RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 XCL2Q9UBD3 114 aa15.29■□□□□ 0.04
PMPCA-212ENST00000622209 FRAS1Q86XX4 4008 aa15.28■□□□□ 0.04
PMPCA-212ENST00000622209 A0A1W2PPV4 95 aa15.28■□□□□ 0.04
PMPCA-212ENST00000622209 DEFB4AO15263 64 aa15.28■□□□□ 0.04
PMPCA-212ENST00000622209 MBP02144 154 aa15.28■□□□□ 0.04
PMPCA-212ENST00000622209 NBEAP1P0C6P0 100 aa15.28■□□□□ 0.04
PMPCA-212ENST00000622209 KHDC3LQ587J8 217 aa15.28■□□□□ 0.04
PMPCA-212ENST00000622209 OR10G4Q8NGN3 311 aa15.28■□□□□ 0.04
PMPCA-212ENST00000622209 OR10G9Q8NGN4 311 aa15.28■□□□□ 0.04
PMPCA-212ENST00000622209 OR10G7Q8NGN6 311 aa15.28■□□□□ 0.04
PMPCA-212ENST00000622209 C11orf45Q8TAV5 145 aa15.28■□□□□ 0.04
PMPCA-212ENST00000622209 RNF141Q8WVD5 230 aa15.28■□□□□ 0.04
PMPCA-212ENST00000622209 PRELID1Q9Y255 219 aa15.28■□□□□ 0.04
PMPCA-212ENST00000622209 DNAH10Q8IVF4 4471 aa15.27■□□□□ 0.04
PMPCA-212ENST00000622209 ZNF705EA8MWA4 302 aaPredicted RBP15.27■□□□□ 0.04
PMPCA-212ENST00000622209 OR7C2O60412 319 aa15.27■□□□□ 0.04
PMPCA-212ENST00000622209 NDUFB4O95168 129 aa15.27■□□□□ 0.04
PMPCA-212ENST00000622209 ZNF705DP0CH99 300 aaPredicted RBP15.27■□□□□ 0.04
PMPCA-212ENST00000622209 ZNF705BP0CI00 300 aaPredicted RBP15.27■□□□□ 0.04
PMPCA-212ENST00000622209 ZNF345Q14585 488 aa15.27■□□□□ 0.04
PMPCA-212ENST00000622209 AMTNQ6UX39 209 aa15.27■□□□□ 0.04
PMPCA-212ENST00000622209 BLNKQ8WV28 456 aa15.27■□□□□ 0.04
PMPCA-212ENST00000622209 FXYD5Q96DB9 178 aa15.27■□□□□ 0.04
PMPCA-212ENST00000622209 MRPL53Q96EL3 112 aaKnown RBP15.27■□□□□ 0.04
PMPCA-212ENST00000622209 SLC35B3Q9H1N7 401 aa15.27■□□□□ 0.04
PMPCA-212ENST00000622209 ZNF705FA8MVS1 300 aaPredicted RBP15.26■□□□□ 0.03
PMPCA-212ENST00000622209 AMBPP02760 352 aa15.26■□□□□ 0.03
PMPCA-212ENST00000622209 RAB2AP61019 212 aa15.26■□□□□ 0.03
PMPCA-212ENST00000622209 HIST1H1AQ02539 215 aaPredicted RBP15.26■□□□□ 0.03
PMPCA-212ENST00000622209 KCNRGQ8N5I3 272 aa15.26■□□□□ 0.03
PMPCA-212ENST00000622209 OR11H4Q8NGC9 324 aa15.26■□□□□ 0.03
PMPCA-212ENST00000622209 OR10J4P0C629 311 aa15.25■□□□□ 0.03
PMPCA-212ENST00000622209 FXYD7P58549 80 aa15.25■□□□□ 0.03
PMPCA-212ENST00000622209 FAM122CQ6P4D5 195 aa15.25■□□□□ 0.03
PMPCA-212ENST00000622209 OR10J6PQ8NGY7 276 aa15.25■□□□□ 0.03
PMPCA-212ENST00000622209 ZNF503Q96F45 646 aa15.25■□□□□ 0.03
PMPCA-212ENST00000622209 ST6GAL2Q96JF0 529 aa15.25■□□□□ 0.03
PMPCA-212ENST00000622209 AAMDCQ9H7C9 122 aa15.25■□□□□ 0.03
PMPCA-212ENST00000622209 A0A0D9SG52 128 aa15.24■□□□□ 0.03
PMPCA-212ENST00000622209 MIFP14174 115 aa15.24■□□□□ 0.03
PMPCA-212ENST00000622209 PQLC2Q6ZP29 291 aa15.24■□□□□ 0.03
PMPCA-212ENST00000622209 ARPC5LQ9BPX5 153 aa15.24■□□□□ 0.03
PMPCA-212ENST00000622209 SH3BGRL3Q9H299 93 aa15.24■□□□□ 0.03
PMPCA-212ENST00000622209 C11orf68Q9H3H3 251 aaKnown RBP15.24■□□□□ 0.03
PMPCA-212ENST00000622209 CYTL1Q9NRR1 136 aa15.24■□□□□ 0.03
PMPCA-212ENST00000622209 PRAC2D3DTV9 90 aa15.23■□□□□ 0.03
PMPCA-212ENST00000622209 UBE2L3P68036 154 aaKnown RBP15.23■□□□□ 0.03
PMPCA-212ENST00000622209 LGALS9CQ6DKI2 356 aa15.23■□□□□ 0.03
PMPCA-212ENST00000622209 LYPD1Q8N2G4 141 aa15.23■□□□□ 0.03
PMPCA-212ENST00000622209 PPP1R14DQ9NXH3 145 aa15.23■□□□□ 0.03
PMPCA-212ENST00000622209 X6R8D5 127 aa15.23■□□□□ 0.03
PMPCA-212ENST00000622209 VPS13DQ5THJ4 4388 aa15.22■□□□□ 0.03
PMPCA-212ENST00000622209 CDC34P49427 236 aaPredicted RBP15.22■□□□□ 0.03
PMPCA-212ENST00000622209 ZNF705AQ6ZN79 300 aaPredicted RBP15.22■□□□□ 0.03
PMPCA-212ENST00000622209 TCTE3Q8IZS6 198 aa15.22■□□□□ 0.03
PMPCA-212ENST00000622209 EXOC3-AS1Q8N2X6 119 aa15.22■□□□□ 0.03
PMPCA-212ENST00000622209 IGF2BP2-AS1Q96M15 143 aa15.22■□□□□ 0.03
PMPCA-212ENST00000622209 BOLA2-SMG1P6H3BVE0 249 aa15.21■□□□□ 0.03
PMPCA-212ENST00000622209 ICAM4Q14773 271 aa15.21■□□□□ 0.03
PMPCA-212ENST00000622209 Q8NAQ8 132 aa15.21■□□□□ 0.03
PMPCA-212ENST00000622209 NEU1Q99519 415 aa15.21■□□□□ 0.03
PMPCA-212ENST00000622209 GOLT1BQ9Y3E0 138 aa15.21■□□□□ 0.03
PMPCA-212ENST00000622209 SMIM9A6NGZ8 99 aa15.2■□□□□ 0.02
PMPCA-212ENST00000622209 M0R3E3 92 aa15.2■□□□□ 0.02
PMPCA-212ENST00000622209 STAG3L2P0CL84 134 aa15.2■□□□□ 0.02
PMPCA-212ENST00000622209 STAG3L3P0CL85 134 aa15.2■□□□□ 0.02
PMPCA-212ENST00000622209 PRB4P10163 310 aaPredicted RBP15.2■□□□□ 0.02
PMPCA-212ENST00000622209 SPINK13Q1W4C9 94 aa15.2■□□□□ 0.02
PMPCA-212ENST00000622209 PHYHIPLQ96FC7 376 aa15.2■□□□□ 0.02
PMPCA-212ENST00000622209 ACTR3CQ9C0K3 210 aaPredicted RBP15.2■□□□□ 0.02
PMPCA-212ENST00000622209 IGHV4-28A0A0C4DH34 117 aa15.19■□□□□ 0.02
PMPCA-212ENST00000622209 NPIPB6E9PJ23 425 aa15.19■□□□□ 0.02
PMPCA-212ENST00000622209 M0R2Z0 102 aa15.19■□□□□ 0.02
PMPCA-212ENST00000622209 EIF3GO75821 320 aaKnown RBP eCLIP15.19■□□□□ 0.02
PMPCA-212ENST00000622209 RANP62826 216 aaKnown RBP15.19■□□□□ 0.02
PMPCA-212ENST00000622209 C2CD4CQ8TF44 421 aa15.19■□□□□ 0.02
PMPCA-212ENST00000622209 RAB24Q969Q5 203 aa15.19■□□□□ 0.02
PMPCA-212ENST00000622209 KANTRA0A1W2PQU2 76 aa15.18■□□□□ 0.02
PMPCA-212ENST00000622209 HMGB3O15347 200 aaKnown RBP15.18■□□□□ 0.02
PMPCA-212ENST00000622209 CRXO43186 299 aaPredicted RBP15.18■□□□□ 0.02
PMPCA-212ENST00000622209 INSP01308 110 aa15.18■□□□□ 0.02
PMPCA-212ENST00000622209 TSPOP30536 169 aa15.18■□□□□ 0.02
PMPCA-212ENST00000622209 CDKN1BP46527 198 aa15.18■□□□□ 0.02
PMPCA-212ENST00000622209 C1orf158Q8N1D5 194 aa15.18■□□□□ 0.02
PMPCA-212ENST00000622209 LINC00477Q96M19 166 aa15.18■□□□□ 0.02
PMPCA-212ENST00000622209 ODF3Q96PU9 254 aa15.18■□□□□ 0.02
PMPCA-212ENST00000622209 Q9H3A6 140 aa15.18■□□□□ 0.02
PMPCA-212ENST00000622209 BCL2L11O43521 198 aa15.17■□□□□ 0.02
PMPCA-212ENST00000622209 RBMY1A1P0DJD3 496 aaKnown RBP15.17■□□□□ 0.02
PMPCA-212ENST00000622209 RBMY1CP0DJD4 496 aa15.17■□□□□ 0.02
PMPCA-212ENST00000622209 CSN1S1P47710 185 aa15.17■□□□□ 0.02
PMPCA-212ENST00000622209 RBMY1FQ15415 496 aaKnown RBP15.17■□□□□ 0.02
PMPCA-212ENST00000622209 AKR1C8PQ5T2L2 129 aa15.17■□□□□ 0.02
PMPCA-212ENST00000622209 hCG_2014768A0A024R1R8 64 aa15.16■□□□□ 0.02
PMPCA-212ENST00000622209 IGHV3OR16-12A0A075B7B8 117 aa15.16■□□□□ 0.02
PMPCA-212ENST00000622209 IGLL5B9A064 214 aa15.16■□□□□ 0.02
PMPCA-212ENST00000622209 CXorf1O96002 111 aa15.16■□□□□ 0.02
PMPCA-212ENST00000622209 ARL14EPLP0DKL9 152 aa15.16■□□□□ 0.02
PMPCA-212ENST00000622209 TMUB2Q71RG4 321 aa15.16■□□□□ 0.02
PMPCA-212ENST00000622209 SUN5Q8TC36 379 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms