RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 RAB32Q13637 225 aa9.78□□□□□ -0.84
LINC00339-211ENST00000641009 OR10J6PQ8NGY7 276 aa9.78□□□□□ -0.84
LINC00339-211ENST00000641009 RNASE8Q8TDE3 154 aaKnown RBP9.78□□□□□ -0.84
LINC00339-211ENST00000641009 SAT2Q96F10 170 aaPredicted RBP9.78□□□□□ -0.84
LINC00339-211ENST00000641009 WDR83OSQ9Y284 106 aa9.78□□□□□ -0.84
LINC00339-211ENST00000641009 TIMM8BQ9Y5J9 83 aaPredicted RBP9.78□□□□□ -0.84
LINC00339-211ENST00000641009 PXMP4Q9Y6I8 212 aa9.78□□□□□ -0.84
LINC00339-211ENST00000641009 J3KRW8 73 aa9.77□□□□□ -0.85
LINC00339-211ENST00000641009 NUDT3O95989 172 aa9.77□□□□□ -0.85
LINC00339-211ENST00000641009 ATP5G1P05496 136 aa9.77□□□□□ -0.85
LINC00339-211ENST00000641009 PVALBP20472 110 aaPredicted RBP9.77□□□□□ -0.85
LINC00339-211ENST00000641009 ATP5G3P48201 142 aa9.77□□□□□ -0.85
LINC00339-211ENST00000641009 BAXQ07812 192 aa9.77□□□□□ -0.85
LINC00339-211ENST00000641009 VWC2Q2TAL6 325 aa9.77□□□□□ -0.85
LINC00339-211ENST00000641009 GFI1BQ5VTD9 330 aa9.77□□□□□ -0.85
LINC00339-211ENST00000641009 TMEM263Q8WUH6 116 aaKnown RBP9.77□□□□□ -0.85
LINC00339-211ENST00000641009 ATG101Q9BSB4 218 aa9.77□□□□□ -0.85
LINC00339-211ENST00000641009 CCDC32Q9BV29 185 aa9.77□□□□□ -0.85
LINC00339-211ENST00000641009 NOP10Q9NPE3 64 aaKnown RBP9.77□□□□□ -0.85
LINC00339-211ENST00000641009 LYRM2Q9NU23 88 aaPredicted RBP9.77□□□□□ -0.85
LINC00339-211ENST00000641009 FAM240BA0A1B0GVZ2 78 aa9.76□□□□□ -0.85
LINC00339-211ENST00000641009 CBY3A6NI87 242 aa9.76□□□□□ -0.85
LINC00339-211ENST00000641009 H7BYZ3 331 aa9.76□□□□□ -0.85
LINC00339-211ENST00000641009 SULT1A1P50225 295 aa9.76□□□□□ -0.85
LINC00339-211ENST00000641009 IL15RAQ13261 267 aa9.76□□□□□ -0.85
LINC00339-211ENST00000641009 ZNF493Q6ZR52 646 aa9.76□□□□□ -0.85
LINC00339-211ENST00000641009 TMEM252Q8N6L7 170 aa9.76□□□□□ -0.85
LINC00339-211ENST00000641009 OR1L4Q8NGR5 311 aa9.76□□□□□ -0.85
LINC00339-211ENST00000641009 PFDN5Q99471 154 aa9.76□□□□□ -0.85
LINC00339-211ENST00000641009 SLC39A9Q9NUM3 307 aa9.76□□□□□ -0.85
LINC00339-211ENST00000641009 ZNF586Q9NXT0 402 aa9.76□□□□□ -0.85
LINC00339-211ENST00000641009 CT45A10P0DMU9 189 aa9.75□□□□□ -0.85
LINC00339-211ENST00000641009 S100A11P31949 105 aa9.75□□□□□ -0.85
LINC00339-211ENST00000641009 RPL29P47914 159 aaKnown RBP9.75□□□□□ -0.85
LINC00339-211ENST00000641009 STX12Q86Y82 276 aa9.75□□□□□ -0.85
LINC00339-211ENST00000641009 C20orf144Q9BQM9 153 aa9.75□□□□□ -0.85
LINC00339-211ENST00000641009 FGF7P21781 194 aa9.74□□□□□ -0.85
LINC00339-211ENST00000641009 HBG1P69891 147 aa9.74□□□□□ -0.85
LINC00339-211ENST00000641009 HBG2P69892 147 aa9.74□□□□□ -0.85
LINC00339-211ENST00000641009 GUK1Q16774 197 aa9.74□□□□□ -0.85
LINC00339-211ENST00000641009 C1orf134Q5TEV5 83 aa9.74□□□□□ -0.85
LINC00339-211ENST00000641009 RNF141Q8WVD5 230 aa9.74□□□□□ -0.85
LINC00339-211ENST00000641009 GPN1Q9HCN4 374 aaPredicted RBP9.74□□□□□ -0.85
LINC00339-211ENST00000641009 TRAV12-3A0A0B4J271 114 aa9.73□□□□□ -0.85
LINC00339-211ENST00000641009 NPIPB6E9PJ23 425 aa9.73□□□□□ -0.85
LINC00339-211ENST00000641009 FAM3BP58499 235 aaPredicted RBP9.73□□□□□ -0.85
LINC00339-211ENST00000641009 SOHLH1Q5JUK2 328 aa9.73□□□□□ -0.85
LINC00339-211ENST00000641009 TRBV19A0A075B6N1 114 aa9.72□□□□□ -0.85
LINC00339-211ENST00000641009 A0A1B0GVG6 124 aa9.72□□□□□ -0.85
LINC00339-211ENST00000641009 M0R3E3 92 aa9.72□□□□□ -0.85
LINC00339-211ENST00000641009 ZNF253O75346 499 aa9.72□□□□□ -0.85
LINC00339-211ENST00000641009 PYYP10082 97 aa9.72□□□□□ -0.85
LINC00339-211ENST00000641009 LEPP41159 167 aa9.72□□□□□ -0.85
LINC00339-211ENST00000641009 GCSAMLQ5JQS6 135 aa9.72□□□□□ -0.85
LINC00339-211ENST00000641009 MZT2BQ6NZ67 158 aa9.72□□□□□ -0.85
LINC00339-211ENST00000641009 CCDC28AQ8IWP9 274 aa9.72□□□□□ -0.85
LINC00339-211ENST00000641009 ZNRF2Q8NHG8 242 aa9.72□□□□□ -0.85
LINC00339-211ENST00000641009 CHAC2Q8WUX2 184 aa9.72□□□□□ -0.85
LINC00339-211ENST00000641009 GAGE12BA1L429 117 aa9.72□□□□□ -0.85
LINC00339-211ENST00000641009 GAGE7O76087 117 aa9.72□□□□□ -0.85
LINC00339-211ENST00000641009 NDUFB4O95168 129 aa9.72□□□□□ -0.85
LINC00339-211ENST00000641009 SIX6O95475 246 aa9.72□□□□□ -0.85
LINC00339-211ENST00000641009 GAGE12FP0CL80 117 aa9.72□□□□□ -0.85
LINC00339-211ENST00000641009 GAGE12GP0CL81 117 aa9.72□□□□□ -0.85
LINC00339-211ENST00000641009 GAGE12IP0CL82 117 aa9.72□□□□□ -0.85
LINC00339-211ENST00000641009 MED14OSP0DP75 135 aa9.72□□□□□ -0.85
LINC00339-211ENST00000641009 NHLH2Q02577 135 aa9.72□□□□□ -0.85
LINC00339-211ENST00000641009 ERCC8Q13216 396 aa9.72□□□□□ -0.85
LINC00339-211ENST00000641009 ASAH1Q13510 395 aa9.72□□□□□ -0.85
LINC00339-211ENST00000641009 OR5I1Q13606 314 aa9.72□□□□□ -0.85
LINC00339-211ENST00000641009 ATP6V1FQ16864 119 aa9.72□□□□□ -0.85
LINC00339-211ENST00000641009 LINC00299Q6ZSB3 139 aa9.72□□□□□ -0.85
LINC00339-211ENST00000641009 LINC00612Q8N6U2 182 aa9.72□□□□□ -0.85
LINC00339-211ENST00000641009 ODF3Q96PU9 254 aa9.72□□□□□ -0.85
LINC00339-211ENST00000641009 NPCDR1Q9BY65 106 aa9.72□□□□□ -0.85
LINC00339-211ENST00000641009 LINC00588Q9Y4M8 146 aa9.72□□□□□ -0.85
LINC00339-211ENST00000641009 NBDYA0A0U1RRE5 68 aa9.71□□□□□ -0.86
LINC00339-211ENST00000641009 SNURFLB1AK76 121 aa9.71□□□□□ -0.86
LINC00339-211ENST00000641009 CCL18P55774 89 aa9.71□□□□□ -0.86
LINC00339-211ENST00000641009 THAP6Q8TBB0 222 aa9.71□□□□□ -0.86
LINC00339-211ENST00000641009 BLNKQ8WV28 456 aa9.71□□□□□ -0.86
LINC00339-211ENST00000641009 TMEM14CQ9P0S9 112 aa9.71□□□□□ -0.86
LINC00339-211ENST00000641009 TRAV26-1A0A087WT03 109 aa9.7□□□□□ -0.86
LINC00339-211ENST00000641009 A0A0J9YY99 117 aa9.7□□□□□ -0.86
LINC00339-211ENST00000641009 MPDU1O75352 247 aa9.7□□□□□ -0.86
LINC00339-211ENST00000641009 RLN2P04090 185 aa9.7□□□□□ -0.86
LINC00339-211ENST00000641009 HIST1H1EP10412 219 aaKnown RBP9.7□□□□□ -0.86
LINC00339-211ENST00000641009 HOXA5P20719 270 aa9.7□□□□□ -0.86
LINC00339-211ENST00000641009 CLINT1Q14677 625 aa9.7□□□□□ -0.86
LINC00339-211ENST00000641009 LRRC37A5PQ49AS3 106 aa9.7□□□□□ -0.86
LINC00339-211ENST00000641009 ZNF575Q86XF7 245 aa9.7□□□□□ -0.86
LINC00339-211ENST00000641009 EXOC3-AS1Q8N2X6 119 aa9.7□□□□□ -0.86
LINC00339-211ENST00000641009 OR5C1Q8NGR4 320 aa9.7□□□□□ -0.86
LINC00339-211ENST00000641009 ENKURQ8TC29 256 aa9.7□□□□□ -0.86
LINC00339-211ENST00000641009 S100ZQ8WXG8 99 aa9.7□□□□□ -0.86
LINC00339-211ENST00000641009 MRPL53Q96EL3 112 aaKnown RBP9.7□□□□□ -0.86
LINC00339-211ENST00000641009 PYGO2Q9BRQ0 406 aa9.7□□□□□ -0.86
LINC00339-211ENST00000641009 OR5AC2Q9NZP5 309 aa9.7□□□□□ -0.86
LINC00339-211ENST00000641009 TIMM9Q9Y5J7 89 aa9.7□□□□□ -0.86
LINC00339-211ENST00000641009 C7orf71A4D174 169 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms