RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 DAZ1Q9NQZ3 744 aaKnown RBP14.04□□□□□ -0.16
SCARB2-223ENST00000640640 TRGV11A0A075B6L2 103 aa14.03□□□□□ -0.16
SCARB2-223ENST00000640640 ARMS2P0C7Q2 107 aa14.03□□□□□ -0.16
SCARB2-223ENST00000640640 IFI27P40305 119 aaPredicted RBP14.03□□□□□ -0.16
SCARB2-223ENST00000640640 EMP1P54849 157 aa14.03□□□□□ -0.16
SCARB2-223ENST00000640640 C1orf194Q5T5A4 169 aa14.03□□□□□ -0.16
SCARB2-223ENST00000640640 GATA3P23771 443 aa14.03□□□□□ -0.16
SCARB2-223ENST00000640640 AMN1Q8IY45 258 aa14.03□□□□□ -0.16
SCARB2-223ENST00000640640 C8orf31Q8N9H6 132 aa14.03□□□□□ -0.16
SCARB2-223ENST00000640640 C2orf88Q9BSF0 95 aa14.03□□□□□ -0.16
SCARB2-223ENST00000640640 VCX2Q9H322 139 aa14.03□□□□□ -0.16
SCARB2-223ENST00000640640 RNF223E7ERA6 249 aa14.02□□□□□ -0.16
SCARB2-223ENST00000640640 TMEM262E9PQX1 116 aa14.02□□□□□ -0.16
SCARB2-223ENST00000640640 IGHV2-70P01814 119 aa14.02□□□□□ -0.16
SCARB2-223ENST00000640640 C11orf52Q96A22 123 aa14.02□□□□□ -0.16
SCARB2-223ENST00000640640 DYSFO75923 2080 aa14.02□□□□□ -0.16
SCARB2-223ENST00000640640 SP5Q6BEB4 398 aaPredicted RBP14.02□□□□□ -0.16
SCARB2-223ENST00000640640 TYMSP04818 313 aa14.02□□□□□ -0.17
SCARB2-223ENST00000640640 MAPK1IP1LQ8NDC0 245 aa14.02□□□□□ -0.17
SCARB2-223ENST00000640640 TMEM101Q96IK0 257 aa14.02□□□□□ -0.17
SCARB2-223ENST00000640640 ERCC8Q13216 396 aa14.02□□□□□ -0.17
SCARB2-223ENST00000640640 GFRA4Q9GZZ7 299 aa14.02□□□□□ -0.17
SCARB2-223ENST00000640640 ZNF492Q9P255 531 aa14.02□□□□□ -0.17
SCARB2-223ENST00000640640 TRAV12-3A0A0B4J271 114 aa14.01□□□□□ -0.17
SCARB2-223ENST00000640640 A0A1B0GUS0 222 aa14.01□□□□□ -0.17
SCARB2-223ENST00000640640 IGLC7A0M8Q6 106 aa14.01□□□□□ -0.17
SCARB2-223ENST00000640640 VWC2Q2TAL6 325 aa14.01□□□□□ -0.17
SCARB2-223ENST00000640640 THAP8Q8NA92 274 aa14.01□□□□□ -0.17
SCARB2-223ENST00000640640 MRAP2Q96G30 205 aa14.01□□□□□ -0.17
SCARB2-223ENST00000640640 DMRTC2Q8IXT2 367 aaPredicted RBP14□□□□□ -0.17
SCARB2-223ENST00000640640 FAM231BA6NCW3 169 aa14□□□□□ -0.17
SCARB2-223ENST00000640640 Q0VG73 95 aa14□□□□□ -0.17
SCARB2-223ENST00000640640 TMEM75Q8N9X5 138 aa14□□□□□ -0.17
SCARB2-223ENST00000640640 LSM4Q9Y4Z0 139 aaKnown RBP14□□□□□ -0.17
SCARB2-223ENST00000640640 FXYD7P58549 80 aa14□□□□□ -0.17
SCARB2-223ENST00000640640 CT83Q5H943 113 aa14□□□□□ -0.17
SCARB2-223ENST00000640640 MRPL16Q9NX20 251 aaKnown RBP14□□□□□ -0.17
SCARB2-223ENST00000640640 V9GYV3 84 aa14□□□□□ -0.17
SCARB2-223ENST00000640640 MUC22E2RYF6 1773 aaPredicted RBP14□□□□□ -0.17
SCARB2-223ENST00000640640 LAGE3Q14657 143 aa14□□□□□ -0.17
SCARB2-223ENST00000640640 COPS9Q8WXC6 57 aa14□□□□□ -0.17
SCARB2-223ENST00000640640 RNF182Q8N6D2 247 aa13.99□□□□□ -0.17
SCARB2-223ENST00000640640 BEX4Q9NWD9 120 aaPredicted RBP13.99□□□□□ -0.17
SCARB2-223ENST00000640640 C10orf142B7Z368 130 aa13.99□□□□□ -0.17
SCARB2-223ENST00000640640 APOMO95445 188 aa13.99□□□□□ -0.17
SCARB2-223ENST00000640640 MSMPQ1L6U9 139 aa13.99□□□□□ -0.17
SCARB2-223ENST00000640640 TMEM249Q2WGJ8 235 aa13.99□□□□□ -0.17
SCARB2-223ENST00000640640 PLA2G2EQ9NZK7 142 aa13.99□□□□□ -0.17
SCARB2-223ENST00000640640 CEP295Q9C0D2 2601 aa13.99□□□□□ -0.17
SCARB2-223ENST00000640640 IGKCP01834 107 aa13.99□□□□□ -0.17
SCARB2-223ENST00000640640 SYNJ2BPP57105 145 aa13.99□□□□□ -0.17
SCARB2-223ENST00000640640 COTL1Q14019 142 aa13.99□□□□□ -0.17
SCARB2-223ENST00000640640 DMRTA1Q5VZB9 504 aa13.99□□□□□ -0.17
SCARB2-223ENST00000640640 FAM231DQ6ZW35 169 aa13.99□□□□□ -0.17
SCARB2-223ENST00000640640 C14orf178Q8N769 122 aaPredicted RBP13.99□□□□□ -0.17
SCARB2-223ENST00000640640 DPH3P1Q9H4G8 78 aa13.99□□□□□ -0.17
SCARB2-223ENST00000640640 MYO9AB2RTY4 2548 aa13.98□□□□□ -0.17
SCARB2-223ENST00000640640 C1orf122Q6ZSJ8 110 aa13.98□□□□□ -0.17
SCARB2-223ENST00000640640 FXYD5Q96DB9 178 aa13.98□□□□□ -0.17
SCARB2-223ENST00000640640 C18orf32Q8TCD1 76 aa13.98□□□□□ -0.17
SCARB2-223ENST00000640640 MS4A6AQ9H2W1 248 aa13.98□□□□□ -0.17
SCARB2-223ENST00000640640 TMEM14CQ9P0S9 112 aa13.98□□□□□ -0.17
SCARB2-223ENST00000640640 SMKR1H3BMG3 65 aa13.98□□□□□ -0.17
SCARB2-223ENST00000640640 ZNF664Q8N3J9 261 aa13.98□□□□□ -0.17
SCARB2-223ENST00000640640 NAV2Q8IVL1 2488 aa13.97□□□□□ -0.17
SCARB2-223ENST00000640640 H3BRM9 83 aa13.97□□□□□ -0.17
SCARB2-223ENST00000640640 H3BRN7 92 aa13.97□□□□□ -0.17
SCARB2-223ENST00000640640 SYS1-DBNDD2H3BUS1 97 aa13.97□□□□□ -0.17
SCARB2-223ENST00000640640 LINC01559Q495D7 138 aa13.97□□□□□ -0.17
SCARB2-223ENST00000640640 LCNL1Q6ZST4 164 aa13.97□□□□□ -0.17
SCARB2-223ENST00000640640 KLHL30-AS1Q8NEE0 82 aa13.97□□□□□ -0.17
SCARB2-223ENST00000640640 CHTOPQ9Y3Y2 248 aaKnown RBP13.97□□□□□ -0.17
SCARB2-223ENST00000640640 SSBP2P81877 361 aaPredicted RBP13.96□□□□□ -0.17
SCARB2-223ENST00000640640 SMPXQ9UHP9 88 aa13.96□□□□□ -0.17
SCARB2-223ENST00000640640 IGHV2-5P01817 119 aa13.96□□□□□ -0.17
SCARB2-223ENST00000640640 ZNF491Q8N8L2 437 aa13.96□□□□□ -0.17
SCARB2-223ENST00000640640 LINC01549A6NIU2 74 aa13.96□□□□□ -0.18
SCARB2-223ENST00000640640 NHP2Q9NX24 153 aaKnown RBP13.96□□□□□ -0.18
SCARB2-223ENST00000640640 NSUN5P1Q3KNT7 163 aa13.95□□□□□ -0.18
SCARB2-223ENST00000640640 IL17RELQ6ZVW7 336 aa13.95□□□□□ -0.18
SCARB2-223ENST00000640640 ARHGAP21Q5T5U3 1957 aa13.95□□□□□ -0.18
SCARB2-223ENST00000640640 TMEM213A2RRL7 107 aa13.95□□□□□ -0.18
SCARB2-223ENST00000640640 SAP30O75446 220 aa13.95□□□□□ -0.18
SCARB2-223ENST00000640640 C8orf49Q96NF6 230 aa13.95□□□□□ -0.18
SCARB2-223ENST00000640640 hDV102S1A0JD36 115 aa13.95□□□□□ -0.18
SCARB2-223ENST00000640640 H3BUT2 72 aa13.95□□□□□ -0.18
SCARB2-223ENST00000640640 PRR25Q96S07 402 aa13.95□□□□□ -0.18
SCARB2-223ENST00000640640 TOMM7Q9P0U1 55 aa13.95□□□□□ -0.18
SCARB2-223ENST00000640640 ALKBH7Q9BT30 221 aaPredicted RBP13.95□□□□□ -0.18
SCARB2-223ENST00000640640 SPCS1Q9Y6A9 102 aa13.95□□□□□ -0.18
SCARB2-223ENST00000640640 C5orf30Q96GV9 206 aa13.94□□□□□ -0.18
SCARB2-223ENST00000640640 IGLV2-14P01704 120 aa13.94□□□□□ -0.18
SCARB2-223ENST00000640640 Q5PR19 223 aa13.94□□□□□ -0.18
SCARB2-223ENST00000640640 A8MWP6 167 aa13.94□□□□□ -0.18
SCARB2-223ENST00000640640 TDGF1P3P51864 188 aa13.94□□□□□ -0.18
SCARB2-223ENST00000640640 ZNF876PQ49A33 203 aa13.94□□□□□ -0.18
SCARB2-223ENST00000640640 OR11H6Q8NGC7 330 aa13.94□□□□□ -0.18
SCARB2-223ENST00000640640 RCHY1Q96PM5 261 aa13.94□□□□□ -0.18
SCARB2-223ENST00000640640 CD300EQ496F6 205 aaPredicted RBP13.93□□□□□ -0.18
SCARB2-223ENST00000640640 DEFB104AQ8WTQ1 72 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms