RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Prss37Q9DAA4 237 aa12.56□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Gm45785A0A1B0GT05 94 aa12.55□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Bet1lO35153 111 aa12.55□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Tcl1b1P56840 116 aa12.55□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Ctsll3Q3ULP7 331 aa12.55□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Samd10Q7TST3 202 aa12.55□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Plppr1Q8BFZ2 325 aa12.55□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Elovl5Q8BHI7 299 aa12.55□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Klre1Q8CJC7 226 aa12.55□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Olfr1441Q8VFV3 318 aa12.55□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Sec11aQ9R0P6 179 aa12.55□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Atp6v0cP63082 155 aa12.55□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Znf664Q4VA44 261 aa12.55□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 MmdQ9CQY7 238 aa12.55□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 4930583I09RikQ9D2E3 102 aa12.55□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 AplnrQ9WV08 377 aa12.55□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Znf329Q6GQR8 522 aa12.55□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Hamp2Q80T19 83 aa12.55□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Ammecr1lQ8JZZ6 310 aa12.55□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Trem3Q9JKE1 183 aa12.55□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Trpm6Q8CIR4 2028 aa12.55□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Gm6970F7DCP6 221 aa12.55□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 A630095N17RikJ3KMM7 116 aa12.55□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Olfr1434Q7TQR9 312 aa12.55□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Olfr1443Q8VFW8 312 aa12.55□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 TriobpQ99KW3 2014 aa12.55□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 E430018J23RikE9PZQ8 461 aa12.55□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Klrd1O54707 179 aa12.55□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Ins1P01325 108 aa12.55□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Q3UZV7 1028 aa12.55□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Rhbdd1Q8BHC7 315 aa12.55□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Olfr365Q8VFT2 312 aa12.55□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Igkv9-124A0A0G2JDR3 117 aa12.54□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Tnfsf11O35235 316 aa12.54□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Vamp8O70404 101 aa12.54□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Psmg4P0C7N9 123 aa12.54□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 PirtQ8BFY0 135 aa12.54□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Ly6g6eQ8K1T6 166 aa12.54□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Erg28Q9ERY9 140 aa12.54□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Fbxw4Q9JMJ2 410 aa12.54□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Ighv7-1A0A075B5S2 121 aa12.54□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Gm5157A0A087WRH8 301 aa12.54□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Olfr177E9Q7W1 309 aa12.54□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Ltbp3Q61810 1268 aa12.54□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Prrg4Q8BGN6 226 aa12.54□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Hes7Q8BKT2 225 aa12.54□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Olfr958Q8VEY3 312 aa12.54□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Cd200r1Q9ES57 326 aa12.54□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Pglyrp3A1A547 347 aa12.54□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Gm21775J3KMK6 180 aa12.54□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Cdx2P43241 311 aa12.54□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Bsph1Q3UW26 133 aa12.54□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Psg16Q8K0U8 395 aa12.54□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Tff1Q08423 87 aa12.54□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Polr3kQ9CQZ7 108 aa12.54□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Dock11A2AF47 2073 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Tcrg-C2A0A075B5Z2 167 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Gm20458E9PXJ7 78 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Mmp23O88676 391 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 P01853 167 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Znf385aQ8VD12 386 aaKnown RBP12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Hyls1Q9CXX0 307 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Ascl3Q9JJR7 174 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Arid1aA2BH40 2283 aaKnown RBP12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Trav7-4A0A075B6C1 113 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Olfr753-ps1A0A140LHN3 164 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Trav7d-4Q5R1H9 113 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 MiaQ61865 130 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Olfr93Q6UAH1 312 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Slamf7Q8BHK6 333 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Ifi27Q8C6G0 260 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Gatad1Q920S3 266 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Defa-rs7P50715 91 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Gimap1P70224 277 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Lhfpl4Q5U4E0 247 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Cphx2Q8BX39 182 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Cd300eQ8K249 196 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Defb8Q91V82 60 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Rnf126Q91YL2 313 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Ly96Q9JHF9 160 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Gm35315A0A1B0GRI2 571 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Tnfaip6O08859 275 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Rnase9P60154 184 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Prrx2Q06348 247 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Tbr1Q64336 681 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Ccsmst1Q6RUT7 136 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Alkbh6Q8K2U2 238 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Nabp2Q8R2Y9 212 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Mrpl51Q9CPY1 128 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Spata45Q9CVW4 97 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Chchd2Q9D1L0 153 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 1700013G24RikQ9DAC6 286 aa12.53□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Cd209gD3Z5D4 194 aa12.52□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Ms4a13Q5FWC3 203 aa12.52□□□□□ -0.4
Pcdha1-201ENSMUST00000070797 Prr19B2RW88 366 aa12.52□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Cox19Q8K0C8 92 aa12.52□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Ankrd12G5E893 2041 aa12.52□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Mst1P26928 716 aa12.52□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Gm9Q3UKW5 162 aa12.52□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Khdc1aQ3UWR2 166 aa12.52□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 43.8 ms