RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 OR11H1Q8NG94 326 aa5.74□□□□□ -1.49
PTP4A1-206ENST00000627002 MRPL53Q96EL3 112 aaKnown RBP5.74□□□□□ -1.49
PTP4A1-206ENST00000627002 CTDSP1Q9GZU7 261 aa5.74□□□□□ -1.49
PTP4A1-206ENST00000627002 SMCO4Q9NRQ5 59 aa5.74□□□□□ -1.49
PTP4A1-206ENST00000627002 RPH3ALQ9UNE2 315 aa5.74□□□□□ -1.49
PTP4A1-206ENST00000627002 NIPBLQ6KC79 2804 aaeCLIP5.74□□□□□ -1.49
PTP4A1-206ENST00000627002 ACANP16112 2415 aa5.74□□□□□ -1.49
PTP4A1-206ENST00000627002 TRBV20OR9-2A0A075B6H5 130 aa5.73□□□□□ -1.49
PTP4A1-206ENST00000627002 CXorf65A6NEN9 183 aa5.73□□□□□ -1.49
PTP4A1-206ENST00000627002 C2orf70A6NJV1 201 aa5.73□□□□□ -1.49
PTP4A1-206ENST00000627002 DIRC3C9JPN6 131 aa5.73□□□□□ -1.49
PTP4A1-206ENST00000627002 TSPAN4O14817 238 aa5.73□□□□□ -1.49
PTP4A1-206ENST00000627002 PPP1R2P9O14990 202 aa5.73□□□□□ -1.49
PTP4A1-206ENST00000627002 SLURP1P55000 103 aa5.73□□□□□ -1.49
PTP4A1-206ENST00000627002 DEFB136Q30KP8 78 aa5.73□□□□□ -1.49
PTP4A1-206ENST00000627002 GOLT1AQ6ZVE7 132 aa5.73□□□□□ -1.49
PTP4A1-206ENST00000627002 BAGE2Q86Y30 109 aa5.73□□□□□ -1.49
PTP4A1-206ENST00000627002 ISOC2Q96AB3 205 aa5.73□□□□□ -1.49
PTP4A1-206ENST00000627002 ANAPC16Q96DE5 110 aa5.73□□□□□ -1.49
PTP4A1-206ENST00000627002 C16orf92Q96LL3 132 aa5.73□□□□□ -1.49
PTP4A1-206ENST00000627002 IGF2BP2-AS1Q96M15 143 aa5.73□□□□□ -1.49
PTP4A1-206ENST00000627002 CITED2Q99967 270 aaPredicted RBP5.73□□□□□ -1.49
PTP4A1-206ENST00000627002 TUBA4BQ9H853 241 aa5.73□□□□□ -1.49
PTP4A1-206ENST00000627002 NRN1Q9NPD7 142 aa5.73□□□□□ -1.49
PTP4A1-206ENST00000627002 BIN3Q9NQY0 253 aa5.73□□□□□ -1.49
PTP4A1-206ENST00000627002 TMEM242Q9NWH2 141 aa5.73□□□□□ -1.49
PTP4A1-206ENST00000627002 HIVEP2P31629 2446 aa5.73□□□□□ -1.49
PTP4A1-206ENST00000627002 TRAV34A0A0B4J273 112 aa5.72□□□□□ -1.49
PTP4A1-206ENST00000627002 A0A1W2PRX2 142 aa5.72□□□□□ -1.49
PTP4A1-206ENST00000627002 RBAKDNA6NC62 111 aa5.72□□□□□ -1.49
PTP4A1-206ENST00000627002 CCL24O00175 119 aa5.72□□□□□ -1.49
PTP4A1-206ENST00000627002 ISLRO14498 428 aa5.72□□□□□ -1.49
PTP4A1-206ENST00000627002 LTAP01374 205 aa5.72□□□□□ -1.49
PTP4A1-206ENST00000627002 FOLR2P14207 255 aa5.72□□□□□ -1.49
PTP4A1-206ENST00000627002 CBLN1P23435 193 aa5.72□□□□□ -1.49
PTP4A1-206ENST00000627002 ID1P41134 155 aa5.72□□□□□ -1.49
PTP4A1-206ENST00000627002 RPL11P62913 178 aaKnown RBP5.72□□□□□ -1.49
PTP4A1-206ENST00000627002 FOXL1Q12952 345 aa5.72□□□□□ -1.49
PTP4A1-206ENST00000627002 FHL3Q13643 280 aa5.72□□□□□ -1.49
PTP4A1-206ENST00000627002 PSG3Q16557 428 aa5.72□□□□□ -1.49
PTP4A1-206ENST00000627002 LCN12Q6JVE5 192 aa5.72□□□□□ -1.49
PTP4A1-206ENST00000627002 TCF24Q7RTU0 167 aa5.72□□□□□ -1.49
PTP4A1-206ENST00000627002 NDUFA11Q86Y39 141 aa5.72□□□□□ -1.49
PTP4A1-206ENST00000627002 C11orf44Q8N8P7 122 aa5.72□□□□□ -1.49
PTP4A1-206ENST00000627002 OR9G4Q8NGQ1 327 aa5.72□□□□□ -1.49
PTP4A1-206ENST00000627002 OCC1Q8TAD7 63 aa5.72□□□□□ -1.49
PTP4A1-206ENST00000627002 SFRP2Q96HF1 295 aa5.72□□□□□ -1.49
PTP4A1-206ENST00000627002 RAX2Q96IS3 184 aa5.72□□□□□ -1.49
PTP4A1-206ENST00000627002 LINC00479Q96M42 142 aa5.72□□□□□ -1.49
PTP4A1-206ENST00000627002 ZFP30Q9Y2G7 519 aa5.72□□□□□ -1.49
PTP4A1-206ENST00000627002 TRAV8-2A0A0B4J237 113 aa5.71□□□□□ -1.5
PTP4A1-206ENST00000627002 PGPEP1LA6NFU8 196 aa5.71□□□□□ -1.5
PTP4A1-206ENST00000627002 H7BYZ3 331 aa5.71□□□□□ -1.5
PTP4A1-206ENST00000627002 M0R3E3 92 aa5.71□□□□□ -1.5
PTP4A1-206ENST00000627002 DNASE2O00115 360 aaPredicted RBP5.71□□□□□ -1.5
PTP4A1-206ENST00000627002 SOCS3O14543 225 aa5.71□□□□□ -1.5
PTP4A1-206ENST00000627002 GCGP01275 180 aa5.71□□□□□ -1.5
PTP4A1-206ENST00000627002 MGST1P10620 155 aaKnown RBP5.71□□□□□ -1.5
PTP4A1-206ENST00000627002 PAFAH1B2P68402 229 aa5.71□□□□□ -1.5
PTP4A1-206ENST00000627002 FLI1Q01543 452 aaPredicted RBP5.71□□□□□ -1.5
PTP4A1-206ENST00000627002 RNF212Q495C1 297 aa5.71□□□□□ -1.5
PTP4A1-206ENST00000627002 TMEM88Q6PEY1 159 aa5.71□□□□□ -1.5
PTP4A1-206ENST00000627002 Q86TA4 180 aa5.71□□□□□ -1.5
PTP4A1-206ENST00000627002 CBLN2Q8IUK8 224 aa5.71□□□□□ -1.5
PTP4A1-206ENST00000627002 C15orf54Q8N8G6 183 aa5.71□□□□□ -1.5
PTP4A1-206ENST00000627002 DLX4Q92988 240 aaPredicted RBP5.71□□□□□ -1.5
PTP4A1-206ENST00000627002 DUX3Q96PT4 197 aa5.71□□□□□ -1.5
PTP4A1-206ENST00000627002 MLXQ9UH92 298 aa5.71□□□□□ -1.5
PTP4A1-206ENST00000627002 PSG8Q9UQ74 426 aa5.71□□□□□ -1.5
PTP4A1-206ENST00000627002 FN1P02751 2386 aaKnown RBP5.71□□□□□ -1.5
PTP4A1-206ENST00000627002 JMJD1CQ15652 2540 aa5.7□□□□□ -1.5
PTP4A1-206ENST00000627002 IGKV2-40A0A087WW87 121 aaPredicted RBP5.7□□□□□ -1.5
PTP4A1-206ENST00000627002 TRAV2A0A0B4J234 112 aa5.7□□□□□ -1.5
PTP4A1-206ENST00000627002 K7EN84 100 aa5.7□□□□□ -1.5
PTP4A1-206ENST00000627002 OVOL1O14753 267 aa5.7□□□□□ -1.5
PTP4A1-206ENST00000627002 IGKV2D-40P01614 121 aaPredicted RBP5.7□□□□□ -1.5
PTP4A1-206ENST00000627002 IGLV2-11P01706 119 aa5.7□□□□□ -1.5
PTP4A1-206ENST00000627002 IGLV2-8P01709 118 aa5.7□□□□□ -1.5
PTP4A1-206ENST00000627002 S100PP25815 95 aa5.7□□□□□ -1.5
PTP4A1-206ENST00000627002 HLA-DMBP28068 263 aa5.7□□□□□ -1.5
PTP4A1-206ENST00000627002 ERVFC1-1P60608 527 aa5.7□□□□□ -1.5
PTP4A1-206ENST00000627002 SAPCD1Q5SSQ6 148 aa5.7□□□□□ -1.5
PTP4A1-206ENST00000627002 IGFL4Q6B9Z1 124 aa5.7□□□□□ -1.5
PTP4A1-206ENST00000627002 PRNTQ86SH4 94 aa5.7□□□□□ -1.5
PTP4A1-206ENST00000627002 TMEM183AQ8IXX5 376 aa5.7□□□□□ -1.5
PTP4A1-206ENST00000627002 RNF182Q8N6D2 247 aa5.7□□□□□ -1.5
PTP4A1-206ENST00000627002 ZNF738Q8NE65 137 aa5.7□□□□□ -1.5
PTP4A1-206ENST00000627002 OR10G8Q8NGN5 311 aa5.7□□□□□ -1.5
PTP4A1-206ENST00000627002 NDFIP1Q9BT67 221 aa5.7□□□□□ -1.5
PTP4A1-206ENST00000627002 MLST8Q9BVC4 326 aa5.7□□□□□ -1.5
PTP4A1-206ENST00000627002 MS4A6AQ9H2W1 248 aa5.7□□□□□ -1.5
PTP4A1-206ENST00000627002 OSTCQ9NRP0 149 aa5.7□□□□□ -1.5
PTP4A1-206ENST00000627002 AURKAIP1Q9NWT8 199 aaPredicted RBP5.7□□□□□ -1.5
PTP4A1-206ENST00000627002 SIGLEC8Q9NYZ4 499 aa5.7□□□□□ -1.5
PTP4A1-206ENST00000627002 IGKV3-7A0A075B6H7 116 aa5.69□□□□□ -1.5
PTP4A1-206ENST00000627002 TRAV8-1A0A0A6YYK1 113 aa5.69□□□□□ -1.5
PTP4A1-206ENST00000627002 ZNF705FA8MVS1 300 aaPredicted RBP5.69□□□□□ -1.5
PTP4A1-206ENST00000627002 CSN3P07498 182 aa5.69□□□□□ -1.5
PTP4A1-206ENST00000627002 EDN2P20800 178 aa5.69□□□□□ -1.5
PTP4A1-206ENST00000627002 SNRPD3P62318 126 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms