RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 AP1S3Q96PC3 154 aa7.1□□□□□ -1.27
HDAC9-229ENST00000622668 SHANK2-AS3Q9BTD1 123 aa7.1□□□□□ -1.27
HDAC9-229ENST00000622668 TNRC18O15417 2968 aaPredicted RBP7.1□□□□□ -1.27
HDAC9-229ENST00000622668 IGLV2-23P01705 113 aa7.1□□□□□ -1.27
HDAC9-229ENST00000622668 BTF3P20290 206 aaKnown RBP7.1□□□□□ -1.27
HDAC9-229ENST00000622668 CFPP27918 469 aa7.1□□□□□ -1.27
HDAC9-229ENST00000622668 PDZD11Q5EBL8 140 aa7.1□□□□□ -1.27
HDAC9-229ENST00000622668 TCF23Q7RTU1 214 aa7.1□□□□□ -1.27
HDAC9-229ENST00000622668 UNC79Q9P2D8 2635 aa7.09□□□□□ -1.27
HDAC9-229ENST00000622668 TRBV20OR9-2A0A075B6H5 130 aa7.09□□□□□ -1.27
HDAC9-229ENST00000622668 TRAV8-1A0A0A6YYK1 113 aa7.09□□□□□ -1.27
HDAC9-229ENST00000622668 C2orf70A6NJV1 201 aa7.09□□□□□ -1.27
HDAC9-229ENST00000622668 TCAPO15273 167 aa7.09□□□□□ -1.27
HDAC9-229ENST00000622668 IGLC1P0CG04 106 aa7.09□□□□□ -1.27
HDAC9-229ENST00000622668 PAX9P55771 341 aa7.09□□□□□ -1.27
HDAC9-229ENST00000622668 TMEM61Q8N0U2 210 aa7.09□□□□□ -1.27
HDAC9-229ENST00000622668 PCP4L1A6NKN8 68 aa7.09□□□□□ -1.27
HDAC9-229ENST00000622668 TMEM190Q8WZ59 177 aa7.09□□□□□ -1.27
HDAC9-229ENST00000622668 RNF126Q9BV68 326 aa7.09□□□□□ -1.27
HDAC9-229ENST00000622668 KLK9Q9UKQ9 250 aa7.09□□□□□ -1.27
HDAC9-229ENST00000622668 H3BQ15 152 aa7.09□□□□□ -1.28
HDAC9-229ENST00000622668 AMBPP02760 352 aa7.09□□□□□ -1.28
HDAC9-229ENST00000622668 OR5AL1P0C617 328 aa7.09□□□□□ -1.28
HDAC9-229ENST00000622668 PARLQ9H300 379 aa7.09□□□□□ -1.28
HDAC9-229ENST00000622668 COL6A5A8TX70 2615 aa7.08□□□□□ -1.28
HDAC9-229ENST00000622668 RAB19A4D1S5 217 aa7.08□□□□□ -1.28
HDAC9-229ENST00000622668 FBLL1A6NHQ2 334 aaKnown RBP7.08□□□□□ -1.28
HDAC9-229ENST00000622668 VWC2LB2RUY7 222 aa7.08□□□□□ -1.28
HDAC9-229ENST00000622668 F6UB75 175 aa7.08□□□□□ -1.28
HDAC9-229ENST00000622668 ZNF253O75346 499 aa7.08□□□□□ -1.28
HDAC9-229ENST00000622668 SCGB1D1O95968 90 aa7.08□□□□□ -1.28
HDAC9-229ENST00000622668 WDR73Q6P4I2 378 aa7.08□□□□□ -1.28
HDAC9-229ENST00000622668 REC114Q7Z4M0 266 aa7.08□□□□□ -1.28
HDAC9-229ENST00000622668 FER1L6-AS1Q8NA97 138 aa7.08□□□□□ -1.28
HDAC9-229ENST00000622668 SEC11CQ9BY50 192 aa7.08□□□□□ -1.28
HDAC9-229ENST00000622668 IGHG4P01861 327 aa7.08□□□□□ -1.28
HDAC9-229ENST00000622668 ERCC8Q13216 396 aa7.08□□□□□ -1.28
HDAC9-229ENST00000622668 TMEM101Q96IK0 257 aa7.08□□□□□ -1.28
HDAC9-229ENST00000622668 FNDC4Q9H6D8 234 aaPredicted RBP7.08□□□□□ -1.28
HDAC9-229ENST00000622668 A0A1W2PRE2 83 aa7.08□□□□□ -1.28
HDAC9-229ENST00000622668 DEFB4AO15263 64 aa7.08□□□□□ -1.28
HDAC9-229ENST00000622668 TRBV12-3P01733 135 aa7.08□□□□□ -1.28
HDAC9-229ENST00000622668 CLLU1Q5K131 121 aa7.08□□□□□ -1.28
HDAC9-229ENST00000622668 ZNF491Q8N8L2 437 aa7.08□□□□□ -1.28
HDAC9-229ENST00000622668 C1orf194Q5T5A4 169 aa7.07□□□□□ -1.28
HDAC9-229ENST00000622668 FMC1Q96HJ9 113 aa7.07□□□□□ -1.28
HDAC9-229ENST00000622668 CSTL1Q9H114 145 aa7.07□□□□□ -1.28
HDAC9-229ENST00000622668 MS4A6AQ9H2W1 248 aa7.07□□□□□ -1.28
HDAC9-229ENST00000622668 NDUFA3O95167 84 aa7.07□□□□□ -1.28
HDAC9-229ENST00000622668 PRR31Q5SQ13 230 aa7.07□□□□□ -1.28
HDAC9-229ENST00000622668 OR8A1Q8NGG7 326 aa7.07□□□□□ -1.28
HDAC9-229ENST00000622668 ZNF502Q8TBZ5 544 aa7.07□□□□□ -1.28
HDAC9-229ENST00000622668 BPTFQ12830 3046 aa7.07□□□□□ -1.28
HDAC9-229ENST00000622668 DEFB125Q8N687 156 aa7.07□□□□□ -1.28
HDAC9-229ENST00000622668 TNRC6BQ9UPQ9 1833 aaKnown RBP7.07□□□□□ -1.28
HDAC9-229ENST00000622668 IGLV11-55A0A075B6I3 123 aa7.07□□□□□ -1.28
HDAC9-229ENST00000622668 FAM24BQ8N5W8 94 aa7.07□□□□□ -1.28
HDAC9-229ENST00000622668 ANAPC16Q96DE5 110 aa7.07□□□□□ -1.28
HDAC9-229ENST00000622668 SAV1Q9H4B6 383 aaPredicted RBP7.07□□□□□ -1.28
HDAC9-229ENST00000622668 VSIRQ9H7M9 311 aa7.07□□□□□ -1.28
HDAC9-229ENST00000622668 ARL2-SNX15V9GYD0 113 aa7.07□□□□□ -1.28
HDAC9-229ENST00000622668 TMEM89A2RUT3 159 aa7.06□□□□□ -1.28
HDAC9-229ENST00000622668 CGB3P0DN86 165 aa7.06□□□□□ -1.28
HDAC9-229ENST00000622668 CGB7P0DN87 165 aa7.06□□□□□ -1.28
HDAC9-229ENST00000622668 CDKN1BP46527 198 aa7.06□□□□□ -1.28
HDAC9-229ENST00000622668 FAM3BP58499 235 aaPredicted RBP7.06□□□□□ -1.28
HDAC9-229ENST00000622668 OR11H2Q8NH07 326 aa7.06□□□□□ -1.28
HDAC9-229ENST00000622668 ZFP30Q9Y2G7 519 aa7.06□□□□□ -1.28
HDAC9-229ENST00000622668 RNF222A6NCQ9 220 aa7.06□□□□□ -1.28
HDAC9-229ENST00000622668 RNF212Q495C1 297 aa7.06□□□□□ -1.28
HDAC9-229ENST00000622668 UQCC3Q6UW78 93 aa7.06□□□□□ -1.28
HDAC9-229ENST00000622668 ODF3L1Q8IXM7 274 aa7.06□□□□□ -1.28
HDAC9-229ENST00000622668 K7EIM0 57 aa7.06□□□□□ -1.28
HDAC9-229ENST00000622668 G0S2P27469 103 aa7.06□□□□□ -1.28
HDAC9-229ENST00000622668 RPL36AP83881 106 aaKnown RBP7.06□□□□□ -1.28
HDAC9-229ENST00000622668 ZNF876PQ49A33 203 aa7.06□□□□□ -1.28
HDAC9-229ENST00000622668 MYOZ3Q8TDC0 251 aa7.06□□□□□ -1.28
HDAC9-229ENST00000622668 RPL36ALQ969Q0 106 aaKnown RBP7.06□□□□□ -1.28
HDAC9-229ENST00000622668 Q6ZS46 218 aa7.05□□□□□ -1.28
HDAC9-229ENST00000622668 ZNF48Q96MX3 618 aaPredicted RBP7.05□□□□□ -1.28
HDAC9-229ENST00000622668 A0A096LPF7 62 aa7.05□□□□□ -1.28
HDAC9-229ENST00000622668 CTSGP08311 255 aa7.05□□□□□ -1.28
HDAC9-229ENST00000622668 DEFA6Q01524 100 aa7.05□□□□□ -1.28
HDAC9-229ENST00000622668 ISOC2Q96AB3 205 aa7.05□□□□□ -1.28
HDAC9-229ENST00000622668 PARD6GQ9BYG4 376 aaPredicted RBP7.05□□□□□ -1.28
HDAC9-229ENST00000622668 ZNF702PQ9H963 129 aa7.05□□□□□ -1.28
HDAC9-229ENST00000622668 SUMO2P61956 95 aaKnown RBP7.05□□□□□ -1.28
HDAC9-229ENST00000622668 DEFB104AQ8WTQ1 72 aa7.05□□□□□ -1.28
HDAC9-229ENST00000622668 FAM210AQ96ND0 272 aa7.05□□□□□ -1.28
HDAC9-229ENST00000622668 ESM1Q9NQ30 184 aa7.05□□□□□ -1.28
HDAC9-229ENST00000622668 IGHV3-16A0A0C4DH30 117 aa7.04□□□□□ -1.28
HDAC9-229ENST00000622668 A0A0J9YY99 117 aa7.04□□□□□ -1.28
HDAC9-229ENST00000622668 TCRAP04437 139 aa7.04□□□□□ -1.28
HDAC9-229ENST00000622668 STAG3L2P0CL84 134 aa7.04□□□□□ -1.28
HDAC9-229ENST00000622668 STAG3L3P0CL85 134 aa7.04□□□□□ -1.28
HDAC9-229ENST00000622668 ATP6V0BQ99437 205 aa7.04□□□□□ -1.28
HDAC9-229ENST00000622668 CRXO43186 299 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-229ENST00000622668 KRTDAPP60985 99 aa7.04□□□□□ -1.28
HDAC9-229ENST00000622668 GPHB5Q86YW7 130 aa7.04□□□□□ -1.28
HDAC9-229ENST00000622668 LINC00482Q8N8I6 264 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms