RNA–Protein interactions for RNA: ENST00000624071.1

LINC01006-208, Transcript of long intergenic non-protein coding RNA 1006, human

Gene LINC01006, Length 651 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01006-208	ENST00000624071	AMBP	P02760	352 aa		13.71	□□□□□ -0.21
LINC01006-208	ENST00000624071	HSD17B11	Q8NBQ5	300 aa		13.71	□□□□□ -0.21
LINC01006-208	ENST00000624071	INO80E	Q8NBZ0	244 aa	Predicted RBP	13.71	□□□□□ -0.21
LINC01006-208	ENST00000624071	RNF141	Q8WVD5	230 aa		13.71	□□□□□ -0.21
LINC01006-208	ENST00000624071	CELA1	Q9UNI1	258 aa		13.71	□□□□□ -0.21
LINC01006-208	ENST00000624071	RNF222	A6NCQ9	220 aa		13.7	□□□□□ -0.22
LINC01006-208	ENST00000624071	NUPR2	A6NF83	97 aa		13.7	□□□□□ -0.22
LINC01006-208	ENST00000624071	INS	P01308	110 aa		13.7	□□□□□ -0.22
LINC01006-208	ENST00000624071	NBEAP1	P0C6P0	100 aa		13.7	□□□□□ -0.22
LINC01006-208	ENST00000624071	ZNF767P	Q75MW2	155 aa		13.7	□□□□□ -0.22
LINC01006-208	ENST00000624071	FXYD5	Q96DB9	178 aa		13.7	□□□□□ -0.22
LINC01006-208	ENST00000624071	NEU1	Q99519	415 aa		13.7	□□□□□ -0.22
LINC01006-208	ENST00000624071	CSMD3	Q7Z407	3707 aa		13.7	□□□□□ -0.22
LINC01006-208	ENST00000624071	DYNC2H1	Q8NCM8	4307 aa	Known RBP	13.7	□□□□□ -0.22
LINC01006-208	ENST00000624071	LCE6A	A0A183	80 aa		13.69	□□□□□ -0.22
LINC01006-208	ENST00000624071	SMIM9	A6NGZ8	99 aa		13.69	□□□□□ -0.22
LINC01006-208	ENST00000624071		G3V3Q6	166 aa		13.69	□□□□□ -0.22
LINC01006-208	ENST00000624071	SMLR1	H3BR10	107 aa		13.69	□□□□□ -0.22
LINC01006-208	ENST00000624071	PRM2	P04554	102 aa		13.69	□□□□□ -0.22
LINC01006-208	ENST00000624071	RAB2A	P61019	212 aa		13.69	□□□□□ -0.22
LINC01006-208	ENST00000624071	ZNF266	Q14584	549 aa		13.69	□□□□□ -0.22
LINC01006-208	ENST00000624071	ICAM4	Q14773	271 aa		13.69	□□□□□ -0.22
LINC01006-208	ENST00000624071	ACOT6	Q3I5F7	207 aa	Predicted RBP	13.69	□□□□□ -0.22
LINC01006-208	ENST00000624071	ZNF503	Q96F45	646 aa		13.69	□□□□□ -0.22
LINC01006-208	ENST00000624071	TNFSF18	Q9UNG2	199 aa		13.69	□□□□□ -0.22
LINC01006-208	ENST00000624071	RYR3	Q15413	4870 aa		13.69	□□□□□ -0.22
LINC01006-208	ENST00000624071	TENM2	Q9NT68	2774 aa		13.68	□□□□□ -0.22
LINC01006-208	ENST00000624071	HBE1	P02100	147 aa		13.68	□□□□□ -0.22
LINC01006-208	ENST00000624071	PDE6H	Q13956	83 aa		13.68	□□□□□ -0.22
LINC01006-208	ENST00000624071	FAM122C	Q6P4D5	195 aa		13.68	□□□□□ -0.22
LINC01006-208	ENST00000624071	RPP25L	Q8N5L8	163 aa	Known RBP	13.68	□□□□□ -0.22
LINC01006-208	ENST00000624071	AAMDC	Q9H7C9	122 aa		13.68	□□□□□ -0.22
LINC01006-208	ENST00000624071	KLK5	Q9Y337	293 aa	Predicted RBP	13.68	□□□□□ -0.22
LINC01006-208	ENST00000624071	LOC102723971	A0A1B0GUV8	181 aa		13.67	□□□□□ -0.22
LINC01006-208	ENST00000624071	ZNF705G	A8MUZ8	300 aa	Predicted RBP	13.67	□□□□□ -0.22
LINC01006-208	ENST00000624071		J3KRW8	73 aa		13.67	□□□□□ -0.22
LINC01006-208	ENST00000624071	M6PR	P20645	277 aa		13.67	□□□□□ -0.22
LINC01006-208	ENST00000624071	ATP6V0C	P27449	155 aa		13.67	□□□□□ -0.22
LINC01006-208	ENST00000624071	UBE2L3	P68036	154 aa	Known RBP	13.67	□□□□□ -0.22
LINC01006-208	ENST00000624071	ERCC8	Q13216	396 aa		13.67	□□□□□ -0.22
LINC01006-208	ENST00000624071	KIR3DS1	Q14943	382 aa		13.67	□□□□□ -0.22
LINC01006-208	ENST00000624071	RRN3P1	Q2M238	152 aa		13.67	□□□□□ -0.22
LINC01006-208	ENST00000624071	MRPL53	Q96EL3	112 aa	Known RBP	13.67	□□□□□ -0.22
LINC01006-208	ENST00000624071	PHYHIPL	Q96FC7	376 aa		13.67	□□□□□ -0.22
LINC01006-208	ENST00000624071	PRELID1	Q9Y255	219 aa		13.67	□□□□□ -0.22
LINC01006-208	ENST00000624071		A0A1W2PPV4	95 aa		13.66	□□□□□ -0.22
LINC01006-208	ENST00000624071	NPIPB6	E9PJ23	425 aa		13.66	□□□□□ -0.22
LINC01006-208	ENST00000624071	HMGB3	O15347	200 aa	Known RBP	13.66	□□□□□ -0.22
LINC01006-208	ENST00000624071	JTB	O76095	146 aa		13.66	□□□□□ -0.22
LINC01006-208	ENST00000624071	CT45A10	P0DMU9	189 aa		13.66	□□□□□ -0.22
LINC01006-208	ENST00000624071	CDKN1B	P46527	198 aa		13.66	□□□□□ -0.22
LINC01006-208	ENST00000624071	TAS2R45	P59539	299 aa		13.66	□□□□□ -0.22
LINC01006-208	ENST00000624071	KHDC3L	Q587J8	217 aa		13.66	□□□□□ -0.22
LINC01006-208	ENST00000624071	RPL7L1	Q6DKI1	246 aa	Known RBP	13.66	□□□□□ -0.22
LINC01006-208	ENST00000624071		Q6ZTC4	211 aa		13.66	□□□□□ -0.22
LINC01006-208	ENST00000624071	OR10G4	Q8NGN3	311 aa		13.66	□□□□□ -0.22
LINC01006-208	ENST00000624071	OR10G9	Q8NGN4	311 aa		13.66	□□□□□ -0.22
LINC01006-208	ENST00000624071	OR10G7	Q8NGN6	311 aa		13.66	□□□□□ -0.22
LINC01006-208	ENST00000624071	LINC01587	Q99440	93 aa		13.66	□□□□□ -0.22
LINC01006-208	ENST00000624071	SH3BGRL3	Q9H299	93 aa		13.66	□□□□□ -0.22
LINC01006-208	ENST00000624071	ARPC5	O15511	151 aa		13.65	□□□□□ -0.22
LINC01006-208	ENST00000624071	RAN	P62826	216 aa	Known RBP	13.65	□□□□□ -0.22
LINC01006-208	ENST00000624071	C12orf74	Q32Q52	190 aa		13.65	□□□□□ -0.22
LINC01006-208	ENST00000624071	PLA2G2E	Q9NZK7	142 aa		13.65	□□□□□ -0.22
LINC01006-208	ENST00000624071	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	13.64	□□□□□ -0.23
LINC01006-208	ENST00000624071	TMEM189	A5PLL7	270 aa		13.64	□□□□□ -0.23
LINC01006-208	ENST00000624071	IGKV2D-40	P01614	121 aa	Predicted RBP	13.64	□□□□□ -0.23
LINC01006-208	ENST00000624071	HTN1	P15515	57 aa		13.64	□□□□□ -0.23
LINC01006-208	ENST00000624071	YTHDF2	Q9Y5A9	579 aa	Known RBP	13.64	□□□□□ -0.23
LINC01006-208	ENST00000624071	SACS	Q9NZJ4	4579 aa		13.64	□□□□□ -0.23
LINC01006-208	ENST00000624071	BORCS7-ASMT	A0A0B4J1R7	106 aa		13.63	□□□□□ -0.23
LINC01006-208	ENST00000624071	SPART-AS1	P0CW21	52 aa		13.63	□□□□□ -0.23
LINC01006-208	ENST00000624071	AZU1	P20160	251 aa		13.63	□□□□□ -0.23
LINC01006-208	ENST00000624071	TSPO	P30536	169 aa		13.63	□□□□□ -0.23
LINC01006-208	ENST00000624071	FAM222A	Q5U5X8	452 aa		13.63	□□□□□ -0.23
LINC01006-208	ENST00000624071	GFI1B	Q5VTD9	330 aa		13.63	□□□□□ -0.23
LINC01006-208	ENST00000624071	OR2G3	Q8NGZ4	309 aa		13.63	□□□□□ -0.23
LINC01006-208	ENST00000624071	PSMG3	Q9BT73	122 aa	Predicted RBP	13.63	□□□□□ -0.23
LINC01006-208	ENST00000624071	AGPAT4-IT1	Q9H0P7	198 aa		13.63	□□□□□ -0.23
LINC01006-208	ENST00000624071	LEP	P41159	167 aa		13.62	□□□□□ -0.23
LINC01006-208	ENST00000624071	PLEC	Q15149	4684 aa	Known RBP	13.62	□□□□□ -0.23
LINC01006-208	ENST00000624071	VGLL1	Q99990	258 aa		13.62	□□□□□ -0.23
LINC01006-208	ENST00000624071		Q9H3A6	140 aa		13.62	□□□□□ -0.23
LINC01006-208	ENST00000624071	CDC34	P49427	236 aa	Predicted RBP	13.61	□□□□□ -0.23
LINC01006-208	ENST00000624071	C2CD4C	Q8TF44	421 aa		13.61	□□□□□ -0.23
LINC01006-208	ENST00000624071	DKK2	Q9UBU2	259 aa		13.61	□□□□□ -0.23
LINC01006-208	ENST00000624071	RYR2	Q92736	4967 aa		13.61	□□□□□ -0.23
LINC01006-208	ENST00000624071	TRAV10	A0A0B4J240	114 aa		13.6	□□□□□ -0.23
LINC01006-208	ENST00000624071	TRAV12-3	A0A0B4J271	114 aa		13.6	□□□□□ -0.23
LINC01006-208	ENST00000624071	IGLL5	B9A064	214 aa		13.6	□□□□□ -0.23
LINC01006-208	ENST00000624071	C11orf94	C9JXX5	98 aa		13.6	□□□□□ -0.23
LINC01006-208	ENST00000624071	TAS2R60	P59551	318 aa		13.6	□□□□□ -0.23
LINC01006-208	ENST00000624071	PQLC2	Q6ZP29	291 aa		13.6	□□□□□ -0.23
LINC01006-208	ENST00000624071	TMEM256	Q8N2U0	113 aa		13.6	□□□□□ -0.23
LINC01006-208	ENST00000624071	RAB24	Q969Q5	203 aa		13.6	□□□□□ -0.23
LINC01006-208	ENST00000624071	GNPNAT1	Q96EK6	184 aa	Predicted RBP	13.6	□□□□□ -0.23
LINC01006-208	ENST00000624071	HYLS1	Q96M11	299 aa		13.6	□□□□□ -0.23
LINC01006-208	ENST00000624071	LINC00477	Q96M19	166 aa		13.6	□□□□□ -0.23
LINC01006-208	ENST00000624071	ODF3	Q96PU9	254 aa		13.6	□□□□□ -0.23
LINC01006-208	ENST00000624071	ARL14EPL	P0DKL9	152 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms