RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 TMEM131Q92545 1883 aa8.17□□□□□ -1.1
NIPAL3-201ENST00000003912 SLC25A20O43772 301 aa8.17□□□□□ -1.1
NIPAL3-201ENST00000003912 APOMO95445 188 aa8.17□□□□□ -1.1
NIPAL3-201ENST00000003912 SS18Q15532 418 aa8.17□□□□□ -1.1
NIPAL3-201ENST00000003912 DEFB136Q30KP8 78 aa8.17□□□□□ -1.1
NIPAL3-201ENST00000003912 K7ERU9 68 aa8.16□□□□□ -1.1
NIPAL3-201ENST00000003912 IGKCP01834 107 aa8.16□□□□□ -1.1
NIPAL3-201ENST00000003912 C5orf56Q8N8D9 126 aa8.16□□□□□ -1.1
NIPAL3-201ENST00000003912 LINC00479Q96M42 142 aa8.16□□□□□ -1.1
NIPAL3-201ENST00000003912 SPAG8Q99932 426 aaPredicted RBP8.16□□□□□ -1.1
NIPAL3-201ENST00000003912 GAGE12BA1L429 117 aa8.16□□□□□ -1.1
NIPAL3-201ENST00000003912 CLPSL1A2RUU4 121 aa8.16□□□□□ -1.1
NIPAL3-201ENST00000003912 GAGE7O76087 117 aa8.16□□□□□ -1.1
NIPAL3-201ENST00000003912 GAGE12FP0CL80 117 aa8.16□□□□□ -1.1
NIPAL3-201ENST00000003912 GAGE12GP0CL81 117 aa8.16□□□□□ -1.1
NIPAL3-201ENST00000003912 GAGE12IP0CL82 117 aa8.16□□□□□ -1.1
NIPAL3-201ENST00000003912 CFHR3Q02985 330 aa8.16□□□□□ -1.1
NIPAL3-201ENST00000003912 ATRAIDQ6UW56 229 aa8.16□□□□□ -1.1
NIPAL3-201ENST00000003912 PHLDA1Q8WV24 401 aaPredicted RBP8.16□□□□□ -1.1
NIPAL3-201ENST00000003912 SIRPDQ9H106 197 aa8.16□□□□□ -1.1
NIPAL3-201ENST00000003912 WIPF3A6NGB9 483 aa8.16□□□□□ -1.1
NIPAL3-201ENST00000003912 PRSS57Q6UWY2 283 aa8.16□□□□□ -1.1
NIPAL3-201ENST00000003912 KIAA1549LQ6ZVL6 1849 aa8.16□□□□□ -1.1
NIPAL3-201ENST00000003912 MED13LQ71F56 2210 aa8.16□□□□□ -1.1
NIPAL3-201ENST00000003912 NOTCH2Q04721 2471 aa8.16□□□□□ -1.1
NIPAL3-201ENST00000003912 MRPL16Q9NX20 251 aaKnown RBP8.16□□□□□ -1.1
NIPAL3-201ENST00000003912 Q8N7P7 452 aa8.16□□□□□ -1.1
NIPAL3-201ENST00000003912 RASL10AQ92737 203 aa8.16□□□□□ -1.1
NIPAL3-201ENST00000003912 SPXQ9BT56 116 aa8.16□□□□□ -1.1
NIPAL3-201ENST00000003912 PLNP26678 52 aa8.15□□□□□ -1.1
NIPAL3-201ENST00000003912 Q8N9W7 124 aa8.15□□□□□ -1.1
NIPAL3-201ENST00000003912 ZNF114Q8NC26 417 aa8.15□□□□□ -1.1
NIPAL3-201ENST00000003912 C8orf49Q96NF6 230 aa8.15□□□□□ -1.1
NIPAL3-201ENST00000003912 PRR25Q96S07 402 aa8.15□□□□□ -1.1
NIPAL3-201ENST00000003912 TRAV12-2A0A075B6T6 113 aa8.15□□□□□ -1.1
NIPAL3-201ENST00000003912 TMEM89A2RUT3 159 aa8.15□□□□□ -1.1
NIPAL3-201ENST00000003912 FAM231BA6NCW3 169 aa8.15□□□□□ -1.1
NIPAL3-201ENST00000003912 LINC00158P58513 81 aa8.15□□□□□ -1.1
NIPAL3-201ENST00000003912 HAPLN4Q86UW8 402 aa8.15□□□□□ -1.1
NIPAL3-201ENST00000003912 GAGE12JA6NER3 117 aa8.15□□□□□ -1.11
NIPAL3-201ENST00000003912 GP9P14770 177 aa8.15□□□□□ -1.11
NIPAL3-201ENST00000003912 SLURP1P55000 103 aa8.15□□□□□ -1.11
NIPAL3-201ENST00000003912 GAGE1Q13065 139 aa8.15□□□□□ -1.11
NIPAL3-201ENST00000003912 GAGE4Q13068 117 aa8.15□□□□□ -1.11
NIPAL3-201ENST00000003912 GAGE5Q13069 117 aa8.15□□□□□ -1.11
NIPAL3-201ENST00000003912 MSMPQ1L6U9 139 aa8.15□□□□□ -1.11
NIPAL3-201ENST00000003912 GAGE13Q4V321 117 aa8.15□□□□□ -1.11
NIPAL3-201ENST00000003912 MRAPQ8TCY5 172 aa8.15□□□□□ -1.11
NIPAL3-201ENST00000003912 SLAQ13239 276 aa8.15□□□□□ -1.11
NIPAL3-201ENST00000003912 EP400Q96L91 3159 aa8.15□□□□□ -1.11
NIPAL3-201ENST00000003912 IGLV1-47P01700 117 aa8.14□□□□□ -1.11
NIPAL3-201ENST00000003912 MYCNOSP40205 109 aa8.14□□□□□ -1.11
NIPAL3-201ENST00000003912 CT83Q5H943 113 aa8.14□□□□□ -1.11
NIPAL3-201ENST00000003912 DMRTA1Q5VZB9 504 aa8.14□□□□□ -1.11
NIPAL3-201ENST00000003912 OR2K2Q8NGT1 345 aa8.14□□□□□ -1.11
NIPAL3-201ENST00000003912 LOC102724200A0A096LPH7 203 aaPredicted RBP8.14□□□□□ -1.11
NIPAL3-201ENST00000003912 TRBV25-1A0A075B6N4 114 aa8.14□□□□□ -1.11
NIPAL3-201ENST00000003912 ANXA2RQ3ZCQ2 193 aa8.14□□□□□ -1.11
NIPAL3-201ENST00000003912 C14orf144Q96I85 54 aa8.14□□□□□ -1.11
NIPAL3-201ENST00000003912 CD300EQ496F6 205 aaPredicted RBP8.14□□□□□ -1.11
NIPAL3-201ENST00000003912 AMN1Q8IY45 258 aa8.14□□□□□ -1.11
NIPAL3-201ENST00000003912 TMEM256Q8N2U0 113 aa8.14□□□□□ -1.11
NIPAL3-201ENST00000003912 IGFBPL1Q8WX77 278 aa8.14□□□□□ -1.11
NIPAL3-201ENST00000003912 FNDC4Q9H6D8 234 aaPredicted RBP8.14□□□□□ -1.11
NIPAL3-201ENST00000003912 ABCA1O95477 2261 aa8.14□□□□□ -1.11
NIPAL3-201ENST00000003912 CACNA1AO00555 2505 aa8.13□□□□□ -1.11
NIPAL3-201ENST00000003912 MED13Q9UHV7 2174 aa8.13□□□□□ -1.11
NIPAL3-201ENST00000003912 TRAV9-2A0A087WT02 112 aa8.13□□□□□ -1.11
NIPAL3-201ENST00000003912 PRSS46E5RG02 174 aa8.13□□□□□ -1.11
NIPAL3-201ENST00000003912 SNAI2O43623 268 aa8.13□□□□□ -1.11
NIPAL3-201ENST00000003912 SSBP2P81877 361 aaPredicted RBP8.13□□□□□ -1.11
NIPAL3-201ENST00000003912 C6orf226Q5I0X4 101 aa8.13□□□□□ -1.11
NIPAL3-201ENST00000003912 PLEKHB2Q96CS7 222 aa8.13□□□□□ -1.11
NIPAL3-201ENST00000003912 MRPL53Q96EL3 112 aaKnown RBP8.13□□□□□ -1.11
NIPAL3-201ENST00000003912 IGLV11-55A0A075B6I3 123 aa8.13□□□□□ -1.11
NIPAL3-201ENST00000003912 C10orf142B7Z368 130 aa8.13□□□□□ -1.11
NIPAL3-201ENST00000003912 AJUBAQ96IF1 538 aa8.13□□□□□ -1.11
NIPAL3-201ENST00000003912 ZNF815PA8K554 130 aa8.13□□□□□ -1.11
NIPAL3-201ENST00000003912 LMO4P61968 165 aa8.13□□□□□ -1.11
NIPAL3-201ENST00000003912 ZNF106Q9H2Y7 1883 aaKnown RBP8.13□□□□□ -1.11
NIPAL3-201ENST00000003912 TNFRSF13BO14836 293 aaPredicted RBP8.13□□□□□ -1.11
NIPAL3-201ENST00000003912 RMI2Q96E14 147 aa8.13□□□□□ -1.11
NIPAL3-201ENST00000003912 C11orf68Q9H3H3 251 aaKnown RBP8.13□□□□□ -1.11
NIPAL3-201ENST00000003912 TRAV13-1A0A0B4J241 112 aa8.12□□□□□ -1.11
NIPAL3-201ENST00000003912 IGHV3-16A0A0C4DH30 117 aa8.12□□□□□ -1.11
NIPAL3-201ENST00000003912 S100A7L2Q5SY68 101 aa8.12□□□□□ -1.11
NIPAL3-201ENST00000003912 EREGO14944 169 aa8.12□□□□□ -1.11
NIPAL3-201ENST00000003912 PRR20EP86478 221 aa8.12□□□□□ -1.11
NIPAL3-201ENST00000003912 PRR20CP86479 221 aa8.12□□□□□ -1.11
NIPAL3-201ENST00000003912 PRR20DP86480 221 aa8.12□□□□□ -1.11
NIPAL3-201ENST00000003912 PRR20BP86481 221 aa8.12□□□□□ -1.11
NIPAL3-201ENST00000003912 PRR20AP86496 221 aa8.12□□□□□ -1.11
NIPAL3-201ENST00000003912 DEFB104AQ8WTQ1 72 aa8.12□□□□□ -1.11
NIPAL3-201ENST00000003912 ANKHD1Q8IWZ3 2542 aaKnown RBP8.12□□□□□ -1.11
NIPAL3-201ENST00000003912 IGHV3-64A0A075B6Q5 118 aa8.12□□□□□ -1.11
NIPAL3-201ENST00000003912 TEX48A0A1B0GUV7 120 aa8.12□□□□□ -1.11
NIPAL3-201ENST00000003912 CD5LO43866 347 aa8.12□□□□□ -1.11
NIPAL3-201ENST00000003912 HIST1H2BKO60814 126 aa8.12□□□□□ -1.11
NIPAL3-201ENST00000003912 IGHG2P01859 326 aa8.12□□□□□ -1.11
NIPAL3-201ENST00000003912 HIST1H2BJP06899 126 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms