RNA–Protein interactions for RNA: ENST00000006275.8

TRAPPC6A-201, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6A, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-201ENST00000006275 ARPC5O15511 151 aa13.5□□□□□ -0.25
TRAPPC6A-201ENST00000006275 TSPOP30536 169 aa13.5□□□□□ -0.25
TRAPPC6A-201ENST00000006275 RPL7L1Q6DKI1 246 aaKnown RBP13.5□□□□□ -0.25
TRAPPC6A-201ENST00000006275 OR2G3Q8NGZ4 309 aa13.5□□□□□ -0.25
TRAPPC6A-201ENST00000006275 PHYHIPLQ96FC7 376 aa13.5□□□□□ -0.25
TRAPPC6A-201ENST00000006275 LOC102723971A0A1B0GUV8 181 aa13.49□□□□□ -0.25
TRAPPC6A-201ENST00000006275 RANP62826 216 aaKnown RBP13.49□□□□□ -0.25
TRAPPC6A-201ENST00000006275 PQLC2Q6ZP29 291 aa13.49□□□□□ -0.25
TRAPPC6A-201ENST00000006275 LINC01587Q99440 93 aa13.49□□□□□ -0.25
TRAPPC6A-201ENST00000006275 DEFB131BA0A096LNP1 70 aa13.48□□□□□ -0.25
TRAPPC6A-201ENST00000006275 ZNF705GA8MUZ8 300 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC6A-201ENST00000006275 MBP02144 154 aa13.48□□□□□ -0.25
TRAPPC6A-201ENST00000006275 SPART-AS1P0CW21 52 aa13.48□□□□□ -0.25
TRAPPC6A-201ENST00000006275 CT45A10P0DMU9 189 aa13.48□□□□□ -0.25
TRAPPC6A-201ENST00000006275 LEPP41159 167 aa13.48□□□□□ -0.25
TRAPPC6A-201ENST00000006275 CDC34P49427 236 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC6A-201ENST00000006275 SERF2P84101 59 aa13.48□□□□□ -0.25
TRAPPC6A-201ENST00000006275 ERCC8Q13216 396 aa13.48□□□□□ -0.25
TRAPPC6A-201ENST00000006275 LGALS9BQ3B8N2 356 aa13.48□□□□□ -0.25
TRAPPC6A-201ENST00000006275 LYPD1Q8N2G4 141 aa13.48□□□□□ -0.25
TRAPPC6A-201ENST00000006275 TMEM256Q8N2U0 113 aa13.48□□□□□ -0.25
TRAPPC6A-201ENST00000006275 GNPNAT1Q96EK6 184 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC6A-201ENST00000006275 ODF3Q96PU9 254 aa13.48□□□□□ -0.25
TRAPPC6A-201ENST00000006275 SH3BGRL3Q9H299 93 aa13.48□□□□□ -0.25
TRAPPC6A-201ENST00000006275 Q9H3A6 140 aa13.48□□□□□ -0.25
TRAPPC6A-201ENST00000006275 J3KRW8 73 aa13.47□□□□□ -0.25
TRAPPC6A-201ENST00000006275 TAAR5O14804 337 aa13.47□□□□□ -0.25
TRAPPC6A-201ENST00000006275 HMGB3O15347 200 aaKnown RBP13.47□□□□□ -0.25
TRAPPC6A-201ENST00000006275 CSN1S1P47710 185 aa13.47□□□□□ -0.25
TRAPPC6A-201ENST00000006275 KIR3DS1Q14943 382 aa13.47□□□□□ -0.25
TRAPPC6A-201ENST00000006275 ZNF767PQ75MW2 155 aa13.47□□□□□ -0.25
TRAPPC6A-201ENST00000006275 LINC00477Q96M19 166 aa13.47□□□□□ -0.25
TRAPPC6A-201ENST00000006275 NDUFAF3Q9BU61 184 aa13.47□□□□□ -0.25
TRAPPC6A-201ENST00000006275 IGKV2-40A0A087WW87 121 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC6A-201ENST00000006275 TEX48A0A1B0GUV7 120 aa13.46□□□□□ -0.25
TRAPPC6A-201ENST00000006275 IGKV2D-40P01614 121 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC6A-201ENST00000006275 PRM2P04554 102 aa13.46□□□□□ -0.25
TRAPPC6A-201ENST00000006275 C12orf74Q32Q52 190 aa13.46□□□□□ -0.25
TRAPPC6A-201ENST00000006275 FAM222AQ5U5X8 452 aa13.46□□□□□ -0.25
TRAPPC6A-201ENST00000006275 C20orf144Q9BQM9 153 aa13.46□□□□□ -0.25
TRAPPC6A-201ENST00000006275 YTHDF2Q9Y5A9 579 aaKnown RBP13.46□□□□□ -0.25
TRAPPC6A-201ENST00000006275 HTN1P15515 57 aa13.45□□□□□ -0.26
TRAPPC6A-201ENST00000006275 TAS2R60P59551 318 aa13.45□□□□□ -0.26
TRAPPC6A-201ENST00000006275 GFI1BQ5VTD9 330 aa13.45□□□□□ -0.26
TRAPPC6A-201ENST00000006275 C9orf47Q6ZRZ4 202 aa13.45□□□□□ -0.26
TRAPPC6A-201ENST00000006275 AGPAT4-IT1Q9H0P7 198 aa13.45□□□□□ -0.26
TRAPPC6A-201ENST00000006275 DKK2Q9UBU2 259 aa13.45□□□□□ -0.26
TRAPPC6A-201ENST00000006275 IGLV2-18A0A075B6J9 118 aa13.44□□□□□ -0.26
TRAPPC6A-201ENST00000006275 H7BYZ3 331 aa13.44□□□□□ -0.26
TRAPPC6A-201ENST00000006275 STAG3L2P0CL84 134 aa13.44□□□□□ -0.26
TRAPPC6A-201ENST00000006275 STAG3L3P0CL85 134 aa13.44□□□□□ -0.26
TRAPPC6A-201ENST00000006275 ARL14EPLP0DKL9 152 aa13.44□□□□□ -0.26
TRAPPC6A-201ENST00000006275 SOHLH1Q5JUK2 328 aa13.44□□□□□ -0.26
TRAPPC6A-201ENST00000006275 TMEM78Q5T7P6 136 aa13.44□□□□□ -0.26
TRAPPC6A-201ENST00000006275 RAB24Q969Q5 203 aa13.44□□□□□ -0.26
TRAPPC6A-201ENST00000006275 VGLL1Q99990 258 aa13.44□□□□□ -0.26
TRAPPC6A-201ENST00000006275 PGPA6NDG6 321 aa13.43□□□□□ -0.26
TRAPPC6A-201ENST00000006275 AZU1P20160 251 aa13.43□□□□□ -0.26
TRAPPC6A-201ENST00000006275 FAM74A1Q5RGS3 127 aa13.43□□□□□ -0.26
TRAPPC6A-201ENST00000006275 UBE2DNLQ8IWF7 75 aa13.43□□□□□ -0.26
TRAPPC6A-201ENST00000006275 NIPSNAP3BQ9BS92 247 aa13.43□□□□□ -0.26
TRAPPC6A-201ENST00000006275 ACTR3CQ9C0K3 210 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC6A-201ENST00000006275 OTORQ9NRC9 128 aa13.43□□□□□ -0.26
TRAPPC6A-201ENST00000006275 PKD1P98161 4303 aa13.42□□□□□ -0.26
TRAPPC6A-201ENST00000006275 TRAV12-3A0A0B4J271 114 aa13.42□□□□□ -0.26
TRAPPC6A-201ENST00000006275 HMSDA8MTL9 139 aa13.42□□□□□ -0.26
TRAPPC6A-201ENST00000006275 SLC25A5P05141 298 aaKnown RBP13.42□□□□□ -0.26
TRAPPC6A-201ENST00000006275 KCNRGQ8N5I3 272 aa13.42□□□□□ -0.26
TRAPPC6A-201ENST00000006275 OR11H4Q8NGC9 324 aa13.42□□□□□ -0.26
TRAPPC6A-201ENST00000006275 CMTM2Q8TAZ6 248 aa13.42□□□□□ -0.26
TRAPPC6A-201ENST00000006275 RXFP4Q8TDU9 374 aa13.42□□□□□ -0.26
TRAPPC6A-201ENST00000006275 C16orf74Q96GX8 76 aa13.42□□□□□ -0.26
TRAPPC6A-201ENST00000006275 FAM19A4Q96LR4 140 aa13.42□□□□□ -0.26
TRAPPC6A-201ENST00000006275 HYLS1Q96M11 299 aa13.42□□□□□ -0.26
TRAPPC6A-201ENST00000006275 CYTL1Q9NRR1 136 aa13.42□□□□□ -0.26
TRAPPC6A-201ENST00000006275 C7orf71A4D174 169 aa13.41□□□□□ -0.26
TRAPPC6A-201ENST00000006275 RBAKDNA6NC62 111 aa13.41□□□□□ -0.26
TRAPPC6A-201ENST00000006275 ZNF345Q14585 488 aa13.41□□□□□ -0.26
TRAPPC6A-201ENST00000006275 AKR1C8PQ5T2L2 129 aa13.41□□□□□ -0.26
TRAPPC6A-201ENST00000006275 Q6ZR54 194 aa13.41□□□□□ -0.26
TRAPPC6A-201ENST00000006275 MAPKAPK5-AS1Q8N8E1 139 aa13.41□□□□□ -0.26
TRAPPC6A-201ENST00000006275 ARPC5LQ9BPX5 153 aa13.41□□□□□ -0.26
TRAPPC6A-201ENST00000006275 ZNF492Q9P255 531 aa13.41□□□□□ -0.26
TRAPPC6A-201ENST00000006275 KLLNB2CW77 178 aa13.4□□□□□ -0.26
TRAPPC6A-201ENST00000006275 DIRC3C9JPN6 131 aa13.4□□□□□ -0.26
TRAPPC6A-201ENST00000006275 CXorf1O96002 111 aa13.4□□□□□ -0.26
TRAPPC6A-201ENST00000006275 CRISP2P16562 243 aa13.4□□□□□ -0.26
TRAPPC6A-201ENST00000006275 GCHFRP30047 84 aa13.4□□□□□ -0.26
TRAPPC6A-201ENST00000006275 CCDC28AQ8IWP9 274 aa13.4□□□□□ -0.26
TRAPPC6A-201ENST00000006275 RPH3ALQ9UNE2 315 aa13.4□□□□□ -0.26
TRAPPC6A-201ENST00000006275 A0A0D9SG52 128 aa13.39□□□□□ -0.27
TRAPPC6A-201ENST00000006275 LYRM9A8MSI8 78 aa13.39□□□□□ -0.27
TRAPPC6A-201ENST00000006275 GPX1P07203 203 aa13.39□□□□□ -0.27
TRAPPC6A-201ENST00000006275 ZNF138P52744 262 aa13.39□□□□□ -0.27
TRAPPC6A-201ENST00000006275 DAD1P61803 113 aa13.39□□□□□ -0.27
TRAPPC6A-201ENST00000006275 BTN1A1Q13410 526 aa13.39□□□□□ -0.27
TRAPPC6A-201ENST00000006275 ZNF493Q6ZR52 646 aa13.39□□□□□ -0.27
TRAPPC6A-201ENST00000006275 TMEM263Q8WUH6 116 aaKnown RBP13.39□□□□□ -0.27
TRAPPC6A-201ENST00000006275 CTXND1A0A1B0GTU2 59 aa13.38□□□□□ -0.27
TRAPPC6A-201ENST00000006275 PLAC8L1A1L4L8 177 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms