RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 VCYO14598 125 aa13.04□□□□□ -0.32
CACNA1A-221ENST00000636012 SPATA31B1PQ5VZV4 182 aa13.04□□□□□ -0.32
CACNA1A-221ENST00000636012 LAMTOR2Q9Y2Q5 125 aa13.04□□□□□ -0.32
CACNA1A-221ENST00000636012 PSPNO60542 156 aa13.04□□□□□ -0.32
CACNA1A-221ENST00000636012 NTN3O00634 580 aaPredicted RBP13.04□□□□□ -0.32
CACNA1A-221ENST00000636012 HEPN1Q6WQI6 88 aa13.04□□□□□ -0.32
CACNA1A-221ENST00000636012 IGHG4P01861 327 aa13.04□□□□□ -0.32
CACNA1A-221ENST00000636012 DEFB131AP59861 70 aa13.04□□□□□ -0.32
CACNA1A-221ENST00000636012 XCL2Q9UBD3 114 aa13.04□□□□□ -0.32
CACNA1A-221ENST00000636012 MBD3L4A6NDZ8 208 aaPredicted RBP13.04□□□□□ -0.32
CACNA1A-221ENST00000636012 MBD3L3A6NE82 208 aaPredicted RBP13.04□□□□□ -0.32
CACNA1A-221ENST00000636012 MBD3L5A6NJ08 208 aaPredicted RBP13.04□□□□□ -0.32
CACNA1A-221ENST00000636012 RPL18AQ02543 176 aaKnown RBP13.04□□□□□ -0.32
CACNA1A-221ENST00000636012 MBD3L2Q8NHZ7 208 aaPredicted RBP13.04□□□□□ -0.32
CACNA1A-221ENST00000636012 ATP6V0BQ99437 205 aa13.04□□□□□ -0.32
CACNA1A-221ENST00000636012 VSIRQ9H7M9 311 aa13.04□□□□□ -0.32
CACNA1A-221ENST00000636012 TEX48A0A1B0GUV7 120 aa13.03□□□□□ -0.32
CACNA1A-221ENST00000636012 hDV102S1A0JD36 115 aa13.03□□□□□ -0.32
CACNA1A-221ENST00000636012 DKK1O94907 266 aa13.03□□□□□ -0.32
CACNA1A-221ENST00000636012 MPV17L2Q567V2 206 aa13.03□□□□□ -0.32
CACNA1A-221ENST00000636012 SMKR1H3BMG3 65 aa13.03□□□□□ -0.32
CACNA1A-221ENST00000636012 H0YJW9 148 aa13.03□□□□□ -0.32
CACNA1A-221ENST00000636012 TMEM170AQ8WVE7 144 aa13.03□□□□□ -0.32
CACNA1A-221ENST00000636012 RIF1Q5UIP0 2472 aaKnown RBP13.03□□□□□ -0.32
CACNA1A-221ENST00000636012 ZMAT4Q9H898 229 aa13.02□□□□□ -0.32
CACNA1A-221ENST00000636012 TEX22C9J3V5 150 aa13.02□□□□□ -0.32
CACNA1A-221ENST00000636012 IGLV2-23P01705 113 aa13.02□□□□□ -0.32
CACNA1A-221ENST00000636012 RHPN1-AS1Q9BWJ2 59 aa13.02□□□□□ -0.32
CACNA1A-221ENST00000636012 A0A1B0GWJ7 208 aa13.02□□□□□ -0.32
CACNA1A-221ENST00000636012 TMEM158Q8WZ71 300 aa13.02□□□□□ -0.32
CACNA1A-221ENST00000636012 TRGV9Q99603 122 aa13.02□□□□□ -0.33
CACNA1A-221ENST00000636012 KNCNA6PVL3 124 aa13.02□□□□□ -0.33
CACNA1A-221ENST00000636012 SRRM5B3KS81 715 aa13.02□□□□□ -0.33
CACNA1A-221ENST00000636012 LINC00205P59089 165 aa13.02□□□□□ -0.33
CACNA1A-221ENST00000636012 IFITM2Q01629 132 aa13.02□□□□□ -0.33
CACNA1A-221ENST00000636012 MPLKIPQ8TAP9 179 aa13.02□□□□□ -0.33
CACNA1A-221ENST00000636012 CEP192Q8TEP8 1941 aa13.02□□□□□ -0.33
CACNA1A-221ENST00000636012 C4orf48Q5BLP8 95 aa13.02□□□□□ -0.33
CACNA1A-221ENST00000636012 TREML4Q6UXN2 200 aa13.02□□□□□ -0.33
CACNA1A-221ENST00000636012 CHAC1Q9BUX1 264 aa13.01□□□□□ -0.33
CACNA1A-221ENST00000636012 PLEKHB2Q96CS7 222 aa13.01□□□□□ -0.33
CACNA1A-221ENST00000636012 WFDC1Q9HC57 220 aa13.01□□□□□ -0.33
CACNA1A-221ENST00000636012 SIGLEC9Q9Y336 463 aa13.01□□□□□ -0.33
CACNA1A-221ENST00000636012 RNF222A6NCQ9 220 aa13.01□□□□□ -0.33
CACNA1A-221ENST00000636012 BCL6BQ8N143 479 aaPredicted RBP13.01□□□□□ -0.33
CACNA1A-221ENST00000636012 NABP1Q96AH0 204 aa13.01□□□□□ -0.33
CACNA1A-221ENST00000636012 IL17RELQ6ZVW7 336 aa13.01□□□□□ -0.33
CACNA1A-221ENST00000636012 IGKV1D-8A0A087WSZ0 117 aa13.01□□□□□ -0.33
CACNA1A-221ENST00000636012 SLC25A16P16260 332 aa13.01□□□□□ -0.33
CACNA1A-221ENST00000636012 CARHSP1Q9Y2V2 147 aaKnown RBP13.01□□□□□ -0.33
CACNA1A-221ENST00000636012 BMPERQ8N8U9 685 aa13□□□□□ -0.33
CACNA1A-221ENST00000636012 SPINK13Q1W4C9 94 aa13□□□□□ -0.33
CACNA1A-221ENST00000636012 PRR30Q53SZ7 412 aaPredicted RBP13□□□□□ -0.33
CACNA1A-221ENST00000636012 MSMBP08118 114 aa13□□□□□ -0.33
CACNA1A-221ENST00000636012 IGHV4OR15-8A0A075B7B6 117 aa13□□□□□ -0.33
CACNA1A-221ENST00000636012 A0A087WW49 117 aa13□□□□□ -0.33
CACNA1A-221ENST00000636012 IGLV3-32A0A0A0MS00 114 aa13□□□□□ -0.33
CACNA1A-221ENST00000636012 IGHV3-38A0A0C4DH36 116 aa13□□□□□ -0.33
CACNA1A-221ENST00000636012 GAFA1Q96PS6 74 aa13□□□□□ -0.33
CACNA1A-221ENST00000636012 E7EQL1 145 aa12.99□□□□□ -0.33
CACNA1A-221ENST00000636012 IGKV1OR2-108A0A075B7D4 117 aa12.99□□□□□ -0.33
CACNA1A-221ENST00000636012 E9PQ18 207 aa12.99□□□□□ -0.33
CACNA1A-221ENST00000636012 INAFM2P0DMQ5 153 aa12.99□□□□□ -0.33
CACNA1A-221ENST00000636012 FAM90A2PQ658T7 463 aa12.99□□□□□ -0.33
CACNA1A-221ENST00000636012 OBSL1O75147 1896 aa12.99□□□□□ -0.33
CACNA1A-221ENST00000636012 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.99□□□□□ -0.33
CACNA1A-221ENST00000636012 CRLF1O75462 422 aa12.99□□□□□ -0.33
CACNA1A-221ENST00000636012 C5orf24Q7Z6I8 188 aa12.99□□□□□ -0.33
CACNA1A-221ENST00000636012 LAIR2Q6ISS4 152 aa12.99□□□□□ -0.33
CACNA1A-221ENST00000636012 SPTSSBQ8NFR3 76 aa12.98□□□□□ -0.33
CACNA1A-221ENST00000636012 TIMM21Q9BVV7 248 aa12.98□□□□□ -0.33
CACNA1A-221ENST00000636012 NUP35Q8NFH5 326 aa12.98□□□□□ -0.33
CACNA1A-221ENST00000636012 DAZ1Q9NQZ3 744 aaKnown RBP12.98□□□□□ -0.33
CACNA1A-221ENST00000636012 TET2Q6N021 2002 aaPredicted RBP12.98□□□□□ -0.33
CACNA1A-221ENST00000636012 IGKV1-12A0A0C4DH73 117 aa12.98□□□□□ -0.33
CACNA1A-221ENST00000636012 IGKV1D-12P01611 117 aa12.98□□□□□ -0.33
CACNA1A-221ENST00000636012 FLVCR1-AS1Q8TAF5 88 aa12.98□□□□□ -0.33
CACNA1A-221ENST00000636012 UBL5Q9BZL1 73 aa12.98□□□□□ -0.33
CACNA1A-221ENST00000636012 LINC01619G3V211 115 aa12.98□□□□□ -0.33
CACNA1A-221ENST00000636012 APOC4P55056 127 aa12.98□□□□□ -0.33
CACNA1A-221ENST00000636012 C9orf139Q6ZV77 190 aa12.98□□□□□ -0.33
CACNA1A-221ENST00000636012 IGKV1-27A0A075B6S5 117 aa12.98□□□□□ -0.33
CACNA1A-221ENST00000636012 AZU1P20160 251 aa12.98□□□□□ -0.33
CACNA1A-221ENST00000636012 KIAA1671Q9BY89 1806 aa12.98□□□□□ -0.33
CACNA1A-221ENST00000636012 OVOL3O00110 214 aa12.97□□□□□ -0.33
CACNA1A-221ENST00000636012 ATRAIDQ6UW56 229 aa12.97□□□□□ -0.33
CACNA1A-221ENST00000636012 KLK9Q9UKQ9 250 aa12.97□□□□□ -0.33
CACNA1A-221ENST00000636012 IGKV2D-24A0A075B6R9 120 aa12.97□□□□□ -0.33
CACNA1A-221ENST00000636012 ZNRD1Q9P1U0 126 aa12.97□□□□□ -0.33
CACNA1A-221ENST00000636012 SIP14410 1827 aa12.97□□□□□ -0.33
CACNA1A-221ENST00000636012 MYMXA0A1B0GTQ4 84 aa12.96□□□□□ -0.33
CACNA1A-221ENST00000636012 OOSP1A8MZH6 123 aa12.96□□□□□ -0.33
CACNA1A-221ENST00000636012 IGF2BP2-AS1Q96M15 143 aa12.96□□□□□ -0.33
CACNA1A-221ENST00000636012 LIME1Q9H400 295 aa12.96□□□□□ -0.33
CACNA1A-221ENST00000636012 LRCOL1A6NCL2 159 aa12.96□□□□□ -0.34
CACNA1A-221ENST00000636012 HSD52Q0P140 79 aa12.96□□□□□ -0.34
CACNA1A-221ENST00000636012 RNASE13Q5GAN3 156 aaKnown RBP12.96□□□□□ -0.34
CACNA1A-221ENST00000636012 AGMATQ9BSE5 352 aa12.96□□□□□ -0.34
CACNA1A-221ENST00000636012 LINC01549A6NIU2 74 aa12.95□□□□□ -0.34
CACNA1A-221ENST00000636012 SUPT4H1P63272 117 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms