RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 RALGAPA1Q6GYQ0 2036 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.5□□□□□ -2.17
TCF4-264ENST00000628391 TRAV40A0A0B4J280 105 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 TRBV30A0A0K0K1B3 111 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 TEX49A0A1B0GTD5 131 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP1.5□□□□□ -2.17
TCF4-264ENST00000628391 TMEM89A2RUT3 159 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 C5orf63A6NC05 138 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 C15orf61A6NNL5 157 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 ZNF815PA8K554 130 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 ZNF785A8K8V0 405 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 H0YGG7 62 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 TGFBR3LH3BV60 316 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 H7C1H1 209 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 OVOL3O00110 214 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 UPK2O00526 184 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 SPINT2O43291 252 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 COX7A2P2O60397 106 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 TCRAP04437 139 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 PRSS1P07477 247 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 ELANEP08246 267 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 PYYP10082 97 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 COX6B1P14854 86 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 HOXB4P17483 251 aaPredicted RBP1.5□□□□□ -2.17
TCF4-264ENST00000628391 PRDX2P32119 198 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 CDAP32320 146 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 SSR4P51571 173 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 CCL11P51671 97 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 ATP5EP56381 51 aaPredicted RBP1.5□□□□□ -2.17
TCF4-264ENST00000628391 SYNJ2BPP57105 145 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 ERVK-16P61578 105 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 MRPS36P82909 103 aaKnown RBP1.5□□□□□ -2.17
TCF4-264ENST00000628391 CD164Q04900 197 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 FAM27E3Q08E93 113 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 GTF3C1Q12789 2109 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 TCF15Q12870 199 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 SRSF9Q13242 221 aaKnown RBP eCLIP1.5□□□□□ -2.17
TCF4-264ENST00000628391 SPINK9Q5DT21 86 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 CLLU1OSQ5K130 101 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 FAM201AQ5SY85 155 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 TMEM200BQ69YZ2 307 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 C2orf82Q6UX34 121 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 SCGB1D4Q6XE38 83 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 ZNF497Q6ZNH5 498 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 MKXQ8IYA7 352 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 TDHQ8IZJ6 230 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 SLC25A45Q8N413 288 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 LINC00311Q8N616 119 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 MAPKAPK5-AS1Q8N8E1 139 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 Q8N8P6 123 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 NEXN-AS1Q8NBZ9 246 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 MDS2Q8NDY4 140 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 FLVCR1-AS1Q8TAF5 88 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 ZNF524Q96C55 264 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 FXYD5Q96DB9 178 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 C1orf159Q96HA4 380 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 FAM167A-AS1Q96KT0 104 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 C16orf92Q96LL3 132 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 PAXXQ9BUH6 204 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 PHPT1Q9NRX4 125 aaPredicted RBP1.5□□□□□ -2.17
TCF4-264ENST00000628391 MRPL35Q9NZE8 188 aaKnown RBP1.5□□□□□ -2.17
TCF4-264ENST00000628391 RNF181Q9P0P0 153 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 PEMTQ9UBM1 199 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 PRO1854Q9UHT4 67 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 EML6Q6ZMW3 1958 aa1.5□□□□□ -2.17
TCF4-264ENST00000628391 SNRNP200O75643 2136 aaKnown RBP1.49□□□□□ -2.17
TCF4-264ENST00000628391 SMIM26A0A096LP01 95 aa1.49□□□□□ -2.17
TCF4-264ENST00000628391 TRGV5A0A0B4J1U4 118 aa1.49□□□□□ -2.17
TCF4-264ENST00000628391 A0A0J9YY99 117 aa1.49□□□□□ -2.17
TCF4-264ENST00000628391 LOC389332A0A1B0GUA5 103 aa1.49□□□□□ -2.17
TCF4-264ENST00000628391 KNCNA6PVL3 124 aa1.49□□□□□ -2.17
TCF4-264ENST00000628391 C17orf100A8MU93 164 aa1.49□□□□□ -2.17
TCF4-264ENST00000628391 C17orf98A8MV24 154 aa1.49□□□□□ -2.17
TCF4-264ENST00000628391 A8MZ25 164 aa1.49□□□□□ -2.17
TCF4-264ENST00000628391 H0YIG0 161 aa1.49□□□□□ -2.17
TCF4-264ENST00000628391 J3QT63 122 aa1.49□□□□□ -2.17
TCF4-264ENST00000628391 CCL16O15467 120 aa1.49□□□□□ -2.17
TCF4-264ENST00000628391 CXCL13O43927 109 aa1.49□□□□□ -2.17
TCF4-264ENST00000628391 FCGR3BO75015 233 aa1.49□□□□□ -2.17
TCF4-264ENST00000628391 SCRG1O75711 98 aa1.49□□□□□ -2.17
TCF4-264ENST00000628391 NGFP01138 241 aa1.49□□□□□ -2.17
TCF4-264ENST00000628391 IGHV3-13P01766 116 aa1.49□□□□□ -2.17
TCF4-264ENST00000628391 IGHV3-30P01768 117 aa1.49□□□□□ -2.17
TCF4-264ENST00000628391 IGHV3-33P01772 117 aa1.49□□□□□ -2.17
TCF4-264ENST00000628391 COX6CP09669 75 aa1.49□□□□□ -2.17
TCF4-264ENST00000628391 ZNF883P0CG24 379 aa1.49□□□□□ -2.17
TCF4-264ENST00000628391 CFC1BP0CG36 223 aa1.49□□□□□ -2.17
TCF4-264ENST00000628391 CFC1P0CG37 223 aa1.49□□□□□ -2.17
TCF4-264ENST00000628391 INAFM2P0DMQ5 153 aa1.49□□□□□ -2.17
TCF4-264ENST00000628391 IGHV3-30-5P0DP03 117 aa1.49□□□□□ -2.17
TCF4-264ENST00000628391 LIFP15018 202 aa1.49□□□□□ -2.17
TCF4-264ENST00000628391 WT1P19544 449 aaPredicted RBP1.49□□□□□ -2.17
TCF4-264ENST00000628391 FKBP2P26885 142 aaKnown RBP1.49□□□□□ -2.17
TCF4-264ENST00000628391 CD52P31358 61 aa1.49□□□□□ -2.17
TCF4-264ENST00000628391 CKS2P33552 79 aa1.49□□□□□ -2.17
TCF4-264ENST00000628391 TNFRSF4P43489 277 aa1.49□□□□□ -2.17
TCF4-264ENST00000628391 CRIP2P52943 208 aaPredicted RBP1.49□□□□□ -2.17
TCF4-264ENST00000628391 PCBD1P61457 104 aa1.49□□□□□ -2.17
TCF4-264ENST00000628391 CFHR3Q02985 330 aa1.49□□□□□ -2.17
TCF4-264ENST00000628391 Q1RN00 199 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms