RNA–Protein interactions for RNA: ENST00000637367.1

SCN2A-216, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 4,408 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-216ENST00000637367 ETDBQ3ZM63 59 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 OCIAD2Q56VL3 154 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 RASL11AQ6T310 242 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 IGFBPL1Q8WX77 278 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 C8orf49Q96NF6 230 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 CCL19Q99731 98 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 FGF23Q9GZV9 251 aaPredicted RBP5.24□□□□□ -1.57
SCN2A-216ENST00000637367 PGPEP1Q9NXJ5 209 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 FCN3O75636 299 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 LY6DQ14210 128 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 ZNF876PQ49A33 203 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 VMO1Q7Z5L0 202 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 DTX1Q86Y01 620 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 TEX29Q8N6K0 151 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 CHAC1Q9BUX1 264 aa5.24□□□□□ -1.57
SCN2A-216ENST00000637367 MRPS16Q9Y3D3 137 aaKnown RBP5.24□□□□□ -1.57
SCN2A-216ENST00000637367 USP9YO00507 2555 aaPredicted RBP5.23□□□□□ -1.57
SCN2A-216ENST00000637367 A0A0G2JNJ9 132 aa5.23□□□□□ -1.57
SCN2A-216ENST00000637367 K7EN84 100 aa5.23□□□□□ -1.57
SCN2A-216ENST00000637367 THBDP07204 575 aa5.23□□□□□ -1.57
SCN2A-216ENST00000637367 SIGLEC15Q6ZMC9 328 aa5.23□□□□□ -1.57
SCN2A-216ENST00000637367 ADAMTSL5Q6ZMM2 481 aa5.23□□□□□ -1.57
SCN2A-216ENST00000637367 LYPD6BQ8NI32 183 aa5.23□□□□□ -1.57
SCN2A-216ENST00000637367 NPFFR1Q9GZQ6 430 aa5.23□□□□□ -1.57
SCN2A-216ENST00000637367 Q9UFV3 132 aa5.23□□□□□ -1.57
SCN2A-216ENST00000637367 KLF2Q9Y5W3 355 aaPredicted RBP5.23□□□□□ -1.57
SCN2A-216ENST00000637367 TANC2Q9HCD6 1990 aa5.23□□□□□ -1.57
SCN2A-216ENST00000637367 TRGV2A0A075B6R0 118 aa5.23□□□□□ -1.57
SCN2A-216ENST00000637367 BUB1B-PAK6H3BSN5 160 aa5.23□□□□□ -1.57
SCN2A-216ENST00000637367 HTN3P15516 51 aa5.23□□□□□ -1.57
SCN2A-216ENST00000637367 LMO1P25800 156 aa5.23□□□□□ -1.57
SCN2A-216ENST00000637367 TMEM75Q8N9X5 138 aa5.23□□□□□ -1.57
SCN2A-216ENST00000637367 PLXNA2O75051 1894 aa5.23□□□□□ -1.57
SCN2A-216ENST00000637367 LY6G6EA0A0G2JKS1 128 aa5.23□□□□□ -1.57
SCN2A-216ENST00000637367 IGLV3-1P01715 115 aa5.23□□□□□ -1.57
SCN2A-216ENST00000637367 FRMD6-AS1P0C7T7 363 aa5.23□□□□□ -1.57
SCN2A-216ENST00000637367 U3KQA8 63 aa5.23□□□□□ -1.57
SCN2A-216ENST00000637367 JMJD1CQ15652 2540 aa5.22□□□□□ -1.57
SCN2A-216ENST00000637367 IGHV1-24A0A0C4DH33 117 aa5.22□□□□□ -1.57
SCN2A-216ENST00000637367 TNFRSF6BO95407 300 aa5.22□□□□□ -1.57
SCN2A-216ENST00000637367 TDGF1P13385 188 aa5.22□□□□□ -1.57
SCN2A-216ENST00000637367 SSBP2P81877 361 aaPredicted RBP5.22□□□□□ -1.57
SCN2A-216ENST00000637367 ERG28Q9UKR5 140 aa5.22□□□□□ -1.57
SCN2A-216ENST00000637367 TICRRQ7Z2Z1 1910 aa5.22□□□□□ -1.57
SCN2A-216ENST00000637367 TRAV41A0A0B4J266 112 aa5.22□□□□□ -1.57
SCN2A-216ENST00000637367 COX6B1P14854 86 aa5.22□□□□□ -1.57
SCN2A-216ENST00000637367 PLNP26678 52 aa5.22□□□□□ -1.57
SCN2A-216ENST00000637367 C17orf58Q2M2W7 97 aa5.22□□□□□ -1.57
SCN2A-216ENST00000637367 LYPD6Q86Y78 171 aa5.22□□□□□ -1.57
SCN2A-216ENST00000637367 CSTL1Q9H114 145 aa5.22□□□□□ -1.57
SCN2A-216ENST00000637367 NDUFA4L2Q9NRX3 87 aa5.22□□□□□ -1.57
SCN2A-216ENST00000637367 TRAV26-2A0A0B4J265 109 aa5.22□□□□□ -1.57
SCN2A-216ENST00000637367 SPRY2O43597 315 aa5.22□□□□□ -1.57
SCN2A-216ENST00000637367 PRR30Q53SZ7 412 aaPredicted RBP5.22□□□□□ -1.57
SCN2A-216ENST00000637367 TNFRSF14Q92956 283 aa5.22□□□□□ -1.57
SCN2A-216ENST00000637367 ZNF625Q96I27 306 aaPredicted RBP5.22□□□□□ -1.57
SCN2A-216ENST00000637367 SLC25A2Q9BXI2 301 aa5.22□□□□□ -1.57
SCN2A-216ENST00000637367 TMEM155Q4W5P6 130 aa5.22□□□□□ -1.57
SCN2A-216ENST00000637367 AMTNQ6UX39 209 aa5.22□□□□□ -1.57
SCN2A-216ENST00000637367 G3V318 75 aa5.21□□□□□ -1.58
SCN2A-216ENST00000637367 H3BRM9 83 aa5.21□□□□□ -1.58
SCN2A-216ENST00000637367 C15orf65H3BRN8 121 aa5.21□□□□□ -1.58
SCN2A-216ENST00000637367 H3BUX3 64 aa5.21□□□□□ -1.58
SCN2A-216ENST00000637367 NDUFB8O95169 186 aa5.21□□□□□ -1.58
SCN2A-216ENST00000637367 ESDP10768 282 aa5.21□□□□□ -1.58
SCN2A-216ENST00000637367 PAX1P15863 534 aa5.21□□□□□ -1.58
SCN2A-216ENST00000637367 C3orf36Q3SXR2 165 aa5.21□□□□□ -1.58
SCN2A-216ENST00000637367 NEGR1Q7Z3B1 354 aa5.21□□□□□ -1.58
SCN2A-216ENST00000637367 C17orf77Q96MU5 243 aa5.21□□□□□ -1.58
SCN2A-216ENST00000637367 SPOCK3Q9BQ16 436 aa5.21□□□□□ -1.58
SCN2A-216ENST00000637367 SHANK2-AS3Q9BTD1 123 aa5.21□□□□□ -1.58
SCN2A-216ENST00000637367 MBD3L4A6NDZ8 208 aaPredicted RBP5.21□□□□□ -1.58
SCN2A-216ENST00000637367 MBD3L3A6NE82 208 aaPredicted RBP5.21□□□□□ -1.58
SCN2A-216ENST00000637367 MBD3L5A6NJ08 208 aaPredicted RBP5.21□□□□□ -1.58
SCN2A-216ENST00000637367 KNCNA6PVL3 124 aa5.21□□□□□ -1.58
SCN2A-216ENST00000637367 K7ERJ3 54 aa5.21□□□□□ -1.58
SCN2A-216ENST00000637367 IGHV3-53P01767 116 aa5.21□□□□□ -1.58
SCN2A-216ENST00000637367 GAGE2BQ13066 116 aa5.21□□□□□ -1.58
SCN2A-216ENST00000637367 GAGE2EQ4V326 116 aa5.21□□□□□ -1.58
SCN2A-216ENST00000637367 LINC00173Q6ZV60 143 aa5.21□□□□□ -1.58
SCN2A-216ENST00000637367 MBD3L2Q8NHZ7 208 aaPredicted RBP5.21□□□□□ -1.58
SCN2A-216ENST00000637367 ZC2HC1AQ96GY0 325 aa5.21□□□□□ -1.58
SCN2A-216ENST00000637367 LINC00477Q96M19 166 aa5.21□□□□□ -1.58
SCN2A-216ENST00000637367 C11orf68Q9H3H3 251 aaKnown RBP5.21□□□□□ -1.58
SCN2A-216ENST00000637367 GAGE2DQ9UEU5 116 aa5.21□□□□□ -1.58
SCN2A-216ENST00000637367 E7EQL1 145 aa5.21□□□□□ -1.58
SCN2A-216ENST00000637367 TEX43Q6ZNM6 134 aa5.21□□□□□ -1.58
SCN2A-216ENST00000637367 TMEM101Q96IK0 257 aa5.21□□□□□ -1.58
SCN2A-216ENST00000637367 ZFYVE26Q68DK2 2539 aa5.21□□□□□ -1.58
SCN2A-216ENST00000637367 IGHG3P01860 377 aa5.2□□□□□ -1.58
SCN2A-216ENST00000637367 EFNA4P52798 201 aa5.2□□□□□ -1.58
SCN2A-216ENST00000637367 FAM104BQ5XKR9 115 aa5.2□□□□□ -1.58
SCN2A-216ENST00000637367 SMPXQ9UHP9 88 aa5.2□□□□□ -1.58
SCN2A-216ENST00000637367 C9JAW5 83 aa5.2□□□□□ -1.58
SCN2A-216ENST00000637367 OVOL3O00110 214 aa5.2□□□□□ -1.58
SCN2A-216ENST00000637367 NPYP01303 97 aa5.2□□□□□ -1.58
SCN2A-216ENST00000637367 HLA-DMBP28068 263 aa5.2□□□□□ -1.58
SCN2A-216ENST00000637367 MRPL51Q4U2R6 128 aaKnown RBP5.2□□□□□ -1.58
SCN2A-216ENST00000637367 MORN5Q5VZ52 161 aa5.2□□□□□ -1.58
SCN2A-216ENST00000637367 NUP37Q8NFH4 326 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms