RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 OR10J4P0C629 311 aa12.33□□□□□ -0.44
LIN28B-202ENST00000635857 NBEAP1P0C6P0 100 aa12.33□□□□□ -0.44
LIN28B-202ENST00000635857 TSPOP30536 169 aa12.33□□□□□ -0.44
LIN28B-202ENST00000635857 AMTNQ6UX39 209 aa12.33□□□□□ -0.44
LIN28B-202ENST00000635857 RNF141Q8WVD5 230 aa12.33□□□□□ -0.44
LIN28B-202ENST00000635857 RFNGQ9Y644 331 aa12.33□□□□□ -0.44
LIN28B-202ENST00000635857 JTBO76095 146 aa12.32□□□□□ -0.44
LIN28B-202ENST00000635857 MBP02144 154 aa12.32□□□□□ -0.44
LIN28B-202ENST00000635857 CDKN1BP46527 198 aa12.32□□□□□ -0.44
LIN28B-202ENST00000635857 RRN3P1Q2M238 152 aa12.32□□□□□ -0.44
LIN28B-202ENST00000635857 OR10G4Q8NGN3 311 aa12.32□□□□□ -0.44
LIN28B-202ENST00000635857 OR10G9Q8NGN4 311 aa12.32□□□□□ -0.44
LIN28B-202ENST00000635857 OR10G7Q8NGN6 311 aa12.32□□□□□ -0.44
LIN28B-202ENST00000635857 FAM167A-AS1Q96KT0 104 aa12.32□□□□□ -0.44
LIN28B-202ENST00000635857 PSMG3Q9BT73 122 aaPredicted RBP12.32□□□□□ -0.44
LIN28B-202ENST00000635857 ARPC5O15511 151 aa12.31□□□□□ -0.44
LIN28B-202ENST00000635857 RBMY1A1P0DJD3 496 aaKnown RBP12.31□□□□□ -0.44
LIN28B-202ENST00000635857 RBMY1CP0DJD4 496 aa12.31□□□□□ -0.44
LIN28B-202ENST00000635857 NANOS2P60321 138 aaKnown RBP12.31□□□□□ -0.44
LIN28B-202ENST00000635857 RBMY1FQ15415 496 aaKnown RBP12.31□□□□□ -0.44
LIN28B-202ENST00000635857 FAM122CQ6P4D5 195 aa12.31□□□□□ -0.44
LIN28B-202ENST00000635857 BAP18Q8IXM2 172 aa12.31□□□□□ -0.44
LIN28B-202ENST00000635857 OR2G3Q8NGZ4 309 aa12.31□□□□□ -0.44
LIN28B-202ENST00000635857 PHLDA1Q8WV24 401 aaPredicted RBP12.31□□□□□ -0.44
LIN28B-202ENST00000635857 GNPNAT1Q96EK6 184 aaPredicted RBP12.31□□□□□ -0.44
LIN28B-202ENST00000635857 TRAV12-2A0A075B6T6 113 aa12.3□□□□□ -0.44
LIN28B-202ENST00000635857 TEX48A0A1B0GUV7 120 aa12.3□□□□□ -0.44
LIN28B-202ENST00000635857 RNF222A6NCQ9 220 aa12.3□□□□□ -0.44
LIN28B-202ENST00000635857 TAAR5O14804 337 aa12.3□□□□□ -0.44
LIN28B-202ENST00000635857 PRB4P10163 310 aaPredicted RBP12.3□□□□□ -0.44
LIN28B-202ENST00000635857 ATP6V0CP27449 155 aa12.3□□□□□ -0.44
LIN28B-202ENST00000635857 LEPP41159 167 aa12.3□□□□□ -0.44
LIN28B-202ENST00000635857 CSN1S1P47710 185 aa12.3□□□□□ -0.44
LIN28B-202ENST00000635857 EMP1P54849 157 aa12.3□□□□□ -0.44
LIN28B-202ENST00000635857 RAB2AP61019 212 aa12.3□□□□□ -0.44
LIN28B-202ENST00000635857 SERF2P84101 59 aa12.3□□□□□ -0.44
LIN28B-202ENST00000635857 ICAM4Q14773 271 aa12.3□□□□□ -0.44
LIN28B-202ENST00000635857 CEMP1Q6PRD7 247 aaPredicted RBP12.3□□□□□ -0.44
LIN28B-202ENST00000635857 PQLC2Q6ZP29 291 aa12.3□□□□□ -0.44
LIN28B-202ENST00000635857 TMEM256Q8N2U0 113 aa12.3□□□□□ -0.44
LIN28B-202ENST00000635857 EXOC3-AS1Q8N2X6 119 aa12.3□□□□□ -0.44
LIN28B-202ENST00000635857 FXYD5Q96DB9 178 aa12.3□□□□□ -0.44
LIN28B-202ENST00000635857 C11orf94C9JXX5 98 aa12.29□□□□□ -0.44
LIN28B-202ENST00000635857 PRAC2D3DTV9 90 aa12.29□□□□□ -0.44
LIN28B-202ENST00000635857 M0R3E3 92 aa12.29□□□□□ -0.44
LIN28B-202ENST00000635857 NDUFB4O95168 129 aa12.29□□□□□ -0.44
LIN28B-202ENST00000635857 CDC34P49427 236 aaPredicted RBP12.29□□□□□ -0.44
LIN28B-202ENST00000635857 FAM74A1Q5RGS3 127 aa12.29□□□□□ -0.44
LIN28B-202ENST00000635857 C1orf158Q8N1D5 194 aa12.29□□□□□ -0.44
LIN28B-202ENST00000635857 LYPD1Q8N2G4 141 aa12.29□□□□□ -0.44
LIN28B-202ENST00000635857 LOC102723971A0A1B0GUV8 181 aa12.28□□□□□ -0.44
LIN28B-202ENST00000635857 NPIPB6E9PJ23 425 aa12.28□□□□□ -0.44
LIN28B-202ENST00000635857 SPART-AS1P0CW21 52 aa12.28□□□□□ -0.44
LIN28B-202ENST00000635857 TMEM78Q5T7P6 136 aa12.28□□□□□ -0.44
LIN28B-202ENST00000635857 RPL7L1Q6DKI1 246 aaKnown RBP12.28□□□□□ -0.44
LIN28B-202ENST00000635857 RPP25LQ8N5L8 163 aaKnown RBP12.28□□□□□ -0.44
LIN28B-202ENST00000635857 PHYHIPLQ96FC7 376 aa12.28□□□□□ -0.44
LIN28B-202ENST00000635857 ODF3Q96PU9 254 aa12.28□□□□□ -0.44
LIN28B-202ENST00000635857 LINC01587Q99440 93 aa12.28□□□□□ -0.44
LIN28B-202ENST00000635857 CRXO43186 299 aaPredicted RBP12.27□□□□□ -0.45
LIN28B-202ENST00000635857 RANP62826 216 aaKnown RBP12.27□□□□□ -0.45
LIN28B-202ENST00000635857 C20orf144Q9BQM9 153 aa12.27□□□□□ -0.45
LIN28B-202ENST00000635857 SMLR1H3BR10 107 aa12.26□□□□□ -0.45
LIN28B-202ENST00000635857 J3KRW8 73 aa12.26□□□□□ -0.45
LIN28B-202ENST00000635857 CMTM2Q8TAZ6 248 aa12.26□□□□□ -0.45
LIN28B-202ENST00000635857 LINC00477Q96M19 166 aa12.26□□□□□ -0.45
LIN28B-202ENST00000635857 ACTR3CQ9C0K3 210 aaPredicted RBP12.26□□□□□ -0.45
LIN28B-202ENST00000635857 SH3BGRL3Q9H299 93 aa12.26□□□□□ -0.45
LIN28B-202ENST00000635857 Q9H3A6 140 aa12.26□□□□□ -0.45
LIN28B-202ENST00000635857 STARD9Q9P2P6 4700 aa12.25□□□□□ -0.45
LIN28B-202ENST00000635857 TRAV10A0A0B4J240 114 aa12.25□□□□□ -0.45
LIN28B-202ENST00000635857 H7BYZ3 331 aa12.25□□□□□ -0.45
LIN28B-202ENST00000635857 HTN1P15515 57 aa12.25□□□□□ -0.45
LIN28B-202ENST00000635857 RXFP4Q8TDU9 374 aa12.25□□□□□ -0.45
LIN28B-202ENST00000635857 C2CD4CQ8TF44 421 aa12.25□□□□□ -0.45
LIN28B-202ENST00000635857 ZNF503Q96F45 646 aa12.25□□□□□ -0.45
LIN28B-202ENST00000635857 NIPSNAP3BQ9BS92 247 aa12.25□□□□□ -0.45
LIN28B-202ENST00000635857 LCE6AA0A183 80 aa12.24□□□□□ -0.45
LIN28B-202ENST00000635857 G3V3Q6 166 aa12.24□□□□□ -0.45
LIN28B-202ENST00000635857 HMGB3O15347 200 aaKnown RBP12.24□□□□□ -0.45
LIN28B-202ENST00000635857 ARL14EPLP0DKL9 152 aa12.24□□□□□ -0.45
LIN28B-202ENST00000635857 CT45A10P0DMU9 189 aa12.24□□□□□ -0.45
LIN28B-202ENST00000635857 TAS2R60P59551 318 aa12.24□□□□□ -0.45
LIN28B-202ENST00000635857 ZNF345Q14585 488 aa12.24□□□□□ -0.45
LIN28B-202ENST00000635857 AKR1C8PQ5T2L2 129 aa12.24□□□□□ -0.45
LIN28B-202ENST00000635857 Q6ZTC4 211 aa12.24□□□□□ -0.45
LIN28B-202ENST00000635857 CCDC28AQ8IWP9 274 aa12.24□□□□□ -0.45
LIN28B-202ENST00000635857 ARPC5LQ9BPX5 153 aa12.24□□□□□ -0.45
LIN28B-202ENST00000635857 OTORQ9NRC9 128 aa12.24□□□□□ -0.45
LIN28B-202ENST00000635857 CELA1Q9UNI1 258 aa12.24□□□□□ -0.45
LIN28B-202ENST00000635857 YTHDF2Q9Y5A9 579 aaKnown RBP12.24□□□□□ -0.45
LIN28B-202ENST00000635857 IGKV2-40A0A087WW87 121 aaPredicted RBP12.23□□□□□ -0.45
LIN28B-202ENST00000635857 KANTRA0A1W2PQU2 76 aa12.23□□□□□ -0.45
LIN28B-202ENST00000635857 ZNF705GA8MUZ8 300 aaPredicted RBP12.23□□□□□ -0.45
LIN28B-202ENST00000635857 EIF3GO75821 320 aaKnown RBP eCLIP12.23□□□□□ -0.45
LIN28B-202ENST00000635857 IGKV2D-40P01614 121 aaPredicted RBP12.23□□□□□ -0.45
LIN28B-202ENST00000635857 SLC25A5P05141 298 aaKnown RBP12.23□□□□□ -0.45
LIN28B-202ENST00000635857 ERCC8Q13216 396 aa12.23□□□□□ -0.45
LIN28B-202ENST00000635857 FAM222AQ5U5X8 452 aa12.23□□□□□ -0.45
LIN28B-202ENST00000635857 GFI1BQ5VTD9 330 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms