RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 MGPP08493 103 aa8.87□□□□□ -0.99
ACTN1-201ENST00000193403 TMEM30BQ3MIR4 351 aa8.87□□□□□ -0.99
ACTN1-201ENST00000193403 KHDC1LQ5JSQ8 128 aa8.87□□□□□ -0.99
ACTN1-201ENST00000193403 C2orf91Q6ZV80 131 aa8.87□□□□□ -0.99
ACTN1-201ENST00000193403 SEM1Q6ZVN7 128 aa8.87□□□□□ -0.99
ACTN1-201ENST00000193403 PRSS22Q9GZN4 317 aa8.87□□□□□ -0.99
ACTN1-201ENST00000193403 CTSZQ9UBR2 303 aa8.87□□□□□ -0.99
ACTN1-201ENST00000193403 IGHV1-3A0A0C4DH29 117 aa8.86□□□□□ -0.99
ACTN1-201ENST00000193403 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.86□□□□□ -0.99
ACTN1-201ENST00000193403 FAM104BQ5XKR9 115 aa8.86□□□□□ -0.99
ACTN1-201ENST00000193403 ADAMTSL5Q6ZMM2 481 aa8.86□□□□□ -0.99
ACTN1-201ENST00000193403 IGLV3-9A0A075B6K5 115 aa8.86□□□□□ -0.99
ACTN1-201ENST00000193403 A0A1W2PPM0 123 aa8.86□□□□□ -0.99
ACTN1-201ENST00000193403 IGKV3-20P01619 116 aa8.86□□□□□ -0.99
ACTN1-201ENST00000193403 OR9G4Q8NGQ1 327 aa8.86□□□□□ -0.99
ACTN1-201ENST00000193403 KLF12Q9Y4X4 402 aa8.86□□□□□ -0.99
ACTN1-201ENST00000193403 PCSK5Q92824 1860 aa8.86□□□□□ -0.99
ACTN1-201ENST00000193403 FXYD2P54710 66 aa8.86□□□□□ -0.99
ACTN1-201ENST00000193403 LY6DQ14210 128 aa8.86□□□□□ -0.99
ACTN1-201ENST00000193403 ETDBQ3ZM63 59 aa8.86□□□□□ -0.99
ACTN1-201ENST00000193403 ZNF502Q8TBZ5 544 aa8.86□□□□□ -0.99
ACTN1-201ENST00000193403 CHAC1Q9BUX1 264 aa8.86□□□□□ -0.99
ACTN1-201ENST00000193403 C7orf69Q9H7B7 122 aa8.86□□□□□ -0.99
ACTN1-201ENST00000193403 LOXP28300 417 aaPredicted RBP8.85□□□□□ -0.99
ACTN1-201ENST00000193403 GATA4P43694 442 aa8.85□□□□□ -0.99
ACTN1-201ENST00000193403 ERCC8Q13216 396 aa8.85□□□□□ -0.99
ACTN1-201ENST00000193403 SRSF9Q13242 221 aaKnown RBP eCLIP8.85□□□□□ -0.99
ACTN1-201ENST00000193403 TMEM158Q8WZ71 300 aa8.85□□□□□ -0.99
ACTN1-201ENST00000193403 A0A1B0GWB2 263 aa8.85□□□□□ -0.99
ACTN1-201ENST00000193403 H3BVH4 76 aa8.85□□□□□ -0.99
ACTN1-201ENST00000193403 IGLV2-23P01705 113 aa8.85□□□□□ -0.99
ACTN1-201ENST00000193403 BMI1P35226 326 aa8.85□□□□□ -0.99
ACTN1-201ENST00000193403 ZNF479Q96JC4 524 aa8.85□□□□□ -0.99
ACTN1-201ENST00000193403 FAM215AQ9Y5M1 114 aa8.85□□□□□ -0.99
ACTN1-201ENST00000193403 TSSC4Q9Y5U2 329 aaPredicted RBP8.85□□□□□ -0.99
ACTN1-201ENST00000193403 SPRY2O43597 315 aa8.85□□□□□ -0.99
ACTN1-201ENST00000193403 NDUFS7O75251 213 aa8.85□□□□□ -0.99
ACTN1-201ENST00000193403 MFAP4P55083 255 aa8.85□□□□□ -0.99
ACTN1-201ENST00000193403 LY6EQ16553 131 aa8.85□□□□□ -0.99
ACTN1-201ENST00000193403 Q6AWC8 147 aa8.85□□□□□ -0.99
ACTN1-201ENST00000193403 OR5A1Q8NGJ0 315 aa8.85□□□□□ -0.99
ACTN1-201ENST00000193403 RNASE6Q93091 150 aaKnown RBP8.85□□□□□ -0.99
ACTN1-201ENST00000193403 POLQO75417 2590 aa8.85□□□□□ -0.99
ACTN1-201ENST00000193403 TRAV40A0A0B4J280 105 aa8.84□□□□□ -0.99
ACTN1-201ENST00000193403 CRXO43186 299 aaPredicted RBP8.84□□□□□ -0.99
ACTN1-201ENST00000193403 IGKV1-17P01599 117 aa8.84□□□□□ -0.99
ACTN1-201ENST00000193403 ZNF418Q8TF45 676 aaPredicted RBP8.84□□□□□ -0.99
ACTN1-201ENST00000193403 GLMPQ8WWB7 406 aa8.84□□□□□ -0.99
ACTN1-201ENST00000193403 SHANK2-AS3Q9BTD1 123 aa8.84□□□□□ -0.99
ACTN1-201ENST00000193403 TRAV26-2A0A0B4J265 109 aa8.84□□□□□ -0.99
ACTN1-201ENST00000193403 MBD3L4A6NDZ8 208 aaPredicted RBP8.84□□□□□ -0.99
ACTN1-201ENST00000193403 MBD3L3A6NE82 208 aaPredicted RBP8.84□□□□□ -0.99
ACTN1-201ENST00000193403 MBD3L5A6NJ08 208 aaPredicted RBP8.84□□□□□ -0.99
ACTN1-201ENST00000193403 IGKCP01834 107 aa8.84□□□□□ -0.99
ACTN1-201ENST00000193403 MBD3L2Q8NHZ7 208 aaPredicted RBP8.84□□□□□ -0.99
ACTN1-201ENST00000193403 RPL7P18124 248 aaKnown RBP8.84□□□□□ -1
ACTN1-201ENST00000193403 MYCNOSP40205 109 aa8.84□□□□□ -1
ACTN1-201ENST00000193403 SH2D6Q7Z4S9 175 aa8.84□□□□□ -1
ACTN1-201ENST00000193403 PIP4P1Q86T03 277 aa8.84□□□□□ -1
ACTN1-201ENST00000193403 A0A0G2JNJ9 132 aa8.83□□□□□ -1
ACTN1-201ENST00000193403 H3BMG7 143 aa8.83□□□□□ -1
ACTN1-201ENST00000193403 CLEC2AQ6UVW9 174 aa8.83□□□□□ -1
ACTN1-201ENST00000193403 VGLL1Q99990 258 aa8.83□□□□□ -1
ACTN1-201ENST00000193403 C21orf62Q9NYP8 219 aa8.83□□□□□ -1
ACTN1-201ENST00000193403 Q9UFV3 132 aa8.83□□□□□ -1
ACTN1-201ENST00000193403 A0A1B0GW15 77 aa8.83□□□□□ -1
ACTN1-201ENST00000193403 M0R381 172 aa8.83□□□□□ -1
ACTN1-201ENST00000193403 CEACAM3P40198 252 aa8.83□□□□□ -1
ACTN1-201ENST00000193403 TTC9CQ8N5M4 171 aa8.83□□□□□ -1
ACTN1-201ENST00000193403 RNF182Q8N6D2 247 aa8.83□□□□□ -1
ACTN1-201ENST00000193403 ARPC1AQ92747 370 aa8.83□□□□□ -1
ACTN1-201ENST00000193403 RAB1BQ9H0U4 201 aa8.83□□□□□ -1
ACTN1-201ENST00000193403 EGR2P11161 476 aaPredicted RBP8.83□□□□□ -1
ACTN1-201ENST00000193403 LGALS9BQ3B8N2 356 aa8.83□□□□□ -1
ACTN1-201ENST00000193403 LGALS9CQ6DKI2 356 aa8.83□□□□□ -1
ACTN1-201ENST00000193403 SIGMAR1Q99720 223 aa8.83□□□□□ -1
ACTN1-201ENST00000193403 TMEM8BA6NDV4 472 aa8.82□□□□□ -1
ACTN1-201ENST00000193403 H7C2G1 150 aa8.82□□□□□ -1
ACTN1-201ENST00000193403 APOMO95445 188 aa8.82□□□□□ -1
ACTN1-201ENST00000193403 SCGB1C2P0DMR2 95 aa8.82□□□□□ -1
ACTN1-201ENST00000193403 AZU1P20160 251 aa8.82□□□□□ -1
ACTN1-201ENST00000193403 NBL1P41271 181 aa8.82□□□□□ -1
ACTN1-201ENST00000193403 SIGLEC15Q6ZMC9 328 aa8.82□□□□□ -1
ACTN1-201ENST00000193403 CYSLTR1Q9Y271 337 aa8.82□□□□□ -1
ACTN1-201ENST00000193403 PTPRBP23467 1997 aa8.82□□□□□ -1
ACTN1-201ENST00000193403 SMG1Q96Q15 3661 aaKnown RBP8.82□□□□□ -1
ACTN1-201ENST00000193403 NPIPB6E9PJ23 425 aa8.82□□□□□ -1
ACTN1-201ENST00000193403 DPM2O94777 84 aa8.82□□□□□ -1
ACTN1-201ENST00000193403 NPFFR1Q9GZQ6 430 aa8.82□□□□□ -1
ACTN1-201ENST00000193403 IGHV3-11P01762 117 aa8.82□□□□□ -1
ACTN1-201ENST00000193403 SRD5A1P18405 259 aa8.82□□□□□ -1
ACTN1-201ENST00000193403 TMEM155Q4W5P6 130 aa8.82□□□□□ -1
ACTN1-201ENST00000193403 SPOCK3Q9BQ16 436 aa8.82□□□□□ -1
ACTN1-201ENST00000193403 OR11H12B2RN74 326 aa8.81□□□□□ -1
ACTN1-201ENST00000193403 TNFRSF6BO95407 300 aa8.81□□□□□ -1
ACTN1-201ENST00000193403 CRIP1P50238 77 aa8.81□□□□□ -1
ACTN1-201ENST00000193403 EFNA4P52798 201 aa8.81□□□□□ -1
ACTN1-201ENST00000193403 TEX36Q5VZQ5 186 aa8.81□□□□□ -1
ACTN1-201ENST00000193403 ZNF491Q8N8L2 437 aa8.81□□□□□ -1
ACTN1-201ENST00000193403 OR11H1Q8NG94 326 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms