RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 DMRT1Q9Y5R6 373 aa10.89□□□□□ -0.67
SIX4-201ENST00000216513 SPG11Q96JI7 2443 aa10.89□□□□□ -0.67
SIX4-201ENST00000216513 SPCS1Q9Y6A9 102 aa10.89□□□□□ -0.67
SIX4-201ENST00000216513 MED13Q9UHV7 2174 aa10.89□□□□□ -0.67
SIX4-201ENST00000216513 MYCNOSP40205 109 aa10.88□□□□□ -0.67
SIX4-201ENST00000216513 CARHSP1Q9Y2V2 147 aaKnown RBP10.88□□□□□ -0.67
SIX4-201ENST00000216513 DLX4Q92988 240 aaPredicted RBP10.88□□□□□ -0.67
SIX4-201ENST00000216513 IGKV1-6A0A0C4DH72 117 aa10.88□□□□□ -0.67
SIX4-201ENST00000216513 MALRD1Q5VYJ5 2156 aa10.88□□□□□ -0.67
SIX4-201ENST00000216513 IGHV4OR15-8A0A075B7B6 117 aa10.88□□□□□ -0.67
SIX4-201ENST00000216513 A0A087WW49 117 aa10.88□□□□□ -0.67
SIX4-201ENST00000216513 RBMY1BA6NDE4 496 aaKnown RBP10.88□□□□□ -0.67
SIX4-201ENST00000216513 RBMY1EA6NEQ0 496 aaKnown RBP10.88□□□□□ -0.67
SIX4-201ENST00000216513 RBMY1DP0C7P1 496 aaKnown RBP10.88□□□□□ -0.67
SIX4-201ENST00000216513 RBMY1A1P0DJD3 496 aaKnown RBP10.88□□□□□ -0.67
SIX4-201ENST00000216513 RBMY1CP0DJD4 496 aa10.88□□□□□ -0.67
SIX4-201ENST00000216513 TRAV26-2A0A0B4J265 109 aa10.88□□□□□ -0.67
SIX4-201ENST00000216513 C15orf65H3BRN8 121 aa10.88□□□□□ -0.67
SIX4-201ENST00000216513 HEATR5AQ86XA9 2040 aa10.88□□□□□ -0.67
SIX4-201ENST00000216513 PAX4O43316 350 aa10.87□□□□□ -0.67
SIX4-201ENST00000216513 PAX2Q02962 417 aa10.87□□□□□ -0.67
SIX4-201ENST00000216513 NEGR1Q7Z3B1 354 aa10.87□□□□□ -0.67
SIX4-201ENST00000216513 A0A1W2PRE2 83 aa10.87□□□□□ -0.67
SIX4-201ENST00000216513 F8W735 103 aaPredicted RBP10.87□□□□□ -0.67
SIX4-201ENST00000216513 DEFB4AO15263 64 aa10.87□□□□□ -0.67
SIX4-201ENST00000216513 NMSQ5H8A3 153 aa10.87□□□□□ -0.67
SIX4-201ENST00000216513 H3BUA1 57 aa10.87□□□□□ -0.67
SIX4-201ENST00000216513 VWC2Q2TAL6 325 aa10.87□□□□□ -0.67
SIX4-201ENST00000216513 ZNF625Q96I27 306 aaPredicted RBP10.87□□□□□ -0.67
SIX4-201ENST00000216513 SHANK2-AS3Q9BTD1 123 aa10.87□□□□□ -0.67
SIX4-201ENST00000216513 SH2D1AO60880 128 aa10.87□□□□□ -0.67
SIX4-201ENST00000216513 QRFPP83859 136 aa10.87□□□□□ -0.67
SIX4-201ENST00000216513 C11orf53Q8IXP5 236 aa10.87□□□□□ -0.67
SIX4-201ENST00000216513 AGMATQ9BSE5 352 aa10.87□□□□□ -0.67
SIX4-201ENST00000216513 NOP10Q9NPE3 64 aaKnown RBP10.87□□□□□ -0.67
SIX4-201ENST00000216513 NDUFA4L2Q9NRX3 87 aa10.87□□□□□ -0.67
SIX4-201ENST00000216513 TMEM131Q92545 1883 aa10.87□□□□□ -0.67
SIX4-201ENST00000216513 LHBP01229 141 aa10.86□□□□□ -0.67
SIX4-201ENST00000216513 LINC00158P58513 81 aa10.86□□□□□ -0.67
SIX4-201ENST00000216513 RMI2Q96E14 147 aa10.86□□□□□ -0.67
SIX4-201ENST00000216513 NCOR1P1Q9H4R4 102 aa10.86□□□□□ -0.67
SIX4-201ENST00000216513 ESM1Q9NQ30 184 aa10.86□□□□□ -0.67
SIX4-201ENST00000216513 IGHV3-38A0A0C4DH36 116 aa10.86□□□□□ -0.67
SIX4-201ENST00000216513 F2Z2F3 143 aa10.86□□□□□ -0.67
SIX4-201ENST00000216513 TRAV8-2A0A0B4J237 113 aa10.86□□□□□ -0.67
SIX4-201ENST00000216513 TRAV13-1A0A0B4J241 112 aa10.86□□□□□ -0.67
SIX4-201ENST00000216513 SS18Q15532 418 aa10.86□□□□□ -0.67
SIX4-201ENST00000216513 FAM90A2PQ658T7 463 aa10.86□□□□□ -0.67
SIX4-201ENST00000216513 ZNF561-AS1K7EIQ3 104 aa10.86□□□□□ -0.67
SIX4-201ENST00000216513 HBDP02042 147 aa10.86□□□□□ -0.67
SIX4-201ENST00000216513 CHTOPQ9Y3Y2 248 aaKnown RBP10.86□□□□□ -0.67
SIX4-201ENST00000216513 DEFB135Q30KP9 77 aa10.85□□□□□ -0.67
SIX4-201ENST00000216513 CDKN1BP46527 198 aa10.85□□□□□ -0.67
SIX4-201ENST00000216513 IGLL5B9A064 214 aa10.85□□□□□ -0.67
SIX4-201ENST00000216513 CCL18P55774 89 aa10.85□□□□□ -0.67
SIX4-201ENST00000216513 SRSF1Q07955 248 aaKnown RBP eCLIP10.85□□□□□ -0.67
SIX4-201ENST00000216513 HIST2H2BDQ6DRA6 164 aa10.85□□□□□ -0.67
SIX4-201ENST00000216513 CYSLTR1Q9Y271 337 aa10.85□□□□□ -0.67
SIX4-201ENST00000216513 IGKV1OR2-108A0A075B7D4 117 aa10.85□□□□□ -0.67
SIX4-201ENST00000216513 MEGF9Q9H1U4 602 aa10.85□□□□□ -0.67
SIX4-201ENST00000216513 TMEM14BQ9NUH8 114 aa10.85□□□□□ -0.67
SIX4-201ENST00000216513 SPAG8Q99932 426 aaPredicted RBP10.85□□□□□ -0.67
SIX4-201ENST00000216513 TNRC6AQ8NDV7 1962 aaKnown RBP10.85□□□□□ -0.67
SIX4-201ENST00000216513 YPEL3P61236 119 aaPredicted RBP10.84□□□□□ -0.67
SIX4-201ENST00000216513 AMN1Q8IY45 258 aa10.84□□□□□ -0.67
SIX4-201ENST00000216513 IGKV2D-24A0A075B6R9 120 aa10.84□□□□□ -0.67
SIX4-201ENST00000216513 C15orf62A8K5M9 175 aa10.84□□□□□ -0.67
SIX4-201ENST00000216513 C9JQL5 133 aa10.84□□□□□ -0.67
SIX4-201ENST00000216513 SLC25A20O43772 301 aa10.84□□□□□ -0.67
SIX4-201ENST00000216513 PCP4P48539 62 aa10.84□□□□□ -0.67
SIX4-201ENST00000216513 IGF2RP11717 2491 aa10.84□□□□□ -0.67
SIX4-201ENST00000216513 RNASE13Q5GAN3 156 aaKnown RBP10.84□□□□□ -0.67
SIX4-201ENST00000216513 A0A087X0K7 114 aa10.84□□□□□ -0.67
SIX4-201ENST00000216513 TMEM213A2RRL7 107 aa10.83□□□□□ -0.68
SIX4-201ENST00000216513 LHFPL1Q86WI0 220 aa10.83□□□□□ -0.68
SIX4-201ENST00000216513 AJUBAQ96IF1 538 aa10.83□□□□□ -0.68
SIX4-201ENST00000216513 A0A1B0GW15 77 aa10.83□□□□□ -0.68
SIX4-201ENST00000216513 IGLL1P15814 213 aa10.83□□□□□ -0.68
SIX4-201ENST00000216513 C5orf56Q8N8D9 126 aa10.83□□□□□ -0.68
SIX4-201ENST00000216513 S100A7L2Q5SY68 101 aa10.83□□□□□ -0.68
SIX4-201ENST00000216513 CLPSL2Q6UWE3 100 aa10.83□□□□□ -0.68
SIX4-201ENST00000216513 DYSFO75923 2080 aa10.83□□□□□ -0.68
SIX4-201ENST00000216513 IGHV1OR15-1A0A075B7D0 117 aa10.83□□□□□ -0.68
SIX4-201ENST00000216513 KRTAP10-9P60411 292 aa10.83□□□□□ -0.68
SIX4-201ENST00000216513 MTURNQ8N3F0 131 aa10.83□□□□□ -0.68
SIX4-201ENST00000216513 NUP35Q8NFH5 326 aa10.83□□□□□ -0.68
SIX4-201ENST00000216513 MS4A6AQ9H2W1 248 aa10.83□□□□□ -0.68
SIX4-201ENST00000216513 CEP192Q8TEP8 1941 aa10.83□□□□□ -0.68
SIX4-201ENST00000216513 DPM2O94777 84 aa10.83□□□□□ -0.68
SIX4-201ENST00000216513 NDUFA11Q86Y39 141 aa10.82□□□□□ -0.68
SIX4-201ENST00000216513 IL17DQ8TAD2 202 aa10.82□□□□□ -0.68
SIX4-201ENST00000216513 SMPXQ9UHP9 88 aa10.82□□□□□ -0.68
SIX4-201ENST00000216513 C6orf226Q5I0X4 101 aa10.82□□□□□ -0.68
SIX4-201ENST00000216513 TMEM86BQ8N661 226 aa10.82□□□□□ -0.68
SIX4-201ENST00000216513 TMEM170AQ8WVE7 144 aa10.82□□□□□ -0.68
SIX4-201ENST00000216513 SPART-AS1P0CW21 52 aa10.82□□□□□ -0.68
SIX4-201ENST00000216513 WIPF2Q8TF74 440 aaPredicted RBP10.82□□□□□ -0.68
SIX4-201ENST00000216513 F6UB75 175 aa10.82□□□□□ -0.68
SIX4-201ENST00000216513 WT1-ASQ06250 92 aa10.82□□□□□ -0.68
SIX4-201ENST00000216513 GATD1Q8NB37 220 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms