RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 SMPXQ9UHP9 88 aa13.27□□□□□ -0.28
VRK1-201ENST00000216639 CELSR1Q9NYQ6 3014 aa13.27□□□□□ -0.28
VRK1-201ENST00000216639 RPS20P60866 119 aaKnown RBP13.27□□□□□ -0.29
VRK1-201ENST00000216639 ERCC8Q13216 396 aa13.27□□□□□ -0.29
VRK1-201ENST00000216639 BAGE3Q86Y29 109 aa13.27□□□□□ -0.29
VRK1-201ENST00000216639 RNF152Q8N8N0 203 aa13.27□□□□□ -0.29
VRK1-201ENST00000216639 BORCS7Q96B45 105 aa13.27□□□□□ -0.29
VRK1-201ENST00000216639 NRN1Q9NPD7 142 aa13.27□□□□□ -0.29
VRK1-201ENST00000216639 AMBPP02760 352 aa13.26□□□□□ -0.29
VRK1-201ENST00000216639 GZMBP10144 247 aa13.26□□□□□ -0.29
VRK1-201ENST00000216639 OR10J3Q5JRS4 329 aa13.26□□□□□ -0.29
VRK1-201ENST00000216639 SAMD13Q5VXD3 122 aa13.26□□□□□ -0.29
VRK1-201ENST00000216639 DUX5Q96PT3 197 aa13.26□□□□□ -0.29
VRK1-201ENST00000216639 A8MWP6 167 aa13.25□□□□□ -0.29
VRK1-201ENST00000216639 HAX1O00165 279 aa13.25□□□□□ -0.29
VRK1-201ENST00000216639 ZNF138P52744 262 aa13.25□□□□□ -0.29
VRK1-201ENST00000216639 RIGQ13278 110 aa13.25□□□□□ -0.29
VRK1-201ENST00000216639 KIAA1644Q3SXP7 199 aa13.25□□□□□ -0.29
VRK1-201ENST00000216639 C9orf47Q6ZRZ4 202 aa13.25□□□□□ -0.29
VRK1-201ENST00000216639 ZNF738Q8NE65 137 aa13.25□□□□□ -0.29
VRK1-201ENST00000216639 ZFHX3Q15911 3703 aa13.25□□□□□ -0.29
VRK1-201ENST00000216639 A0A1B0GUT8 65 aa13.25□□□□□ -0.29
VRK1-201ENST00000216639 A0A1B0GW15 77 aa13.25□□□□□ -0.29
VRK1-201ENST00000216639 FABP5P3A8MUU1 101 aa13.25□□□□□ -0.29
VRK1-201ENST00000216639 SRIP30626 198 aa13.25□□□□□ -0.29
VRK1-201ENST00000216639 SRSF2Q01130 221 aaKnown RBP13.25□□□□□ -0.29
VRK1-201ENST00000216639 SLAQ13239 276 aa13.25□□□□□ -0.29
VRK1-201ENST00000216639 GDF5OSQ5U4N7 250 aa13.25□□□□□ -0.29
VRK1-201ENST00000216639 AGPAT4-IT1Q9H0P7 198 aa13.25□□□□□ -0.29
VRK1-201ENST00000216639 YAE1D1Q9NRH1 226 aa13.25□□□□□ -0.29
VRK1-201ENST00000216639 OVOL1O14753 267 aa13.24□□□□□ -0.29
VRK1-201ENST00000216639 SCGB2A2Q13296 93 aa13.24□□□□□ -0.29
VRK1-201ENST00000216639 TMEM256Q8N2U0 113 aa13.24□□□□□ -0.29
VRK1-201ENST00000216639 PPP1R14DQ9NXH3 145 aa13.24□□□□□ -0.29
VRK1-201ENST00000216639 ABCA12Q86UK0 2595 aa13.23□□□□□ -0.29
VRK1-201ENST00000216639 SOCS3O14543 225 aa13.23□□□□□ -0.29
VRK1-201ENST00000216639 REC114Q7Z4M0 266 aa13.23□□□□□ -0.29
VRK1-201ENST00000216639 APCP25054 2843 aa13.22□□□□□ -0.29
VRK1-201ENST00000216639 ESDP10768 282 aa13.22□□□□□ -0.29
VRK1-201ENST00000216639 ZNF80P51504 273 aaPredicted RBP13.22□□□□□ -0.29
VRK1-201ENST00000216639 OR10J6PQ8NGY7 276 aa13.22□□□□□ -0.29
VRK1-201ENST00000216639 SSBP4Q9BWG4 385 aaPredicted RBP13.22□□□□□ -0.29
VRK1-201ENST00000216639 NIT2Q9NQR4 276 aa13.22□□□□□ -0.29
VRK1-201ENST00000216639 LENEPQ9Y5L5 61 aa13.22□□□□□ -0.29
VRK1-201ENST00000216639 LGALS9O00182 355 aa13.22□□□□□ -0.29
VRK1-201ENST00000216639 PAFAH1B2P68402 229 aa13.22□□□□□ -0.29
VRK1-201ENST00000216639 KLHDC1Q8N7A1 406 aa13.22□□□□□ -0.29
VRK1-201ENST00000216639 C20orf173Q96LM9 149 aa13.22□□□□□ -0.29
VRK1-201ENST00000216639 LINC00477Q96M19 166 aa13.22□□□□□ -0.29
VRK1-201ENST00000216639 TPPP3Q9BW30 176 aa13.22□□□□□ -0.29
VRK1-201ENST00000216639 TMSB15BA0A087X1C1 80 aa13.21□□□□□ -0.3
VRK1-201ENST00000216639 A0A1B0GUS0 222 aa13.21□□□□□ -0.3
VRK1-201ENST00000216639 DNAJC9-AS1A6NH13 148 aa13.21□□□□□ -0.3
VRK1-201ENST00000216639 SERF1AO75920 110 aa13.21□□□□□ -0.3
VRK1-201ENST00000216639 ID1P41134 155 aa13.21□□□□□ -0.3
VRK1-201ENST00000216639 HIST1H1AQ02539 215 aaPredicted RBP13.21□□□□□ -0.3
VRK1-201ENST00000216639 KRTAP1-1Q07627 177 aa13.21□□□□□ -0.3
VRK1-201ENST00000216639 PYY3Q5JQD4 70 aa13.21□□□□□ -0.3
VRK1-201ENST00000216639 TP53TG3Q9ULZ0 132 aa13.21□□□□□ -0.3
VRK1-201ENST00000216639 CENPEQ02224 2701 aa13.2□□□□□ -0.3
VRK1-201ENST00000216639 IGHV4OR15-8A0A075B7B6 117 aa13.2□□□□□ -0.3
VRK1-201ENST00000216639 A0A087WW49 117 aa13.2□□□□□ -0.3
VRK1-201ENST00000216639 ORM1P02763 201 aa13.2□□□□□ -0.3
VRK1-201ENST00000216639 TENM4Q6N022 2769 aa13.2□□□□□ -0.3
VRK1-201ENST00000216639 TMEM213A2RRL7 107 aa13.19□□□□□ -0.3
VRK1-201ENST00000216639 FAM181BA6NEQ2 426 aa13.19□□□□□ -0.3
VRK1-201ENST00000216639 ARMS2P0C7Q2 107 aa13.19□□□□□ -0.3
VRK1-201ENST00000216639 CREBBPQ92793 2442 aa13.19□□□□□ -0.3
VRK1-201ENST00000216639 MAP1AP78559 2803 aaPredicted RBP13.19□□□□□ -0.3
VRK1-201ENST00000216639 IGKV3-7A0A075B6H7 116 aa13.19□□□□□ -0.3
VRK1-201ENST00000216639 NUPR1O60356 82 aa13.19□□□□□ -0.3
VRK1-201ENST00000216639 HOXD3P31249 432 aaPredicted RBP13.19□□□□□ -0.3
VRK1-201ENST00000216639 SYNJ2BPP57105 145 aa13.19□□□□□ -0.3
VRK1-201ENST00000216639 KLF5Q13887 457 aaPredicted RBP13.19□□□□□ -0.3
VRK1-201ENST00000216639 LINC01559Q495D7 138 aa13.19□□□□□ -0.3
VRK1-201ENST00000216639 DNLZQ5SXM8 178 aa13.19□□□□□ -0.3
VRK1-201ENST00000216639 LYZL1Q6UWQ5 148 aa13.19□□□□□ -0.3
VRK1-201ENST00000216639 ALKBH7Q9BT30 221 aaPredicted RBP13.19□□□□□ -0.3
VRK1-201ENST00000216639 PCP4L1A6NKN8 68 aa13.18□□□□□ -0.3
VRK1-201ENST00000216639 M0QZ24 198 aa13.18□□□□□ -0.3
VRK1-201ENST00000216639 FER1L6-AS1Q8NA97 138 aa13.18□□□□□ -0.3
VRK1-201ENST00000216639 GATD1Q8NB37 220 aa13.18□□□□□ -0.3
VRK1-201ENST00000216639 SAMD10Q9BYL1 202 aa13.18□□□□□ -0.3
VRK1-201ENST00000216639 JOSD1Q15040 202 aaPredicted RBP13.17□□□□□ -0.3
VRK1-201ENST00000216639 Q6ZSV7 163 aa13.17□□□□□ -0.3
VRK1-201ENST00000216639 C18orf32Q8TCD1 76 aa13.17□□□□□ -0.3
VRK1-201ENST00000216639 KCNS1Q96KK3 526 aa13.17□□□□□ -0.3
VRK1-201ENST00000216639 LOC102724200A0A096LPH7 203 aaPredicted RBP13.16□□□□□ -0.3
VRK1-201ENST00000216639 F2Z2F3 143 aa13.16□□□□□ -0.3
VRK1-201ENST00000216639 CTRLP40313 264 aa13.16□□□□□ -0.3
VRK1-201ENST00000216639 LINC00310P59036 64 aa13.16□□□□□ -0.3
VRK1-201ENST00000216639 C4orf3Q8WVX3 66 aa13.16□□□□□ -0.3
VRK1-201ENST00000216639 EDN2P20800 178 aa13.16□□□□□ -0.3
VRK1-201ENST00000216639 OR8A1Q8NGG7 326 aa13.16□□□□□ -0.3
VRK1-201ENST00000216639 TRBV7-9A0A0J9YWB2 115 aa13.15□□□□□ -0.3
VRK1-201ENST00000216639 IGLC6P0CF74 106 aa13.15□□□□□ -0.3
VRK1-201ENST00000216639 ZNF705DP0CH99 300 aaPredicted RBP13.15□□□□□ -0.3
VRK1-201ENST00000216639 ZNF705BP0CI00 300 aaPredicted RBP13.15□□□□□ -0.3
VRK1-201ENST00000216639 SRD5A1P18405 259 aa13.15□□□□□ -0.3
VRK1-201ENST00000216639 S100A12P80511 92 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms