RNA–Protein interactions for RNA: ENST00000638629.1

PAX6-235, Transcript of paired box 6, humanhuman

TSL 2 BASIC

Gene PAX6, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-235ENST00000638629 LINC01356Q8N9X3 169 aa8.24□□□□□ -1.09
PAX6-235ENST00000638629 TMEM191AQ9H0A3 160 aa8.24□□□□□ -1.09
PAX6-235ENST00000638629 ANKRD17O75179 2603 aaKnown RBP8.23□□□□□ -1.09
PAX6-235ENST00000638629 TRAV40A0A0B4J280 105 aa8.23□□□□□ -1.09
PAX6-235ENST00000638629 NCBP2LA6PVI3 153 aaKnown RBP8.23□□□□□ -1.09
PAX6-235ENST00000638629 TEX22C9J3V5 150 aa8.23□□□□□ -1.09
PAX6-235ENST00000638629 TCF21O43680 179 aa8.23□□□□□ -1.09
PAX6-235ENST00000638629 CNIH1O95406 144 aa8.23□□□□□ -1.09
PAX6-235ENST00000638629 IGLC1P0CG04 106 aa8.23□□□□□ -1.09
PAX6-235ENST00000638629 FAM106CPP0CH98 169 aa8.23□□□□□ -1.09
PAX6-235ENST00000638629 HINT1P49773 126 aaPredicted RBP8.23□□□□□ -1.09
PAX6-235ENST00000638629 LYPD1Q8N2G4 141 aa8.23□□□□□ -1.09
PAX6-235ENST00000638629 TMEM75Q8N9X5 138 aa8.23□□□□□ -1.09
PAX6-235ENST00000638629 SRSF12Q8WXF0 261 aaKnown RBP8.23□□□□□ -1.09
PAX6-235ENST00000638629 MS4A6AQ9H2W1 248 aa8.23□□□□□ -1.09
PAX6-235ENST00000638629 RNF223E7ERA6 249 aa8.23□□□□□ -1.09
PAX6-235ENST00000638629 APELAP0DMC3 54 aa8.23□□□□□ -1.09
PAX6-235ENST00000638629 LOXL1Q08397 574 aaPredicted RBP8.23□□□□□ -1.09
PAX6-235ENST00000638629 Q5PR19 223 aa8.23□□□□□ -1.09
PAX6-235ENST00000638629 Q6AWC8 147 aa8.23□□□□□ -1.09
PAX6-235ENST00000638629 MAPK1IP1LQ8NDC0 245 aa8.23□□□□□ -1.09
PAX6-235ENST00000638629 PGLYRP4Q96LB8 373 aa8.23□□□□□ -1.09
PAX6-235ENST00000638629 HSPB8Q9UJY1 196 aa8.23□□□□□ -1.09
PAX6-235ENST00000638629 ASH1LQ9NR48 2969 aaKnown RBP8.23□□□□□ -1.09
PAX6-235ENST00000638629 POLQO75417 2590 aa8.23□□□□□ -1.09
PAX6-235ENST00000638629 NAV3Q8IVL0 2385 aa8.23□□□□□ -1.09
PAX6-235ENST00000638629 K7EP13 123 aa8.22□□□□□ -1.09
PAX6-235ENST00000638629 CHEK1O14757 476 aa8.22□□□□□ -1.09
PAX6-235ENST00000638629 IGHV4-38-2P0DP08 117 aa8.22□□□□□ -1.09
PAX6-235ENST00000638629 RPS20P60866 119 aaKnown RBP8.22□□□□□ -1.09
PAX6-235ENST00000638629 BRD3OSQ6XYD6 125 aa8.22□□□□□ -1.09
PAX6-235ENST00000638629 SLC25A39Q9BZJ4 359 aaPredicted RBP8.22□□□□□ -1.09
PAX6-235ENST00000638629 CLEC5AQ9NY25 188 aa8.22□□□□□ -1.09
PAX6-235ENST00000638629 TENM4Q6N022 2769 aa8.22□□□□□ -1.09
PAX6-235ENST00000638629 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.22□□□□□ -1.09
PAX6-235ENST00000638629 I3L2K1 104 aa8.22□□□□□ -1.09
PAX6-235ENST00000638629 CCL25O15444 150 aa8.22□□□□□ -1.09
PAX6-235ENST00000638629 GATA3P23771 443 aa8.22□□□□□ -1.09
PAX6-235ENST00000638629 PTTG1IPP53801 180 aa8.22□□□□□ -1.09
PAX6-235ENST00000638629 LEMD1Q68G75 181 aa8.22□□□□□ -1.09
PAX6-235ENST00000638629 PSG1P11464 419 aa8.21□□□□□ -1.09
PAX6-235ENST00000638629 MAP1LC3CQ9BXW4 147 aa8.21□□□□□ -1.09
PAX6-235ENST00000638629 RPH3ALQ9UNE2 315 aa8.21□□□□□ -1.09
PAX6-235ENST00000638629 CENPEQ02224 2701 aa8.21□□□□□ -1.1
PAX6-235ENST00000638629 AVPP01185 164 aa8.21□□□□□ -1.1
PAX6-235ENST00000638629 RIGQ13278 110 aa8.21□□□□□ -1.1
PAX6-235ENST00000638629 UNQ5815/PRO19632Q6UWF5 114 aa8.21□□□□□ -1.1
PAX6-235ENST00000638629 SGK494Q96LW2 274 aa8.21□□□□□ -1.1
PAX6-235ENST00000638629 CELSR2Q9HCU4 2923 aa8.21□□□□□ -1.1
PAX6-235ENST00000638629 A0A1B0GUT8 65 aa8.21□□□□□ -1.1
PAX6-235ENST00000638629 HSBP1L1C9JCN9 74 aa8.21□□□□□ -1.1
PAX6-235ENST00000638629 SLC25A34Q6PIV7 304 aa8.21□□□□□ -1.1
PAX6-235ENST00000638629 ZNF562Q6V9R5 426 aa8.21□□□□□ -1.1
PAX6-235ENST00000638629 SHANK2-AS3Q9BTD1 123 aa8.21□□□□□ -1.1
PAX6-235ENST00000638629 MEGF9Q9H1U4 602 aa8.21□□□□□ -1.1
PAX6-235ENST00000638629 SCRT2Q9NQ03 307 aa8.21□□□□□ -1.1
PAX6-235ENST00000638629 ABCA12Q86UK0 2595 aa8.2□□□□□ -1.1
PAX6-235ENST00000638629 TRBV19A0A075B6N1 114 aa8.2□□□□□ -1.1
PAX6-235ENST00000638629 H3BRN7 92 aa8.2□□□□□ -1.1
PAX6-235ENST00000638629 K7EQM0 130 aa8.2□□□□□ -1.1
PAX6-235ENST00000638629 TGFAP01135 160 aa8.2□□□□□ -1.1
PAX6-235ENST00000638629 KLF17Q5JT82 389 aaPredicted RBP8.2□□□□□ -1.1
PAX6-235ENST00000638629 LINC01545Q5VT33 79 aa8.2□□□□□ -1.1
PAX6-235ENST00000638629 PRSS57Q6UWY2 283 aa8.2□□□□□ -1.1
PAX6-235ENST00000638629 C12orf54Q6X4T0 127 aa8.2□□□□□ -1.1
PAX6-235ENST00000638629 Q8N9W7 124 aa8.2□□□□□ -1.1
PAX6-235ENST00000638629 DPF1Q92782 380 aa8.2□□□□□ -1.1
PAX6-235ENST00000638629 Q96MF0 132 aa8.2□□□□□ -1.1
PAX6-235ENST00000638629 RASL11BQ9BPW5 248 aa8.2□□□□□ -1.1
PAX6-235ENST00000638629 TRAV30A0A087WSZ9 112 aa8.2□□□□□ -1.1
PAX6-235ENST00000638629 SH2D7A6NKC9 451 aaPredicted RBP8.2□□□□□ -1.1
PAX6-235ENST00000638629 LYZP61626 148 aa8.2□□□□□ -1.1
PAX6-235ENST00000638629 RHOGP84095 191 aa8.2□□□□□ -1.1
PAX6-235ENST00000638629 ZNF493Q6ZR52 646 aa8.2□□□□□ -1.1
PAX6-235ENST00000638629 KRTAP1-3Q8IUG1 177 aa8.2□□□□□ -1.1
PAX6-235ENST00000638629 PMCHL2Q9BQD1 86 aa8.2□□□□□ -1.1
PAX6-235ENST00000638629 IGHV4-31P0DP07 118 aa8.19□□□□□ -1.1
PAX6-235ENST00000638629 S100A7AQ86SG5 101 aa8.19□□□□□ -1.1
PAX6-235ENST00000638629 BPIFA4PQ86YQ2 179 aa8.19□□□□□ -1.1
PAX6-235ENST00000638629 CIARTQ8N365 385 aaPredicted RBP8.19□□□□□ -1.1
PAX6-235ENST00000638629 NAV2Q8IVL1 2488 aa8.19□□□□□ -1.1
PAX6-235ENST00000638629 VPS13CQ709C8 3753 aa8.19□□□□□ -1.1
PAX6-235ENST00000638629 SERTM2A0A1B0GWG4 89 aa8.19□□□□□ -1.1
PAX6-235ENST00000638629 ZNF785A8K8V0 405 aa8.19□□□□□ -1.1
PAX6-235ENST00000638629 J3QLI3 93 aa8.19□□□□□ -1.1
PAX6-235ENST00000638629 SIGLEC15Q6ZMC9 328 aa8.19□□□□□ -1.1
PAX6-235ENST00000638629 GOLT1AQ6ZVE7 132 aa8.19□□□□□ -1.1
PAX6-235ENST00000638629 ARPC1AQ92747 370 aa8.19□□□□□ -1.1
PAX6-235ENST00000638629 MRPS12O15235 138 aaKnown RBP8.18□□□□□ -1.1
PAX6-235ENST00000638629 IGKV1-17P01599 117 aa8.18□□□□□ -1.1
PAX6-235ENST00000638629 PDE6HQ13956 83 aa8.18□□□□□ -1.1
PAX6-235ENST00000638629 PSG3Q16557 428 aa8.18□□□□□ -1.1
PAX6-235ENST00000638629 BVES-AS1Q5T3Y7 98 aa8.18□□□□□ -1.1
PAX6-235ENST00000638629 LINC00173Q6ZV60 143 aa8.18□□□□□ -1.1
PAX6-235ENST00000638629 COX8CQ7Z4L0 72 aa8.18□□□□□ -1.1
PAX6-235ENST00000638629 PRNTQ86SH4 94 aa8.18□□□□□ -1.1
PAX6-235ENST00000638629 DEFB125Q8N687 156 aa8.18□□□□□ -1.1
PAX6-235ENST00000638629 PIFOQ8TCI5 191 aa8.18□□□□□ -1.1
PAX6-235ENST00000638629 GSX1Q9H4S2 264 aaPredicted RBP8.18□□□□□ -1.1
PAX6-235ENST00000638629 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms