RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 KLK5Q9Y337 293 aaPredicted RBP10.1□□□□□ -0.79
PCDHGC3-208ENST00000622836 TRAV12-2A0A075B6T6 113 aa10.09□□□□□ -0.79
PCDHGC3-208ENST00000622836 A0A1W2PPV4 95 aa10.09□□□□□ -0.79
PCDHGC3-208ENST00000622836 JTBO76095 146 aa10.09□□□□□ -0.79
PCDHGC3-208ENST00000622836 NBEAP1P0C6P0 100 aa10.09□□□□□ -0.79
PCDHGC3-208ENST00000622836 UBE2L3P68036 154 aaKnown RBP10.09□□□□□ -0.79
PCDHGC3-208ENST00000622836 KHDC3LQ587J8 217 aa10.09□□□□□ -0.79
PCDHGC3-208ENST00000622836 CEMP1Q6PRD7 247 aaPredicted RBP10.09□□□□□ -0.79
PCDHGC3-208ENST00000622836 BAP18Q8IXM2 172 aa10.09□□□□□ -0.79
PCDHGC3-208ENST00000622836 FAM167A-AS1Q96KT0 104 aa10.09□□□□□ -0.79
PCDHGC3-208ENST00000622836 PRELID1Q9Y255 219 aa10.09□□□□□ -0.79
PCDHGC3-208ENST00000622836 RFNGQ9Y644 331 aa10.09□□□□□ -0.79
PCDHGC3-208ENST00000622836 KMT2CQ8NEZ4 4911 aaKnown RBP10.09□□□□□ -0.79
PCDHGC3-208ENST00000622836 BORCS7-ASMTA0A0B4J1R7 106 aa10.08□□□□□ -0.8
PCDHGC3-208ENST00000622836 TMEM189A5PLL7 270 aa10.08□□□□□ -0.8
PCDHGC3-208ENST00000622836 PRAC2D3DTV9 90 aa10.08□□□□□ -0.8
PCDHGC3-208ENST00000622836 M6PRP20645 277 aa10.08□□□□□ -0.8
PCDHGC3-208ENST00000622836 TSPOP30536 169 aa10.08□□□□□ -0.8
PCDHGC3-208ENST00000622836 CDKN1BP46527 198 aa10.08□□□□□ -0.8
PCDHGC3-208ENST00000622836 RRN3P1Q2M238 152 aa10.08□□□□□ -0.8
PCDHGC3-208ENST00000622836 FAM122CQ6P4D5 195 aa10.08□□□□□ -0.8
PCDHGC3-208ENST00000622836 C1orf158Q8N1D5 194 aa10.08□□□□□ -0.8
PCDHGC3-208ENST00000622836 EXOC3-AS1Q8N2X6 119 aa10.08□□□□□ -0.8
PCDHGC3-208ENST00000622836 RNF141Q8WVD5 230 aa10.08□□□□□ -0.8
PCDHGC3-208ENST00000622836 LOC102723971A0A1B0GUV8 181 aa10.07□□□□□ -0.8
PCDHGC3-208ENST00000622836 M0R3E3 92 aa10.07□□□□□ -0.8
PCDHGC3-208ENST00000622836 ARPC5O15511 151 aa10.07□□□□□ -0.8
PCDHGC3-208ENST00000622836 NDUFB4O95168 129 aa10.07□□□□□ -0.8
PCDHGC3-208ENST00000622836 RAB2AP61019 212 aa10.07□□□□□ -0.8
PCDHGC3-208ENST00000622836 ICAM4Q14773 271 aa10.07□□□□□ -0.8
PCDHGC3-208ENST00000622836 RPP25LQ8N5L8 163 aaKnown RBP10.07□□□□□ -0.8
PCDHGC3-208ENST00000622836 OR10G4Q8NGN3 311 aa10.07□□□□□ -0.8
PCDHGC3-208ENST00000622836 OR10G9Q8NGN4 311 aa10.07□□□□□ -0.8
PCDHGC3-208ENST00000622836 OR10G7Q8NGN6 311 aa10.07□□□□□ -0.8
PCDHGC3-208ENST00000622836 FXYD5Q96DB9 178 aa10.07□□□□□ -0.8
PCDHGC3-208ENST00000622836 MRPL53Q96EL3 112 aaKnown RBP10.07□□□□□ -0.8
PCDHGC3-208ENST00000622836 TNFSF18Q9UNG2 199 aa10.07□□□□□ -0.8
PCDHGC3-208ENST00000622836 CSMD3Q7Z407 3707 aa10.06□□□□□ -0.8
PCDHGC3-208ENST00000622836 STARD9Q9P2P6 4700 aa10.06□□□□□ -0.8
PCDHGC3-208ENST00000622836 LCE6AA0A183 80 aa10.06□□□□□ -0.8
PCDHGC3-208ENST00000622836 RNF222A6NCQ9 220 aa10.06□□□□□ -0.8
PCDHGC3-208ENST00000622836 J3KRW8 73 aa10.06□□□□□ -0.8
PCDHGC3-208ENST00000622836 CRXO43186 299 aaPredicted RBP10.06□□□□□ -0.8
PCDHGC3-208ENST00000622836 EIF3GO75821 320 aaKnown RBP eCLIP10.06□□□□□ -0.8
PCDHGC3-208ENST00000622836 ATP6V0CP27449 155 aa10.06□□□□□ -0.8
PCDHGC3-208ENST00000622836 PHYHIPLQ96FC7 376 aa10.06□□□□□ -0.8
PCDHGC3-208ENST00000622836 LINC01587Q99440 93 aa10.06□□□□□ -0.8
PCDHGC3-208ENST00000622836 CELA1Q9UNI1 258 aa10.06□□□□□ -0.8
PCDHGC3-208ENST00000622836 ZNF705GA8MUZ8 300 aaPredicted RBP10.05□□□□□ -0.8
PCDHGC3-208ENST00000622836 NPIPB6E9PJ23 425 aa10.05□□□□□ -0.8
PCDHGC3-208ENST00000622836 SMLR1H3BR10 107 aa10.05□□□□□ -0.8
PCDHGC3-208ENST00000622836 SPART-AS1P0CW21 52 aa10.05□□□□□ -0.8
PCDHGC3-208ENST00000622836 HTN1P15515 57 aa10.05□□□□□ -0.8
PCDHGC3-208ENST00000622836 LEPP41159 167 aa10.05□□□□□ -0.8
PCDHGC3-208ENST00000622836 CSN1S1P47710 185 aa10.05□□□□□ -0.8
PCDHGC3-208ENST00000622836 CDC34P49427 236 aaPredicted RBP10.05□□□□□ -0.8
PCDHGC3-208ENST00000622836 RANP62826 216 aaKnown RBP10.05□□□□□ -0.8
PCDHGC3-208ENST00000622836 ZNF767PQ75MW2 155 aa10.05□□□□□ -0.8
PCDHGC3-208ENST00000622836 TMEM256Q8N2U0 113 aa10.05□□□□□ -0.8
PCDHGC3-208ENST00000622836 PSMG3Q9BT73 122 aaPredicted RBP10.05□□□□□ -0.8
PCDHGC3-208ENST00000622836 C11orf94C9JXX5 98 aa10.04□□□□□ -0.8
PCDHGC3-208ENST00000622836 HMGB3O15347 200 aaKnown RBP10.04□□□□□ -0.8
PCDHGC3-208ENST00000622836 MBP02144 154 aa10.04□□□□□ -0.8
PCDHGC3-208ENST00000622836 SERF2P84101 59 aa10.04□□□□□ -0.8
PCDHGC3-208ENST00000622836 ERCC8Q13216 396 aa10.04□□□□□ -0.8
PCDHGC3-208ENST00000622836 RPL7L1Q6DKI1 246 aaKnown RBP10.04□□□□□ -0.8
PCDHGC3-208ENST00000622836 PQLC2Q6ZP29 291 aa10.04□□□□□ -0.8
PCDHGC3-208ENST00000622836 Q6ZTC4 211 aa10.04□□□□□ -0.8
PCDHGC3-208ENST00000622836 OR2G3Q8NGZ4 309 aa10.04□□□□□ -0.8
PCDHGC3-208ENST00000622836 C2CD4CQ8TF44 421 aa10.04□□□□□ -0.8
PCDHGC3-208ENST00000622836 GNPNAT1Q96EK6 184 aaPredicted RBP10.04□□□□□ -0.8
PCDHGC3-208ENST00000622836 ZNF503Q96F45 646 aa10.04□□□□□ -0.8
PCDHGC3-208ENST00000622836 SH3BGRL3Q9H299 93 aa10.04□□□□□ -0.8
PCDHGC3-208ENST00000622836 YTHDF2Q9Y5A9 579 aaKnown RBP10.04□□□□□ -0.8
PCDHGC3-208ENST00000622836 IGKV2-40A0A087WW87 121 aaPredicted RBP10.03□□□□□ -0.8
PCDHGC3-208ENST00000622836 TRAV10A0A0B4J240 114 aa10.03□□□□□ -0.8
PCDHGC3-208ENST00000622836 TEX48A0A1B0GUV7 120 aa10.03□□□□□ -0.8
PCDHGC3-208ENST00000622836 G3V3Q6 166 aa10.03□□□□□ -0.8
PCDHGC3-208ENST00000622836 IGKV2D-40P01614 121 aaPredicted RBP10.03□□□□□ -0.8
PCDHGC3-208ENST00000622836 CT45A10P0DMU9 189 aa10.03□□□□□ -0.8
PCDHGC3-208ENST00000622836 TMEM78Q5T7P6 136 aa10.03□□□□□ -0.8
PCDHGC3-208ENST00000622836 LYPD1Q8N2G4 141 aa10.03□□□□□ -0.8
PCDHGC3-208ENST00000622836 ODF3Q96PU9 254 aa10.03□□□□□ -0.8
PCDHGC3-208ENST00000622836 Q9H3A6 140 aa10.03□□□□□ -0.8
PCDHGC3-208ENST00000622836 TAAR5O14804 337 aa10.02□□□□□ -0.81
PCDHGC3-208ENST00000622836 PRM2P04554 102 aa10.02□□□□□ -0.81
PCDHGC3-208ENST00000622836 TAS2R60P59551 318 aa10.02□□□□□ -0.81
PCDHGC3-208ENST00000622836 C12orf74Q32Q52 190 aa10.02□□□□□ -0.81
PCDHGC3-208ENST00000622836 FAM74A1Q5RGS3 127 aa10.02□□□□□ -0.81
PCDHGC3-208ENST00000622836 FAM222AQ5U5X8 452 aa10.02□□□□□ -0.81
PCDHGC3-208ENST00000622836 GFI1BQ5VTD9 330 aa10.02□□□□□ -0.81
PCDHGC3-208ENST00000622836 CMTM2Q8TAZ6 248 aa10.02□□□□□ -0.81
PCDHGC3-208ENST00000622836 HYLS1Q96M11 299 aa10.02□□□□□ -0.81
PCDHGC3-208ENST00000622836 LINC00477Q96M19 166 aa10.02□□□□□ -0.81
PCDHGC3-208ENST00000622836 C20orf144Q9BQM9 153 aa10.02□□□□□ -0.81
PCDHGC3-208ENST00000622836 DEFB131BA0A096LNP1 70 aa10.01□□□□□ -0.81
PCDHGC3-208ENST00000622836 IGLL5B9A064 214 aa10.01□□□□□ -0.81
PCDHGC3-208ENST00000622836 H7BYZ3 331 aa10.01□□□□□ -0.81
PCDHGC3-208ENST00000622836 ARL14EPLP0DKL9 152 aa10.01□□□□□ -0.81
PCDHGC3-208ENST00000622836 KIR3DS1Q14943 382 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms