RNA–Protein interactions for RNA: ENST00000003302.8

USP28-201, Transcript of ubiquitin specific peptidase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP28, Length 4,669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-201ENST00000003302 J3KRW8 73 aa8.29□□□□□ -1.08
USP28-201ENST00000003302 TRGV3P03979 118 aa8.29□□□□□ -1.08
USP28-201ENST00000003302 CD3EP07766 207 aa8.29□□□□□ -1.08
USP28-201ENST00000003302 PRSS3P2Q8NHM4 247 aa8.29□□□□□ -1.08
USP28-201ENST00000003302 TMEM30BQ3MIR4 351 aa8.29□□□□□ -1.08
USP28-201ENST00000003302 CT83Q5H943 113 aa8.29□□□□□ -1.08
USP28-201ENST00000003302 ZNF738Q8NE65 137 aa8.29□□□□□ -1.08
USP28-201ENST00000003302 KIR3DS1Q14943 382 aa8.28□□□□□ -1.08
USP28-201ENST00000003302 JMJD1CQ15652 2540 aa8.28□□□□□ -1.08
USP28-201ENST00000003302 WI2-2373I1.2A0A1W2PRP0 233 aa8.28□□□□□ -1.08
USP28-201ENST00000003302 SLC25A34Q6PIV7 304 aa8.28□□□□□ -1.08
USP28-201ENST00000003302 TMEM14CQ9P0S9 112 aa8.28□□□□□ -1.08
USP28-201ENST00000003302 GPR183P32249 361 aa8.27□□□□□ -1.08
USP28-201ENST00000003302 C5orf64Q2M2E5 130 aa8.27□□□□□ -1.08
USP28-201ENST00000003302 MRPL52Q86TS9 123 aaKnown RBP8.27□□□□□ -1.08
USP28-201ENST00000003302 RAB37Q96AX2 223 aa8.27□□□□□ -1.08
USP28-201ENST00000003302 CHCHD1Q96BP2 118 aaKnown RBP8.27□□□□□ -1.08
USP28-201ENST00000003302 RABAC1Q9UI14 185 aa8.27□□□□□ -1.08
USP28-201ENST00000003302 RELQ04864 619 aaPredicted RBP8.27□□□□□ -1.09
USP28-201ENST00000003302 IL17RELQ6ZVW7 336 aa8.27□□□□□ -1.09
USP28-201ENST00000003302 AJUBAQ96IF1 538 aa8.27□□□□□ -1.09
USP28-201ENST00000003302 ADORA2A-AS1P86434 159 aa8.27□□□□□ -1.09
USP28-201ENST00000003302 PRR25Q96S07 402 aa8.27□□□□□ -1.09
USP28-201ENST00000003302 MAP1LC3CQ9BXW4 147 aa8.27□□□□□ -1.09
USP28-201ENST00000003302 GFRA4Q9GZZ7 299 aa8.27□□□□□ -1.09
USP28-201ENST00000003302 MUC4Q99102 2169 aa8.27□□□□□ -1.09
USP28-201ENST00000003302 IGHV7-81A0A0B4J1V7 117 aa8.27□□□□□ -1.09
USP28-201ENST00000003302 LIPFP07098 398 aa8.27□□□□□ -1.09
USP28-201ENST00000003302 LCNL1Q6ZST4 164 aa8.27□□□□□ -1.09
USP28-201ENST00000003302 DEFB125Q8N687 156 aa8.27□□□□□ -1.09
USP28-201ENST00000003302 B9A039 149 aa8.26□□□□□ -1.09
USP28-201ENST00000003302 EDN2P20800 178 aa8.26□□□□□ -1.09
USP28-201ENST00000003302 TMEM219Q86XT9 240 aa8.26□□□□□ -1.09
USP28-201ENST00000003302 LY6G5BQ8NDX9 201 aa8.26□□□□□ -1.09
USP28-201ENST00000003302 RNF185Q96GF1 192 aa8.26□□□□□ -1.09
USP28-201ENST00000003302 DPM3Q9P2X0 92 aa8.26□□□□□ -1.09
USP28-201ENST00000003302 OR5AL1P0C617 328 aa8.26□□□□□ -1.09
USP28-201ENST00000003302 ECSCRQ19T08 205 aa8.26□□□□□ -1.09
USP28-201ENST00000003302 VMO1Q7Z5L0 202 aa8.26□□□□□ -1.09
USP28-201ENST00000003302 NAV2Q8IVL1 2488 aa8.26□□□□□ -1.09
USP28-201ENST00000003302 TWIST1Q15672 202 aa8.26□□□□□ -1.09
USP28-201ENST00000003302 ST20Q9HBF5 79 aa8.26□□□□□ -1.09
USP28-201ENST00000003302 OR4C5Q8NGB2 326 aa8.26□□□□□ -1.09
USP28-201ENST00000003302 PRELID3AQ96N28 172 aa8.26□□□□□ -1.09
USP28-201ENST00000003302 THYN1Q9P016 225 aa8.26□□□□□ -1.09
USP28-201ENST00000003302 PRR9Q5T870 116 aa8.25□□□□□ -1.09
USP28-201ENST00000003302 FAM104BQ5XKR9 115 aa8.25□□□□□ -1.09
USP28-201ENST00000003302 NDUFA3O95167 84 aa8.25□□□□□ -1.09
USP28-201ENST00000003302 MSRB2Q9Y3D2 182 aa8.25□□□□□ -1.09
USP28-201ENST00000003302 WNK1Q9H4A3 2382 aa8.25□□□□□ -1.09
USP28-201ENST00000003302 K7ERJ3 54 aa8.25□□□□□ -1.09
USP28-201ENST00000003302 C21orf62Q9NYP8 219 aa8.25□□□□□ -1.09
USP28-201ENST00000003302 ANKRD17O75179 2603 aaKnown RBP8.24□□□□□ -1.09
USP28-201ENST00000003302 IGKV3D-20A0A0C4DH25 116 aa8.24□□□□□ -1.09
USP28-201ENST00000003302 CLPSL1A2RUU4 121 aa8.24□□□□□ -1.09
USP28-201ENST00000003302 FAM231BA6NCW3 169 aa8.24□□□□□ -1.09
USP28-201ENST00000003302 ARPC1AQ92747 370 aa8.24□□□□□ -1.09
USP28-201ENST00000003302 TRBV12-3P01733 135 aa8.24□□□□□ -1.09
USP28-201ENST00000003302 CLEC3BP05452 202 aa8.24□□□□□ -1.09
USP28-201ENST00000003302 NMUP48645 174 aa8.24□□□□□ -1.09
USP28-201ENST00000003302 C15orf32Q32M92 178 aa8.24□□□□□ -1.09
USP28-201ENST00000003302 FA2HQ7L5A8 372 aa8.24□□□□□ -1.09
USP28-201ENST00000003302 OR10AG1Q8NH19 301 aa8.24□□□□□ -1.09
USP28-201ENST00000003302 SMIM12Q96EX1 92 aa8.24□□□□□ -1.09
USP28-201ENST00000003302 TMEM191AQ9H0A3 160 aa8.24□□□□□ -1.09
USP28-201ENST00000003302 TMEM189A5PLL7 270 aa8.24□□□□□ -1.09
USP28-201ENST00000003302 ODF3BA8MYP8 253 aa8.24□□□□□ -1.09
USP28-201ENST00000003302 ORM1P02763 201 aa8.24□□□□□ -1.09
USP28-201ENST00000003302 CCDC168Q8NDH2 2452 aa8.24□□□□□ -1.09
USP28-201ENST00000003302 COX8AP10176 69 aa8.24□□□□□ -1.09
USP28-201ENST00000003302 ATP6V0E1O15342 81 aa8.23□□□□□ -1.09
USP28-201ENST00000003302 Q8N9W7 124 aa8.23□□□□□ -1.09
USP28-201ENST00000003302 CCDC140Q96MF4 163 aa8.23□□□□□ -1.09
USP28-201ENST00000003302 NHLH1Q02575 133 aa8.23□□□□□ -1.09
USP28-201ENST00000003302 OR11H6Q8NGC7 330 aa8.23□□□□□ -1.09
USP28-201ENST00000003302 IGKV3-7A0A075B6H7 116 aa8.23□□□□□ -1.09
USP28-201ENST00000003302 C7orf71A4D174 169 aa8.23□□□□□ -1.09
USP28-201ENST00000003302 CST9LQ9H4G1 147 aa8.23□□□□□ -1.09
USP28-201ENST00000003302 CKS2P33552 79 aa8.22□□□□□ -1.09
USP28-201ENST00000003302 PAX2Q02962 417 aa8.22□□□□□ -1.09
USP28-201ENST00000003302 PET117Q6UWS5 81 aa8.22□□□□□ -1.09
USP28-201ENST00000003302 Q6ZS46 218 aa8.22□□□□□ -1.09
USP28-201ENST00000003302 WFDC12Q8WWY7 111 aa8.22□□□□□ -1.09
USP28-201ENST00000003302 RAXQ9Y2V3 346 aa8.22□□□□□ -1.09
USP28-201ENST00000003302 CLEC19AQ6UXS0 136 aa8.22□□□□□ -1.09
USP28-201ENST00000003302 ZNF562Q6V9R5 426 aa8.22□□□□□ -1.09
USP28-201ENST00000003302 ZNF493Q6ZR52 646 aa8.22□□□□□ -1.09
USP28-201ENST00000003302 MTURNQ8N3F0 131 aa8.22□□□□□ -1.09
USP28-201ENST00000003302 IGLC6P0CF74 106 aa8.22□□□□□ -1.09
USP28-201ENST00000003302 EFNA4P52798 201 aa8.22□□□□□ -1.09
USP28-201ENST00000003302 FAM162BQ5T6X4 162 aa8.22□□□□□ -1.09
USP28-201ENST00000003302 NPBQ8NG41 125 aa8.22□□□□□ -1.09
USP28-201ENST00000003302 RIGQ13278 110 aa8.21□□□□□ -1.09
USP28-201ENST00000003302 VKORC1Q9BQB6 163 aa8.21□□□□□ -1.09
USP28-201ENST00000003302 ZFAND3Q9H8U3 227 aa8.21□□□□□ -1.09
USP28-201ENST00000003302 TRAV8-2A0A0B4J237 113 aa8.21□□□□□ -1.09
USP28-201ENST00000003302 H3BUT2 72 aa8.21□□□□□ -1.09
USP28-201ENST00000003302 K7ENP7 123 aa8.21□□□□□ -1.09
USP28-201ENST00000003302 GAGE12BA1L429 117 aa8.21□□□□□ -1.1
USP28-201ENST00000003302 F6UB75 175 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms