RNA–Protein interactions for RNA: ENST00000636709.1

CHRNA7-219, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

Gene CHRNA7, Length 7,722 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-219ENST00000636709 IGHV3-33P01772 117 aa7.17□□□□□ -1.26
CHRNA7-219ENST00000636709 IGHV3-30-3P0DP02 117 aa7.17□□□□□ -1.26
CHRNA7-219ENST00000636709 IGHV3-30-5P0DP03 117 aa7.17□□□□□ -1.26
CHRNA7-219ENST00000636709 ZFP36P26651 326 aaKnown RBP7.17□□□□□ -1.26
CHRNA7-219ENST00000636709 GAS1P54826 345 aa7.17□□□□□ -1.26
CHRNA7-219ENST00000636709 TBX6O95947 436 aaPredicted RBP7.17□□□□□ -1.26
CHRNA7-219ENST00000636709 SRP19P09132 144 aaKnown RBP7.17□□□□□ -1.26
CHRNA7-219ENST00000636709 MEGF9Q9H1U4 602 aa7.17□□□□□ -1.26
CHRNA7-219ENST00000636709 LIME1Q9H400 295 aa7.17□□□□□ -1.26
CHRNA7-219ENST00000636709 C5orf63A6NC05 138 aa7.17□□□□□ -1.26
CHRNA7-219ENST00000636709 XCL1P47992 114 aa7.17□□□□□ -1.26
CHRNA7-219ENST00000636709 DUX4L9Q6RFH8 374 aaPredicted RBP7.17□□□□□ -1.26
CHRNA7-219ENST00000636709 LINC00114Q6XXX2 140 aa7.17□□□□□ -1.26
CHRNA7-219ENST00000636709 APRG1Q8IVJ8 170 aa7.17□□□□□ -1.26
CHRNA7-219ENST00000636709 TRGV9Q99603 122 aa7.17□□□□□ -1.26
CHRNA7-219ENST00000636709 IGLV3-32A0A0A0MS00 114 aa7.17□□□□□ -1.26
CHRNA7-219ENST00000636709 LINC00473A8K010 186 aa7.17□□□□□ -1.26
CHRNA7-219ENST00000636709 PPBPP02775 128 aa7.17□□□□□ -1.26
CHRNA7-219ENST00000636709 FAM90A2PQ658T7 463 aa7.17□□□□□ -1.26
CHRNA7-219ENST00000636709 DEFB4AO15263 64 aa7.16□□□□□ -1.26
CHRNA7-219ENST00000636709 IGFBP3P17936 291 aaPredicted RBP7.16□□□□□ -1.26
CHRNA7-219ENST00000636709 IFITM3Q01628 133 aa7.16□□□□□ -1.26
CHRNA7-219ENST00000636709 J3QLI3 93 aa7.16□□□□□ -1.26
CHRNA7-219ENST00000636709 PIFOQ8TCI5 191 aa7.16□□□□□ -1.26
CHRNA7-219ENST00000636709 TMEM158Q8WZ71 300 aa7.16□□□□□ -1.26
CHRNA7-219ENST00000636709 MYMXA0A1B0GTQ4 84 aa7.16□□□□□ -1.26
CHRNA7-219ENST00000636709 CD5LO43866 347 aa7.16□□□□□ -1.26
CHRNA7-219ENST00000636709 LRCOL1A6NCL2 159 aa7.16□□□□□ -1.26
CHRNA7-219ENST00000636709 NDUFB8O95169 186 aa7.16□□□□□ -1.26
CHRNA7-219ENST00000636709 SPOCK3Q9BQ16 436 aa7.16□□□□□ -1.26
CHRNA7-219ENST00000636709 TMEM243Q9BU79 118 aa7.16□□□□□ -1.26
CHRNA7-219ENST00000636709 SCRT2Q9NQ03 307 aa7.16□□□□□ -1.26
CHRNA7-219ENST00000636709 PCNX1Q96RV3 2341 aa7.16□□□□□ -1.26
CHRNA7-219ENST00000636709 KIAA1671Q9BY89 1806 aa7.16□□□□□ -1.26
CHRNA7-219ENST00000636709 ARMS2P0C7Q2 107 aa7.16□□□□□ -1.26
CHRNA7-219ENST00000636709 C9orf66Q5T8R8 295 aa7.16□□□□□ -1.26
CHRNA7-219ENST00000636709 TSKUQ8WUA8 353 aa7.16□□□□□ -1.26
CHRNA7-219ENST00000636709 PLEKHB2Q96CS7 222 aa7.16□□□□□ -1.26
CHRNA7-219ENST00000636709 TRAV26-2A0A0B4J265 109 aa7.15□□□□□ -1.26
CHRNA7-219ENST00000636709 LTBP1Q14766 1721 aa7.15□□□□□ -1.26
CHRNA7-219ENST00000636709 TMEM242Q9NWH2 141 aa7.15□□□□□ -1.26
CHRNA7-219ENST00000636709 CLDN16Q9Y5I7 305 aa7.15□□□□□ -1.26
CHRNA7-219ENST00000636709 SLURP1P55000 103 aa7.15□□□□□ -1.26
CHRNA7-219ENST00000636709 HGFACQ04756 655 aa7.15□□□□□ -1.26
CHRNA7-219ENST00000636709 SMIM2Q9BVW6 85 aa7.15□□□□□ -1.26
CHRNA7-219ENST00000636709 ZNF581Q9P0T4 197 aa7.15□□□□□ -1.26
CHRNA7-219ENST00000636709 MMP23AO75900 390 aa7.15□□□□□ -1.26
CHRNA7-219ENST00000636709 TRPT1Q86TN4 253 aaKnown RBP7.15□□□□□ -1.26
CHRNA7-219ENST00000636709 LINC00518Q8N0U6 118 aa7.15□□□□□ -1.26
CHRNA7-219ENST00000636709 SHISA3A0PJX4 238 aa7.15□□□□□ -1.26
CHRNA7-219ENST00000636709 CSRP3P50461 194 aa7.15□□□□□ -1.26
CHRNA7-219ENST00000636709 TEX36Q5VZQ5 186 aa7.15□□□□□ -1.26
CHRNA7-219ENST00000636709 NEGR1Q7Z3B1 354 aa7.15□□□□□ -1.26
CHRNA7-219ENST00000636709 A0A1W2PRE2 83 aa7.15□□□□□ -1.27
CHRNA7-219ENST00000636709 GP9P14770 177 aa7.15□□□□□ -1.27
CHRNA7-219ENST00000636709 SEC11AP67812 179 aa7.15□□□□□ -1.27
CHRNA7-219ENST00000636709 CD200R1LQ6Q8B3 271 aa7.15□□□□□ -1.27
CHRNA7-219ENST00000636709 KLHDC3Q9BQ90 382 aa7.15□□□□□ -1.27
CHRNA7-219ENST00000636709 PLCE1Q9P212 2302 aa7.15□□□□□ -1.27
CHRNA7-219ENST00000636709 CCL18P55774 89 aa7.15□□□□□ -1.27
CHRNA7-219ENST00000636709 TRAV12-1A0A0B4J245 112 aa7.14□□□□□ -1.27
CHRNA7-219ENST00000636709 KIF26AQ9ULI4 1882 aaPredicted RBP7.14□□□□□ -1.27
CHRNA7-219ENST00000636709 TNFRSF6BO95407 300 aa7.14□□□□□ -1.27
CHRNA7-219ENST00000636709 OCIAD2Q56VL3 154 aa7.14□□□□□ -1.27
CHRNA7-219ENST00000636709 C4orf48Q5BLP8 95 aa7.14□□□□□ -1.27
CHRNA7-219ENST00000636709 AMN1Q8IY45 258 aa7.14□□□□□ -1.27
CHRNA7-219ENST00000636709 VWA8A3KMH1 1905 aa7.14□□□□□ -1.27
CHRNA7-219ENST00000636709 IGLL5B9A064 214 aa7.14□□□□□ -1.27
CHRNA7-219ENST00000636709 C2orf82Q6UX34 121 aa7.14□□□□□ -1.27
CHRNA7-219ENST00000636709 IGLV10-54A0A075B6I4 117 aa7.14□□□□□ -1.27
CHRNA7-219ENST00000636709 A8MWV9 139 aa7.14□□□□□ -1.27
CHRNA7-219ENST00000636709 WFDC1Q9HC57 220 aa7.14□□□□□ -1.27
CHRNA7-219ENST00000636709 RNF5Q99942 180 aa7.14□□□□□ -1.27
CHRNA7-219ENST00000636709 PKDREJQ9NTG1 2253 aa7.13□□□□□ -1.27
CHRNA7-219ENST00000636709 TP53TG1Q9Y2A0 90 aa7.13□□□□□ -1.27
CHRNA7-219ENST00000636709 FAM90A9PA6NNJ1 464 aa7.13□□□□□ -1.27
CHRNA7-219ENST00000636709 TIRAPP58753 221 aa7.13□□□□□ -1.27
CHRNA7-219ENST00000636709 LY6G5BQ8NDX9 201 aa7.13□□□□□ -1.27
CHRNA7-219ENST00000636709 RFNGQ9Y644 331 aa7.13□□□□□ -1.27
CHRNA7-219ENST00000636709 NCOR1O75376 2440 aa7.13□□□□□ -1.27
CHRNA7-219ENST00000636709 BUB3O43684 328 aa7.13□□□□□ -1.27
CHRNA7-219ENST00000636709 IGHG3P01860 377 aa7.13□□□□□ -1.27
CHRNA7-219ENST00000636709 ZNF503Q96F45 646 aa7.13□□□□□ -1.27
CHRNA7-219ENST00000636709 AMBPP02760 352 aa7.13□□□□□ -1.27
CHRNA7-219ENST00000636709 PRB2P02812 416 aaPredicted RBP7.13□□□□□ -1.27
CHRNA7-219ENST00000636709 IGHV4-30-2A0A087WSY4 118 aa7.13□□□□□ -1.27
CHRNA7-219ENST00000636709 A0A1W2PPI3 338 aa7.13□□□□□ -1.27
CHRNA7-219ENST00000636709 HEATR5AQ86XA9 2040 aa7.13□□□□□ -1.27
CHRNA7-219ENST00000636709 NTF4P34130 210 aa7.13□□□□□ -1.27
CHRNA7-219ENST00000636709 CDKN1BP46527 198 aa7.13□□□□□ -1.27
CHRNA7-219ENST00000636709 SRSF3P84103 164 aaKnown RBP7.13□□□□□ -1.27
CHRNA7-219ENST00000636709 OSTCQ9NRP0 149 aa7.13□□□□□ -1.27
CHRNA7-219ENST00000636709 VPREB3Q9UKI3 123 aa7.13□□□□□ -1.27
CHRNA7-219ENST00000636709 KLK5Q9Y337 293 aaPredicted RBP7.13□□□□□ -1.27
CHRNA7-219ENST00000636709 NOTCH3Q9UM47 2321 aa7.12□□□□□ -1.27
CHRNA7-219ENST00000636709 IGHV1OR15-1A0A075B7D0 117 aa7.12□□□□□ -1.27
CHRNA7-219ENST00000636709 SAMD5Q5TGI4 173 aa7.12□□□□□ -1.27
CHRNA7-219ENST00000636709 ROS1P08922 2347 aa7.12□□□□□ -1.27
CHRNA7-219ENST00000636709 IGHV4-28A0A0C4DH34 117 aa7.12□□□□□ -1.27
CHRNA7-219ENST00000636709 I3L3M4 83 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms