RNA–Protein interactions for RNA: ENST00000623266.1

PCDHB9-202, Transcript of protocadherin beta 9, humanhuman

TSL 4

Gene PCDHB9, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-202ENST00000623266 ZNF586Q9NXT0 402 aa6.31□□□□□ -1.4
PCDHB9-202ENST00000623266 TRAV26-1A0A087WT03 109 aa6.3□□□□□ -1.4
PCDHB9-202ENST00000623266 TRAV12-3A0A0B4J271 114 aa6.3□□□□□ -1.4
PCDHB9-202ENST00000623266 A0A0J9YY99 117 aa6.3□□□□□ -1.4
PCDHB9-202ENST00000623266 FAM24AA6NFZ4 105 aa6.3□□□□□ -1.4
PCDHB9-202ENST00000623266 C16orf90A8MZG2 172 aa6.3□□□□□ -1.4
PCDHB9-202ENST00000623266 CCSO14618 274 aa6.3□□□□□ -1.4
PCDHB9-202ENST00000623266 ZNF324O75467 553 aaPredicted RBP6.3□□□□□ -1.4
PCDHB9-202ENST00000623266 CDK2AP2O75956 126 aa6.3□□□□□ -1.4
PCDHB9-202ENST00000623266 CXCL2P19875 107 aa6.3□□□□□ -1.4
PCDHB9-202ENST00000623266 IL15RAQ13261 267 aa6.3□□□□□ -1.4
PCDHB9-202ENST00000623266 C10orf113Q5VZT2 155 aa6.3□□□□□ -1.4
PCDHB9-202ENST00000623266 MIC13Q5XKP0 118 aa6.3□□□□□ -1.4
PCDHB9-202ENST00000623266 NRARPQ7Z6K4 114 aa6.3□□□□□ -1.4
PCDHB9-202ENST00000623266 VSIG2Q96IQ7 327 aa6.3□□□□□ -1.4
PCDHB9-202ENST00000623266 SLC50A1Q9BRV3 221 aa6.3□□□□□ -1.4
PCDHB9-202ENST00000623266 MGAT4CQ9UBM8 478 aa6.3□□□□□ -1.4
PCDHB9-202ENST00000623266 FAT1Q14517 4588 aa6.3□□□□□ -1.4
PCDHB9-202ENST00000623266 GAGE12BA1L429 117 aa6.29□□□□□ -1.4
PCDHB9-202ENST00000623266 J3KRW8 73 aa6.29□□□□□ -1.4
PCDHB9-202ENST00000623266 GAGE7O76087 117 aa6.29□□□□□ -1.4
PCDHB9-202ENST00000623266 CST7O76096 145 aa6.29□□□□□ -1.4
PCDHB9-202ENST00000623266 GAGE12FP0CL80 117 aa6.29□□□□□ -1.4
PCDHB9-202ENST00000623266 GAGE12GP0CL81 117 aa6.29□□□□□ -1.4
PCDHB9-202ENST00000623266 GAGE12IP0CL82 117 aa6.29□□□□□ -1.4
PCDHB9-202ENST00000623266 IL7P13232 177 aa6.29□□□□□ -1.4
PCDHB9-202ENST00000623266 CAMLGP49069 296 aa6.29□□□□□ -1.4
PCDHB9-202ENST00000623266 KRTAP10-2P60368 255 aa6.29□□□□□ -1.4
PCDHB9-202ENST00000623266 ERCC8Q13216 396 aa6.29□□□□□ -1.4
PCDHB9-202ENST00000623266 Q6ZQT7 251 aa6.29□□□□□ -1.4
PCDHB9-202ENST00000623266 Q6ZTI0 123 aa6.29□□□□□ -1.4
PCDHB9-202ENST00000623266 S100A7AQ86SG5 101 aa6.29□□□□□ -1.4
PCDHB9-202ENST00000623266 ZNF546Q86UE3 836 aa6.29□□□□□ -1.4
PCDHB9-202ENST00000623266 OR10J6PQ8NGY7 276 aa6.29□□□□□ -1.4
PCDHB9-202ENST00000623266 GNPNAT1Q96EK6 184 aaPredicted RBP6.29□□□□□ -1.4
PCDHB9-202ENST00000623266 ZNF503Q96F45 646 aa6.29□□□□□ -1.4
PCDHB9-202ENST00000623266 FAM19A4Q96LR4 140 aa6.29□□□□□ -1.4
PCDHB9-202ENST00000623266 AGPAT4-IT1Q9H0P7 198 aa6.29□□□□□ -1.4
PCDHB9-202ENST00000623266 WDR83OSQ9Y284 106 aa6.29□□□□□ -1.4
PCDHB9-202ENST00000623266 NPIPB6E9PJ23 425 aa6.28□□□□□ -1.4
PCDHB9-202ENST00000623266 H3BNG1 76 aa6.28□□□□□ -1.4
PCDHB9-202ENST00000623266 M0R3E3 92 aa6.28□□□□□ -1.4
PCDHB9-202ENST00000623266 COX7A2P2O60397 106 aa6.28□□□□□ -1.4
PCDHB9-202ENST00000623266 NDUFB4O95168 129 aa6.28□□□□□ -1.4
PCDHB9-202ENST00000623266 TCRBP04435 133 aa6.28□□□□□ -1.4
PCDHB9-202ENST00000623266 M6PRP20645 277 aa6.28□□□□□ -1.4
PCDHB9-202ENST00000623266 INPP1P49441 399 aa6.28□□□□□ -1.4
PCDHB9-202ENST00000623266 CD300CQ08708 224 aa6.28□□□□□ -1.4
PCDHB9-202ENST00000623266 DAZ2Q13117 558 aaKnown RBP6.28□□□□□ -1.4
PCDHB9-202ENST00000623266 CLINT1Q14677 625 aa6.28□□□□□ -1.4
PCDHB9-202ENST00000623266 VWC2Q2TAL6 325 aa6.28□□□□□ -1.4
PCDHB9-202ENST00000623266 TRIQKQ629K1 86 aa6.28□□□□□ -1.4
PCDHB9-202ENST00000623266 SPATA12Q7Z6I5 190 aa6.28□□□□□ -1.4
PCDHB9-202ENST00000623266 CCDC28AQ8IWP9 274 aa6.28□□□□□ -1.4
PCDHB9-202ENST00000623266 C11orf72Q8NBR9 251 aa6.28□□□□□ -1.4
PCDHB9-202ENST00000623266 UPK3BQ9BT76 320 aa6.28□□□□□ -1.4
PCDHB9-202ENST00000623266 RNF24Q9Y225 148 aa6.28□□□□□ -1.4
PCDHB9-202ENST00000623266 LSM5Q9Y4Y9 91 aaKnown RBP6.28□□□□□ -1.4
PCDHB9-202ENST00000623266 PXMP4Q9Y6I8 212 aa6.28□□□□□ -1.4
PCDHB9-202ENST00000623266 TRBV19A0A075B6N1 114 aa6.27□□□□□ -1.41
PCDHB9-202ENST00000623266 A0A096LPF7 62 aa6.27□□□□□ -1.41
PCDHB9-202ENST00000623266 CENPXA8MT69 81 aa6.27□□□□□ -1.41
PCDHB9-202ENST00000623266 RPL29P47914 159 aaKnown RBP6.27□□□□□ -1.41
PCDHB9-202ENST00000623266 CNPY1Q3B7I2 92 aa6.27□□□□□ -1.41
PCDHB9-202ENST00000623266 Q6ZRG5 221 aa6.27□□□□□ -1.41
PCDHB9-202ENST00000623266 Q8N1X5 172 aa6.27□□□□□ -1.41
PCDHB9-202ENST00000623266 MAPKAPK5-AS1Q8N8E1 139 aa6.27□□□□□ -1.41
PCDHB9-202ENST00000623266 CHAC2Q8WUX2 184 aa6.27□□□□□ -1.41
PCDHB9-202ENST00000623266 C2orf50Q96LR7 162 aa6.27□□□□□ -1.41
PCDHB9-202ENST00000623266 ODF3Q96PU9 254 aa6.27□□□□□ -1.41
PCDHB9-202ENST00000623266 SEC22CQ9BRL7 303 aa6.27□□□□□ -1.41
PCDHB9-202ENST00000623266 PYGO2Q9BRQ0 406 aa6.27□□□□□ -1.41
PCDHB9-202ENST00000623266 Q9H3A6 140 aa6.27□□□□□ -1.41
PCDHB9-202ENST00000623266 TMPRSS5Q9H3S3 457 aa6.27□□□□□ -1.41
PCDHB9-202ENST00000623266 GSN-AS1Q9NRJ2 163 aa6.27□□□□□ -1.41
PCDHB9-202ENST00000623266 TRAV6A0A075B6T7 132 aa6.26□□□□□ -1.41
PCDHB9-202ENST00000623266 IGSF23A1L1A6 192 aa6.26□□□□□ -1.41
PCDHB9-202ENST00000623266 SNURFLB1AK76 121 aa6.26□□□□□ -1.41
PCDHB9-202ENST00000623266 KLLNB2CW77 178 aa6.26□□□□□ -1.41
PCDHB9-202ENST00000623266 L7N2F9 121 aa6.26□□□□□ -1.41
PCDHB9-202ENST00000623266 LYRM1O43325 122 aa6.26□□□□□ -1.41
PCDHB9-202ENST00000623266 RLN2P04090 185 aa6.26□□□□□ -1.41
PCDHB9-202ENST00000623266 BCAP31P51572 246 aa6.26□□□□□ -1.41
PCDHB9-202ENST00000623266 VAMP2P63027 116 aa6.26□□□□□ -1.41
PCDHB9-202ENST00000623266 GUK1Q16774 197 aa6.26□□□□□ -1.41
PCDHB9-202ENST00000623266 Q6ZRN7 208 aaPredicted RBP6.26□□□□□ -1.41
PCDHB9-202ENST00000623266 EXOC3-AS1Q8N2X6 119 aa6.26□□□□□ -1.41
PCDHB9-202ENST00000623266 TMEM252Q8N6L7 170 aa6.26□□□□□ -1.41
PCDHB9-202ENST00000623266 LINC00477Q96M19 166 aa6.26□□□□□ -1.41
PCDHB9-202ENST00000623266 C18orf15Q96N68 181 aa6.26□□□□□ -1.41
PCDHB9-202ENST00000623266 C20orf85Q9H1P6 137 aa6.26□□□□□ -1.41
PCDHB9-202ENST00000623266 SLC39A9Q9NUM3 307 aa6.26□□□□□ -1.41
PCDHB9-202ENST00000623266 TP53TG3Q9ULZ0 132 aa6.26□□□□□ -1.41
PCDHB9-202ENST00000623266 MRPS16Q9Y3D3 137 aaKnown RBP6.26□□□□□ -1.41
PCDHB9-202ENST00000623266 KLF12Q9Y4X4 402 aa6.26□□□□□ -1.41
PCDHB9-202ENST00000623266 TNFRSF18Q9Y5U5 241 aa6.26□□□□□ -1.41
PCDHB9-202ENST00000623266 C5orf51A6NDU8 294 aa6.25□□□□□ -1.41
PCDHB9-202ENST00000623266 FAM25EA8MYX2 175 aa6.25□□□□□ -1.41
PCDHB9-202ENST00000623266 SPINK4O60575 86 aa6.25□□□□□ -1.41
PCDHB9-202ENST00000623266 ZNF253O75346 499 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms