RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 EDN2P20800 178 aa9.95□□□□□ -0.82
PHGDH-221ENST00000641573 GNG4P50150 75 aa9.95□□□□□ -0.82
PHGDH-221ENST00000641573 MEOX2P50222 304 aa9.95□□□□□ -0.82
PHGDH-221ENST00000641573 SLURP1P55000 103 aa9.95□□□□□ -0.82
PHGDH-221ENST00000641573 PROK1P58294 105 aa9.95□□□□□ -0.82
PHGDH-221ENST00000641573 KLF5Q13887 457 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-221ENST00000641573 CENPWQ5EE01 88 aa9.95□□□□□ -0.82
PHGDH-221ENST00000641573 LINC01551Q86U37 167 aa9.95□□□□□ -0.82
PHGDH-221ENST00000641573 CITED2Q99967 270 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-221ENST00000641573 ZNF331Q9NQX6 463 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-221ENST00000641573 M0QZ24 198 aa9.94□□□□□ -0.82
PHGDH-221ENST00000641573 M0R3E3 92 aa9.94□□□□□ -0.82
PHGDH-221ENST00000641573 S100A9P06702 114 aaKnown RBP9.94□□□□□ -0.82
PHGDH-221ENST00000641573 BMI1P35226 326 aa9.94□□□□□ -0.82
PHGDH-221ENST00000641573 CSN1S1P47710 185 aa9.94□□□□□ -0.82
PHGDH-221ENST00000641573 TMEM183BQ1AE95 376 aa9.94□□□□□ -0.82
PHGDH-221ENST00000641573 IGFL4Q6B9Z1 124 aa9.94□□□□□ -0.82
PHGDH-221ENST00000641573 TMEM88Q6PEY1 159 aa9.94□□□□□ -0.82
PHGDH-221ENST00000641573 C8orf86Q6ZUL3 223 aa9.94□□□□□ -0.82
PHGDH-221ENST00000641573 GOLT1AQ6ZVE7 132 aa9.94□□□□□ -0.82
PHGDH-221ENST00000641573 CBLN2Q8IUK8 224 aa9.94□□□□□ -0.82
PHGDH-221ENST00000641573 OCC1Q8TAD7 63 aa9.94□□□□□ -0.82
PHGDH-221ENST00000641573 IGF2BP2-AS1Q96M15 143 aa9.94□□□□□ -0.82
PHGDH-221ENST00000641573 DUX3Q96PT4 197 aa9.94□□□□□ -0.82
PHGDH-221ENST00000641573 SLC50A1Q9BRV3 221 aa9.94□□□□□ -0.82
PHGDH-221ENST00000641573 AURKAIP1Q9NWT8 199 aaPredicted RBP9.94□□□□□ -0.82
PHGDH-221ENST00000641573 KLF12Q9Y4X4 402 aa9.94□□□□□ -0.82
PHGDH-221ENST00000641573 TSSC4Q9Y5U2 329 aaPredicted RBP9.94□□□□□ -0.82
PHGDH-221ENST00000641573 LY96Q9Y6Y9 160 aa9.94□□□□□ -0.82
PHGDH-221ENST00000641573 A0A087WWC5 75 aa9.93□□□□□ -0.82
PHGDH-221ENST00000641573 A0A1W2PRX2 142 aa9.93□□□□□ -0.82
PHGDH-221ENST00000641573 DIRC3C9JPN6 131 aa9.93□□□□□ -0.82
PHGDH-221ENST00000641573 ISLRO14498 428 aa9.93□□□□□ -0.82
PHGDH-221ENST00000641573 HLA-DMBP28068 263 aa9.93□□□□□ -0.82
PHGDH-221ENST00000641573 UBE2G1P62253 170 aa9.93□□□□□ -0.82
PHGDH-221ENST00000641573 FMC1Q96HJ9 113 aa9.93□□□□□ -0.82
PHGDH-221ENST00000641573 SGK494Q96LW2 274 aa9.93□□□□□ -0.82
PHGDH-221ENST00000641573 SMCO4Q9NRQ5 59 aa9.93□□□□□ -0.82
PHGDH-221ENST00000641573 TRAV8-2A0A0B4J237 113 aa9.92□□□□□ -0.82
PHGDH-221ENST00000641573 C2orf70A6NJV1 201 aa9.92□□□□□ -0.82
PHGDH-221ENST00000641573 TSPAN4O14817 238 aa9.92□□□□□ -0.82
PHGDH-221ENST00000641573 IGLV2-8P01709 118 aa9.92□□□□□ -0.82
PHGDH-221ENST00000641573 MT-ND4LP03901 98 aa9.92□□□□□ -0.82
PHGDH-221ENST00000641573 RNF212Q495C1 297 aa9.92□□□□□ -0.82
PHGDH-221ENST00000641573 TCF24Q7RTU0 167 aa9.92□□□□□ -0.82
PHGDH-221ENST00000641573 BAGE2Q86Y30 109 aa9.92□□□□□ -0.82
PHGDH-221ENST00000641573 ARL6IP6Q8N6S5 226 aa9.92□□□□□ -0.82
PHGDH-221ENST00000641573 ISOC2Q96AB3 205 aa9.92□□□□□ -0.82
PHGDH-221ENST00000641573 RAX2Q96IS3 184 aa9.92□□□□□ -0.82
PHGDH-221ENST00000641573 C16orf92Q96LL3 132 aa9.92□□□□□ -0.82
PHGDH-221ENST00000641573 PRELID1Q9Y255 219 aa9.92□□□□□ -0.82
PHGDH-221ENST00000641573 SELENOKQ9Y6D0 94 aa9.92□□□□□ -0.82
PHGDH-221ENST00000641573 TRBV6-1A0A0K0K1D8 114 aa9.91□□□□□ -0.82
PHGDH-221ENST00000641573 K7EN84 100 aa9.91□□□□□ -0.82
PHGDH-221ENST00000641573 K7EQM0 130 aa9.91□□□□□ -0.82
PHGDH-221ENST00000641573 PRB4P10163 310 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-221ENST00000641573 CBLN1P23435 193 aa9.91□□□□□ -0.82
PHGDH-221ENST00000641573 RPL11P62913 178 aaKnown RBP9.91□□□□□ -0.82
PHGDH-221ENST00000641573 LCN12Q6JVE5 192 aa9.91□□□□□ -0.82
PHGDH-221ENST00000641573 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-221ENST00000641573 CTDSP1Q9GZU7 261 aa9.91□□□□□ -0.82
PHGDH-221ENST00000641573 TRAV8-1A0A0A6YYK1 113 aa9.9□□□□□ -0.82
PHGDH-221ENST00000641573 A0A1B0GUS0 222 aa9.9□□□□□ -0.82
PHGDH-221ENST00000641573 SERTM2A0A1B0GWG4 89 aa9.9□□□□□ -0.82
PHGDH-221ENST00000641573 ZNF705FA8MVS1 300 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-221ENST00000641573 CCL24O00175 119 aa9.9□□□□□ -0.82
PHGDH-221ENST00000641573 IGLV2-11P01706 119 aa9.9□□□□□ -0.82
PHGDH-221ENST00000641573 MGST1P10620 155 aaKnown RBP9.9□□□□□ -0.82
PHGDH-221ENST00000641573 FOLR2P14207 255 aa9.9□□□□□ -0.82
PHGDH-221ENST00000641573 PSG3Q16557 428 aa9.9□□□□□ -0.82
PHGDH-221ENST00000641573 PRNTQ86SH4 94 aa9.9□□□□□ -0.82
PHGDH-221ENST00000641573 Q86TA4 180 aa9.9□□□□□ -0.82
PHGDH-221ENST00000641573 RNF182Q8N6D2 247 aa9.9□□□□□ -0.82
PHGDH-221ENST00000641573 TMEM75Q8N9X5 138 aa9.9□□□□□ -0.82
PHGDH-221ENST00000641573 NHLRC2Q8NBF2 726 aa9.9□□□□□ -0.82
PHGDH-221ENST00000641573 DLX4Q92988 240 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-221ENST00000641573 ANAPC16Q96DE5 110 aa9.9□□□□□ -0.82
PHGDH-221ENST00000641573 MRPL53Q96EL3 112 aaKnown RBP9.9□□□□□ -0.82
PHGDH-221ENST00000641573 NRN1Q9NPD7 142 aa9.9□□□□□ -0.82
PHGDH-221ENST00000641573 CLEC5AQ9NY25 188 aa9.9□□□□□ -0.82
PHGDH-221ENST00000641573 PEMTQ9UBM1 199 aa9.9□□□□□ -0.82
PHGDH-221ENST00000641573 PSG8Q9UQ74 426 aa9.9□□□□□ -0.82
PHGDH-221ENST00000641573 IGKV3-7A0A075B6H7 116 aa9.89□□□□□ -0.83
PHGDH-221ENST00000641573 IGKV2-40A0A087WW87 121 aaPredicted RBP9.89□□□□□ -0.83
PHGDH-221ENST00000641573 H7BYZ3 331 aa9.89□□□□□ -0.83
PHGDH-221ENST00000641573 SOCS3O14543 225 aa9.89□□□□□ -0.83
PHGDH-221ENST00000641573 GCGP01275 180 aa9.89□□□□□ -0.83
PHGDH-221ENST00000641573 LTAP01374 205 aa9.89□□□□□ -0.83
PHGDH-221ENST00000641573 IGKV2D-40P01614 121 aaPredicted RBP9.89□□□□□ -0.83
PHGDH-221ENST00000641573 KRTAP10-3P60369 221 aa9.89□□□□□ -0.83
PHGDH-221ENST00000641573 FLI1Q01543 452 aaPredicted RBP9.89□□□□□ -0.83
PHGDH-221ENST00000641573 OR5I1Q13606 314 aa9.89□□□□□ -0.83
PHGDH-221ENST00000641573 FHL3Q13643 280 aa9.89□□□□□ -0.83
PHGDH-221ENST00000641573 ADAMTSL5Q6ZMM2 481 aa9.89□□□□□ -0.83
PHGDH-221ENST00000641573 OR9G4Q8NGQ1 327 aa9.89□□□□□ -0.83
PHGDH-221ENST00000641573 SFRP2Q96HF1 295 aa9.89□□□□□ -0.83
PHGDH-221ENST00000641573 TUBA4BQ9H853 241 aa9.89□□□□□ -0.83
PHGDH-221ENST00000641573 TMEM242Q9NWH2 141 aa9.89□□□□□ -0.83
PHGDH-221ENST00000641573 ADARB2-AS1A8MUL3 147 aa9.88□□□□□ -0.83
PHGDH-221ENST00000641573 PRAC2D3DTV9 90 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms