02□□□□□ -0.49
NDFIP2-201ENST00000218652 GNLYP22749 145 aa12.02□□□□□ -0.49
NDFIP2-201ENST00000218652 IGHG3P01860 377 aa12.01□□□□□ -0.49
NDFIP2-201ENST00000218652 DUX4L9Q6RFH8 374 aaPredicted RBP12.01□□□□□ -0.49
NDFIP2-201ENST00000218652 NEGR1Q7Z3B1 354 aa12.01□□□□□ -0.49
NDFIP2-201ENST00000218652 ZNF492Q9P255 531 aa12.01□□□□□ -0.49
NDFIP2-201ENST00000218652 MYLKQ15746 1914 aa12.01□□□□□ -0.49
NDFIP2-201ENST00000218652 TRAV26-2A0A0B4J265 109 aa12.01□□□□□ -0.49
NDFIP2-201ENST00000218652 TCF15Q12870 199 aa12.01□□□□□ -0.49
NDFIP2-201ENST00000218652 LOC285556D6RIA3 1793 aa12.01□□□□□ -0.49
NDFIP2-201ENST00000218652 LMO1P25800 156 aa12.01□□□□□ -0.49
NDFIP2-201ENST00000218652 YPEL3P61236 119 aaPredicted RBP12.01□□□□□ -0.49
NDFIP2-201ENST00000218652 WT1-ASQ06250 92 aa12.01□□□□□ -0.49
NDFIP2-201ENST00000218652 MRPL51Q4U2R6 128 aaKnown RBP12.01□□□□□ -0.49
NDFIP2-201ENST00000218652 DEFB121Q5J5C9 76 aa12.01□□□□□ -0.49
NDFIP2-201ENST00000218652 TRPT1Q86TN4 253 aaKnown RBP12.01□□□□□ -0.49
NDFIP2-201ENST00000218652 MRPL35Q9NZE8 188 aaKnown RBP12.01□□□□□ -0.49
NDFIP2-201ENST00000218652 KLK9Q9UKQ9 250 aa12.01□□□□□ -0.49
NDFIP2-201ENST00000218652 V9GYV3 84 aa12.01□□□□□ -0.49
NDFIP2-201ENST00000218652 CFHR3Q02985 330 aa12.01□□□□□ -0.49
NDFIP2-201ENST00000218652 C10orf91Q5T1B1 145 aa12.01□□□□□ -0.49
NDFIP2-201ENST00000218652 Q6ZR03 302 aa12□□□□□ -0.49
NDFIP2-201ENST00000218652 VOPP1Q96AW1 172 aa12□□□□□ -0.49
NDFIP2-201ENST00000218652 PRR25Q96S07 402 aa12□□□□□ -0.49
NDFIP2-201ENST00000218652 K7EP13 123 aa12□□□□□ -0.49
NDFIP2-201ENST00000218652 SS18Q15532 418 aa12□□□□□ -0.49
NDFIP2-201ENST00000218652 ARTNQ5T4W7 220 aa12□□□□□ -0.49
NDFIP2-201ENST00000218652 AMTNQ6UX39 209 aa12□□□□□ -0.49
NDFIP2-201ENST00000218652 CITED2Q99967 270 aaPredicted RBP12□□□□□ -0.49
NDFIP2-201ENST00000218652 SIP14410 1827 aa12□□□□□ -0.49
NDFIP2-201ENST00000218652 F8WEM9 126 aa12□□□□□ -0.49
NDFIP2-201ENST00000218652 CT83Q5H943 113 aa12□□□□□ -0.49
NDFIP2-201ENST00000218652 C9orf153Q5TBE3 101 aa12□□□□□ -0.49
NDFIP2-201ENST00000218652 PLXNA1Q9UIW2 1896 aa12□□□□□ -0.49
NDFIP2-201ENST00000218652 NRXN2Q9P2S2 1712 aa12□□□□□ -0.49
NDFIP2-201ENST00000218652 PRSS46E5RG02 174 aa11.99□□□□□ -0.49
NDFIP2-201ENST00000218652 NXPH4O95158 308 aa11.99□□□□□ -0.49
NDFIP2-201ENST00000218652 DSCR9P59020 149 aa11.99□□□□□ -0.49
NDFIP2-201ENST00000218652 RUSC1-AS1Q66K80 236 aa11.99□□□□□ -0.49
NDFIP2-201ENST00000218652 MAPK1IP1LQ8NDC0 245 aa11.99□□□□□ -0.49
NDFIP2-201ENST00000218652 ZNF524Q96C55 264 aa11.99□□□□□ -0.49
NDFIP2-201ENST00000218652 FAM223BA6NKX1 122 aa11.99□□□□□ -0.49
NDFIP2-201ENST00000218652 FAM223AQ8IWN6 122 aa11.99□□□□□ -0.49
NDFIP2-201ENST00000218652 SSC4DQ8WTU2 575 aa11.99□□□□□ -0.49
NDFIP2-201ENST00000218652 TCF20Q9UGU0 1960 aaKnown RBP11.99□□□□□ -0.49
NDFIP2-201ENST00000218652 EML6Q6ZMW3 1958 aa11.99□□□□□ -0.49
NDFIP2-201ENST00000218652 PMVKQ15126 192 aa11.99□□□□□ -0.49
NDFIP2-201ENST00000218652 UBE2DNLQ8IWF7 75 aa11.99□□□□□ -0.49
NDFIP2-201ENST00000218652 C9orf118A6NHY6 69 aa11.99□□□□□ -0.49
NDFIP2-201ENST00000218652 FGF6P10767 208 aa11.99□□□□□ -0.49
NDFIP2-201ENST00000218652 DTX1Q86Y01 620 aa11.99□□□□□ -0.49
NDFIP2-201ENST00000218652 THSD7AQ9UPZ6 1657 aa11.98□□□□□ -0.49
NDFIP2-201ENST00000218652 IGHV1-24A0A0C4DH33 117 aa11.98□□□□□ -0.49
NDFIP2-201ENST00000218652 TRBV20-1A0A075B6N2 111 aa11.98□□□□□ -0.49
NDFIP2-201ENST00000218652 IGHV3-38A0A0C4DH36 116 aa11.98□□□□□ -0.49
NDFIP2-201ENST00000218652 CFPP27918 469 aa11.98□□□□□ -0.49
NDFIP2-201ENST00000218652 Q8N8P6 123 aa11.98□□□□□ -0.49
NDFIP2-201ENST00000218652 WDR81Q562E7 1941 aa11.98□□□□□ -0.49
NDFIP2-201ENST00000218652 H3BMG7 143 aa11.98□□□□□ -0.49
NDFIP2-201ENST00000218652 TMEM75Q8N9X5 138 aa11.98□□□□□ -0.49
NDFIP2-201ENST00000218652 SRSF8Q9BRL6 282 aaKnown RBP11.98□□□□□ -0.49
NDFIP2-201ENST00000218652 TRAV12-2A0A075B6T6 113 aa11.98□□□□□ -0.49
NDFIP2-201ENST00000218652 MMP23AO75900 390 aa11.98□□□□□ -0.49
NDFIP2-201ENST00000218652 TPSG1Q9NRR2 321 aa11.98□□□□□ -0.49
NDFIP2-201ENST00000218652 SIGLEC8Q9NYZ4 499 aa11.98□□□□□ -0.49
NDFIP2-201ENST00000218652 TLN2Q9Y4G6 2542 aa11.97□□□□□ -0.49
NDFIP2-201ENST00000218652 H3BMM0 161 aa11.97□□□□□ -0.49
NDFIP2-201ENST00000218652 PSCAO43653 123 aa11.97□□□□□ -0.49
NDFIP2-201ENST00000218652 CDK2AP2O75956 126 aa11.97□□□□□ -0.49
NDFIP2-201ENST00000218652 HAMPP81172 84 aa11.97□□□□□ -0.49
NDFIP2-201ENST00000218652 UBE2WQ96B02 151 aa11.97□□□□□ -0.49
NDFIP2-201ENST00000218652 TANC1Q9C0D5 1861 aa11.97□□□□□ -0.49
NDFIP2-201ENST00000218652 NPYP01303 97 aa11.97□□□□□ -0.49
NDFIP2-201ENST00000218652 RSPO1Q2MKA7 263 aaPredicted RBP11.97□□□□□ -0.49
NDFIP2-201ENST00000218652 OVOL2Q9BRP0 275 aa11.97□□□□□ -0.49
NDFIP2-201ENST00000218652 NDUFA12Q9UI09 145 aa11.97□□□□□ -0.49
NDFIP2-201ENST00000218652 RHODO00212 210 aa11.96□□□□□ -0.49
NDFIP2-201ENST00000218652 SOCS3O14543 225 aa11.96□□□□□ -0.49
NDFIP2-201ENST00000218652 COX8AP10176 69 aa11.96□□□□□ -0.49
NDFIP2-201ENST00000218652 WDR86Q86TI4 376 aa11.96□□□□□ -0.49
NDFIP2-201ENST00000218652 ANXA2RQ3ZCQ2 193 aa11.96□□□□□ -0.49
NDFIP2-201ENST00000218652 PPDPFLQ8WWR9 84 aa11.96□□□□□ -0.49
NDFIP2-201ENST00000218652 NAV2Q8IVL1 2488 aa11.96□□□□□ -0.49
NDFIP2-201ENST00000218652 PIEZO1Q92508 2521 aa11.96□□□□□ -0.49
NDFIP2-201ENST00000218652 WIPF3A6NGB9 483 aa11.96□□□□□ -0.5
NDFIP2-201ENST00000218652 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms