RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 NDUFS7O75251 213 aa12.32□□□□□ -0.44
CACNA1A-235ENST00000637004 PAX8Q06710 450 aa12.32□□□□□ -0.44
CACNA1A-235ENST00000637004 BCL6BQ8N143 479 aaPredicted RBP12.32□□□□□ -0.44
CACNA1A-235ENST00000637004 RASL11BQ9BPW5 248 aa12.32□□□□□ -0.44
CACNA1A-235ENST00000637004 COL6A6A6NMZ7 2263 aa12.32□□□□□ -0.44
CACNA1A-235ENST00000637004 TRAV26-1A0A087WT03 109 aa12.31□□□□□ -0.44
CACNA1A-235ENST00000637004 SHISA9B4DS77 424 aa12.31□□□□□ -0.44
CACNA1A-235ENST00000637004 J3QR89 54 aa12.31□□□□□ -0.44
CACNA1A-235ENST00000637004 VGLL1Q99990 258 aa12.31□□□□□ -0.44
CACNA1A-235ENST00000637004 TMEM213A2RRL7 107 aa12.31□□□□□ -0.44
CACNA1A-235ENST00000637004 FBLL1A6NHQ2 334 aaKnown RBP12.31□□□□□ -0.44
CACNA1A-235ENST00000637004 MRPL51Q4U2R6 128 aaKnown RBP12.31□□□□□ -0.44
CACNA1A-235ENST00000637004 SIGLEC15Q6ZMC9 328 aa12.3□□□□□ -0.44
CACNA1A-235ENST00000637004 RITA1Q96K30 269 aa12.3□□□□□ -0.44
CACNA1A-235ENST00000637004 SHANK2-AS3Q9BTD1 123 aa12.3□□□□□ -0.44
CACNA1A-235ENST00000637004 CADP27708 2225 aa12.3□□□□□ -0.44
CACNA1A-235ENST00000637004 K7EM74 188 aa12.3□□□□□ -0.44
CACNA1A-235ENST00000637004 APELAP0DMC3 54 aa12.3□□□□□ -0.44
CACNA1A-235ENST00000637004 AZU1P20160 251 aa12.3□□□□□ -0.44
CACNA1A-235ENST00000637004 CKS2P33552 79 aa12.3□□□□□ -0.44
CACNA1A-235ENST00000637004 FXYD7P58549 80 aa12.3□□□□□ -0.44
CACNA1A-235ENST00000637004 TM4SF20Q53R12 229 aa12.3□□□□□ -0.44
CACNA1A-235ENST00000637004 RAI1Q7Z5J4 1906 aaPredicted RBP12.3□□□□□ -0.44
CACNA1A-235ENST00000637004 SVILO95425 2214 aa12.3□□□□□ -0.44
CACNA1A-235ENST00000637004 FCGR2BP31994 310 aaPredicted RBP12.29□□□□□ -0.44
CACNA1A-235ENST00000637004 DKK2Q9UBU2 259 aa12.29□□□□□ -0.44
CACNA1A-235ENST00000637004 VSTM5A8MXK1 200 aa12.29□□□□□ -0.44
CACNA1A-235ENST00000637004 RBP4P02753 201 aa12.29□□□□□ -0.44
CACNA1A-235ENST00000637004 ZNF479Q96JC4 524 aa12.29□□□□□ -0.44
CACNA1A-235ENST00000637004 TMEM133Q9H2Q1 129 aa12.29□□□□□ -0.44
CACNA1A-235ENST00000637004 THBDP07204 575 aa12.29□□□□□ -0.44
CACNA1A-235ENST00000637004 RAB9AP51151 201 aa12.29□□□□□ -0.44
CACNA1A-235ENST00000637004 FXYD2P54710 66 aa12.29□□□□□ -0.44
CACNA1A-235ENST00000637004 DEFB109BQ30KR1 87 aa12.29□□□□□ -0.44
CACNA1A-235ENST00000637004 CD300EQ496F6 205 aaPredicted RBP12.29□□□□□ -0.44
CACNA1A-235ENST00000637004 SHISA2Q6UWI4 295 aa12.29□□□□□ -0.44
CACNA1A-235ENST00000637004 ASCL2Q99929 193 aa12.29□□□□□ -0.44
CACNA1A-235ENST00000637004 GTSF1LQ9H1H1 148 aa12.29□□□□□ -0.44
CACNA1A-235ENST00000637004 ARFGEF3Q5TH69 2177 aa12.28□□□□□ -0.44
CACNA1A-235ENST00000637004 INTS1Q8N201 2190 aaKnown RBP12.28□□□□□ -0.44
CACNA1A-235ENST00000637004 C17orf77Q96MU5 243 aa12.28□□□□□ -0.44
CACNA1A-235ENST00000637004 CHAC1Q9BUX1 264 aa12.28□□□□□ -0.44
CACNA1A-235ENST00000637004 CFAP46Q8IYW2 2715 aa12.28□□□□□ -0.44
CACNA1A-235ENST00000637004 F8W1H4 67 aa12.28□□□□□ -0.44
CACNA1A-235ENST00000637004 IGHV3-72A0A0B4J1Y9 119 aa12.27□□□□□ -0.44
CACNA1A-235ENST00000637004 TRAV17A0A0B4J275 112 aa12.27□□□□□ -0.44
CACNA1A-235ENST00000637004 MBD3L4A6NDZ8 208 aaPredicted RBP12.27□□□□□ -0.44
CACNA1A-235ENST00000637004 MBD3L3A6NE82 208 aaPredicted RBP12.27□□□□□ -0.44
CACNA1A-235ENST00000637004 MBD3L5A6NJ08 208 aaPredicted RBP12.27□□□□□ -0.44
CACNA1A-235ENST00000637004 H3BRN7 92 aa12.27□□□□□ -0.44
CACNA1A-235ENST00000637004 NPYP01303 97 aa12.27□□□□□ -0.44
CACNA1A-235ENST00000637004 CCL8P80075 99 aa12.27□□□□□ -0.44
CACNA1A-235ENST00000637004 PLGLAQ15195 96 aa12.27□□□□□ -0.44
CACNA1A-235ENST00000637004 LINC01559Q495D7 138 aa12.27□□□□□ -0.44
CACNA1A-235ENST00000637004 MBD3L2Q8NHZ7 208 aaPredicted RBP12.27□□□□□ -0.44
CACNA1A-235ENST00000637004 SIGLEC9Q9Y336 463 aa12.27□□□□□ -0.44
CACNA1A-235ENST00000637004 TMSB15BA0A087X1C1 80 aa12.27□□□□□ -0.45
CACNA1A-235ENST00000637004 NDUFB3O43676 98 aa12.27□□□□□ -0.45
CACNA1A-235ENST00000637004 SMAGPQ0VAQ4 97 aa12.27□□□□□ -0.45
CACNA1A-235ENST00000637004 ZNF474Q6S9Z5 364 aaPredicted RBP12.27□□□□□ -0.45
CACNA1A-235ENST00000637004 C8orf49Q96NF6 230 aa12.27□□□□□ -0.45
CACNA1A-235ENST00000637004 WI2-2373I1.2A0A1W2PRP0 233 aa12.26□□□□□ -0.45
CACNA1A-235ENST00000637004 ZNF207O43670 478 aaKnown RBP12.26□□□□□ -0.45
CACNA1A-235ENST00000637004 IGKV1-17P01599 117 aa12.26□□□□□ -0.45
CACNA1A-235ENST00000637004 CRYGBP07316 175 aa12.26□□□□□ -0.45
CACNA1A-235ENST00000637004 CCL11P51671 97 aa12.26□□□□□ -0.45
CACNA1A-235ENST00000637004 MAP1LC3AQ9H492 121 aa12.26□□□□□ -0.45
CACNA1A-235ENST00000637004 AAMDCQ9H7C9 122 aa12.26□□□□□ -0.45
CACNA1A-235ENST00000637004 GAGE12HA6NDE8 117 aa12.26□□□□□ -0.45
CACNA1A-235ENST00000637004 I3L2K1 104 aa12.26□□□□□ -0.45
CACNA1A-235ENST00000637004 TM2D2Q9BX73 214 aa12.26□□□□□ -0.45
CACNA1A-235ENST00000637004 ZMAT4Q9H898 229 aa12.26□□□□□ -0.45
CACNA1A-235ENST00000637004 SH2D1AO60880 128 aa12.25□□□□□ -0.45
CACNA1A-235ENST00000637004 FOXI2Q6ZQN5 318 aa12.25□□□□□ -0.45
CACNA1A-235ENST00000637004 FDCSPQ8NFU4 85 aa12.25□□□□□ -0.45
CACNA1A-235ENST00000637004 PHLDA1Q8WV24 401 aaPredicted RBP12.25□□□□□ -0.45
CACNA1A-235ENST00000637004 TEX22C9J3V5 150 aa12.25□□□□□ -0.45
CACNA1A-235ENST00000637004 SRSF1Q07955 248 aaKnown RBP eCLIP12.25□□□□□ -0.45
CACNA1A-235ENST00000637004 PDE6HQ13956 83 aa12.25□□□□□ -0.45
CACNA1A-235ENST00000637004 TWIST1Q15672 202 aa12.25□□□□□ -0.45
CACNA1A-235ENST00000637004 SEM1Q6ZVN7 128 aa12.25□□□□□ -0.45
CACNA1A-235ENST00000637004 PPP1R27Q86WC6 154 aa12.25□□□□□ -0.45
CACNA1A-235ENST00000637004 WFDC3Q8IUB2 231 aa12.25□□□□□ -0.45
CACNA1A-235ENST00000637004 C18orf15Q96N68 181 aa12.25□□□□□ -0.45
CACNA1A-235ENST00000637004 RALYQ9UKM9 306 aaKnown RBP12.25□□□□□ -0.45
CACNA1A-235ENST00000637004 HHLA3Q9XRX5 114 aa12.25□□□□□ -0.45
CACNA1A-235ENST00000637004 PLXNB1O43157 2135 aa12.25□□□□□ -0.45
CACNA1A-235ENST00000637004 M0R3E3 92 aa12.24□□□□□ -0.45
CACNA1A-235ENST00000637004 ODF1Q14990 250 aa12.24□□□□□ -0.45
CACNA1A-235ENST00000637004 C5orf64Q2M2E5 130 aa12.24□□□□□ -0.45
CACNA1A-235ENST00000637004 IGF2-ASQ6U949 168 aa12.24□□□□□ -0.45
CACNA1A-235ENST00000637004 NHP2Q9NX24 153 aaKnown RBP12.24□□□□□ -0.45
CACNA1A-235ENST00000637004 TSSC4Q9Y5U2 329 aaPredicted RBP12.24□□□□□ -0.45
CACNA1A-235ENST00000637004 IGKV2D-26A0A0A0MRZ7 120 aa12.24□□□□□ -0.45
CACNA1A-235ENST00000637004 E9PLD3 99 aa12.24□□□□□ -0.45
CACNA1A-235ENST00000637004 SMKR1H3BMG3 65 aa12.24□□□□□ -0.45
CACNA1A-235ENST00000637004 K7ERJ3 54 aa12.24□□□□□ -0.45
CACNA1A-235ENST00000637004 IGKCP01834 107 aa12.24□□□□□ -0.45
CACNA1A-235ENST00000637004 PRSS1P07477 247 aa12.24□□□□□ -0.45
CACNA1A-235ENST00000637004 EVI2AP22794 236 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms