RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 NDUFA4L2Q9NRX3 87 aa11.69□□□□□ -0.54
TMEM38A-201ENST00000187762 TMEM8BA6NDV4 472 aa11.68□□□□□ -0.54
TMEM38A-201ENST00000187762 LINC01548A6NM66 108 aa11.68□□□□□ -0.54
TMEM38A-201ENST00000187762 HOXB4P17483 251 aaPredicted RBP11.68□□□□□ -0.54
TMEM38A-201ENST00000187762 SRD5A1P18405 259 aa11.68□□□□□ -0.54
TMEM38A-201ENST00000187762 KIR2DL4Q99706 377 aa11.68□□□□□ -0.54
TMEM38A-201ENST00000187762 OTORQ9NRC9 128 aa11.68□□□□□ -0.54
TMEM38A-201ENST00000187762 ZNF688P0C7X2 276 aa11.68□□□□□ -0.54
TMEM38A-201ENST00000187762 CKS2P33552 79 aa11.68□□□□□ -0.54
TMEM38A-201ENST00000187762 PSMB2P49721 201 aa11.68□□□□□ -0.54
TMEM38A-201ENST00000187762 CCL8P80075 99 aa11.68□□□□□ -0.54
TMEM38A-201ENST00000187762 LYZL1Q6UWQ5 148 aa11.68□□□□□ -0.54
TMEM38A-201ENST00000187762 FABP5P3A8MUU1 101 aa11.67□□□□□ -0.54
TMEM38A-201ENST00000187762 RHODO00212 210 aa11.67□□□□□ -0.54
TMEM38A-201ENST00000187762 HOXA3O43365 443 aaPredicted RBP11.67□□□□□ -0.54
TMEM38A-201ENST00000187762 IL4P05112 153 aa11.67□□□□□ -0.54
TMEM38A-201ENST00000187762 LEPP41159 167 aa11.67□□□□□ -0.54
TMEM38A-201ENST00000187762 NDUFV3P56181 108 aaKnown RBP11.67□□□□□ -0.54
TMEM38A-201ENST00000187762 TWIST1Q15672 202 aa11.67□□□□□ -0.54
TMEM38A-201ENST00000187762 EXOC3-AS1Q8N2X6 119 aa11.67□□□□□ -0.54
TMEM38A-201ENST00000187762 CUL9Q8IWT3 2517 aa11.67□□□□□ -0.54
TMEM38A-201ENST00000187762 TRBV6-1A0A0K0K1D8 114 aa11.67□□□□□ -0.54
TMEM38A-201ENST00000187762 E7EUB6 86 aa11.67□□□□□ -0.54
TMEM38A-201ENST00000187762 ARL3P36405 182 aa11.67□□□□□ -0.54
TMEM38A-201ENST00000187762 TMEM160Q9NX00 188 aa11.67□□□□□ -0.54
TMEM38A-201ENST00000187762 PCNX1Q96RV3 2341 aa11.66□□□□□ -0.54
TMEM38A-201ENST00000187762 CD40P25942 277 aa11.66□□□□□ -0.54
TMEM38A-201ENST00000187762 CRIP1P50238 77 aa11.66□□□□□ -0.54
TMEM38A-201ENST00000187762 RPUSD1Q9UJJ7 312 aaKnown RBP11.66□□□□□ -0.54
TMEM38A-201ENST00000187762 ADGRG4Q8IZF6 3080 aa11.66□□□□□ -0.54
TMEM38A-201ENST00000187762 TRAV40A0A0B4J280 105 aa11.66□□□□□ -0.54
TMEM38A-201ENST00000187762 ZGRF1Q86YA3 2104 aa11.65□□□□□ -0.54
TMEM38A-201ENST00000187762 KALRNO60229 2985 aa11.65□□□□□ -0.54
TMEM38A-201ENST00000187762 DMXL2Q8TDJ6 3036 aa11.65□□□□□ -0.54
TMEM38A-201ENST00000187762 CCL3L1P16619 93 aa11.65□□□□□ -0.54
TMEM38A-201ENST00000187762 RAB9BQ9NP90 201 aa11.65□□□□□ -0.54
TMEM38A-201ENST00000187762 TRBV20-1A0A075B6N2 111 aa11.65□□□□□ -0.54
TMEM38A-201ENST00000187762 A0A087WX48 190 aa11.65□□□□□ -0.54
TMEM38A-201ENST00000187762 TMEM262E9PQX1 116 aa11.65□□□□□ -0.54
TMEM38A-201ENST00000187762 ATP5LO75964 103 aa11.65□□□□□ -0.54
TMEM38A-201ENST00000187762 WT1-ASQ06250 92 aa11.65□□□□□ -0.54
TMEM38A-201ENST00000187762 MRPL20Q9BYC9 149 aaKnown RBP11.65□□□□□ -0.54
TMEM38A-201ENST00000187762 SSUH2Q9Y2M2 353 aa11.65□□□□□ -0.54
TMEM38A-201ENST00000187762 NAV3Q8IVL0 2385 aa11.65□□□□□ -0.55
TMEM38A-201ENST00000187762 FCN3O75636 299 aa11.64□□□□□ -0.55
TMEM38A-201ENST00000187762 RUSC1-AS1Q66K80 236 aa11.64□□□□□ -0.55
TMEM38A-201ENST00000187762 IGFL3Q6UXB1 125 aa11.64□□□□□ -0.55
TMEM38A-201ENST00000187762 PKDREJQ9NTG1 2253 aa11.64□□□□□ -0.55
TMEM38A-201ENST00000187762 AJUBAQ96IF1 538 aa11.64□□□□□ -0.55
TMEM38A-201ENST00000187762 TMSB15BA0A087X1C1 80 aa11.63□□□□□ -0.55
TMEM38A-201ENST00000187762 LOC107984156A0A0G2JMH3 177 aa11.63□□□□□ -0.55
TMEM38A-201ENST00000187762 LINC01546A6NGU7 62 aa11.63□□□□□ -0.55
TMEM38A-201ENST00000187762 INS-IGF2F8WCM5 200 aa11.63□□□□□ -0.55
TMEM38A-201ENST00000187762 LINC01619G3V211 115 aa11.63□□□□□ -0.55
TMEM38A-201ENST00000187762 PRB4P10163 310 aaPredicted RBP11.63□□□□□ -0.55
TMEM38A-201ENST00000187762 PRTN3P24158 256 aa11.63□□□□□ -0.55
TMEM38A-201ENST00000187762 GAGE2BQ13066 116 aa11.63□□□□□ -0.55
TMEM38A-201ENST00000187762 C3orf36Q3SXR2 165 aa11.63□□□□□ -0.55
TMEM38A-201ENST00000187762 GAGE2EQ4V326 116 aa11.63□□□□□ -0.55
TMEM38A-201ENST00000187762 SFTA2Q6UW10 78 aa11.63□□□□□ -0.55
TMEM38A-201ENST00000187762 ZFP2Q6ZN57 461 aa11.63□□□□□ -0.55
TMEM38A-201ENST00000187762 ARL17AQ8IVW1 177 aa11.63□□□□□ -0.55
TMEM38A-201ENST00000187762 MAP1LC3AQ9H492 121 aa11.63□□□□□ -0.55
TMEM38A-201ENST00000187762 MRPL35Q9NZE8 188 aaKnown RBP11.63□□□□□ -0.55
TMEM38A-201ENST00000187762 GAGE2DQ9UEU5 116 aa11.63□□□□□ -0.55
TMEM38A-201ENST00000187762 ZNF292O60281 2723 aa11.63□□□□□ -0.55
TMEM38A-201ENST00000187762 ZNF318Q5VUA4 2279 aa11.63□□□□□ -0.55
TMEM38A-201ENST00000187762 TM4SF5O14894 197 aa11.63□□□□□ -0.55
TMEM38A-201ENST00000187762 PLXNB1O43157 2135 aa11.63□□□□□ -0.55
TMEM38A-201ENST00000187762 TMEM75Q8N9X5 138 aa11.63□□□□□ -0.55
TMEM38A-201ENST00000187762 RPEQ96AT9 228 aa11.63□□□□□ -0.55
TMEM38A-201ENST00000187762 FBXL15Q9H469 300 aa11.63□□□□□ -0.55
TMEM38A-201ENST00000187762 LINC01549A6NIU2 74 aa11.62□□□□□ -0.55
TMEM38A-201ENST00000187762 TEX36Q5VZQ5 186 aa11.62□□□□□ -0.55
TMEM38A-201ENST00000187762 LINC00574Q9H8X3 128 aa11.62□□□□□ -0.55
TMEM38A-201ENST00000187762 ANKRD11Q6UB99 2663 aaPredicted RBP11.62□□□□□ -0.55
TMEM38A-201ENST00000187762 GVINP1Q7Z2Y8 2422 aa11.62□□□□□ -0.55
TMEM38A-201ENST00000187762 SUB1P53999 127 aaKnown RBP eCLIP11.62□□□□□ -0.55
TMEM38A-201ENST00000187762 LINC01559Q495D7 138 aa11.62□□□□□ -0.55
TMEM38A-201ENST00000187762 C10orf55Q5SWW7 151 aa11.62□□□□□ -0.55
TMEM38A-201ENST00000187762 CENPVL3A0A0U1RRI6 287 aa11.61□□□□□ -0.55
TMEM38A-201ENST00000187762 CGB1A6NKQ9 187 aa11.61□□□□□ -0.55
TMEM38A-201ENST00000187762 NCBP2LA6PVI3 153 aaKnown RBP11.61□□□□□ -0.55
TMEM38A-201ENST00000187762 ZNF833PQ6ZTB9 187 aa11.61□□□□□ -0.55
TMEM38A-201ENST00000187762 YAE1D1Q9NRH1 226 aa11.61□□□□□ -0.55
TMEM38A-201ENST00000187762 RIF1Q5UIP0 2472 aaKnown RBP11.61□□□□□ -0.55
TMEM38A-201ENST00000187762 ID1P41134 155 aa11.61□□□□□ -0.55
TMEM38A-201ENST00000187762 UBE2D3P61077 147 aa11.61□□□□□ -0.55
TMEM38A-201ENST00000187762 UBE2D2P62837 147 aa11.61□□□□□ -0.55
TMEM38A-201ENST00000187762 ANKRD29Q8N6D5 301 aa11.61□□□□□ -0.55
TMEM38A-201ENST00000187762 TRGV9Q99603 122 aa11.61□□□□□ -0.55
TMEM38A-201ENST00000187762 SLC25A39Q9BZJ4 359 aaPredicted RBP11.61□□□□□ -0.55
TMEM38A-201ENST00000187762 MYMXA0A1B0GTQ4 84 aa11.6□□□□□ -0.55
TMEM38A-201ENST00000187762 A8MWV9 139 aa11.6□□□□□ -0.55
TMEM38A-201ENST00000187762 IFITM1P13164 125 aa11.6□□□□□ -0.55
TMEM38A-201ENST00000187762 TTC32Q5I0X7 151 aa11.6□□□□□ -0.55
TMEM38A-201ENST00000187762 IGF2-ASQ6U949 168 aa11.6□□□□□ -0.55
TMEM38A-201ENST00000187762 SBSPONQ8IVN8 264 aa11.6□□□□□ -0.55
TMEM38A-201ENST00000187762 FAM57AQ8TBR7 257 aa11.6□□□□□ -0.55
TMEM38A-201ENST00000187762 PIEZO2Q9H5I5 2752 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms