RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 MT-ND6P03923 174 aa2.16□□□□□ -2.06
BRCA1-229ENST00000621897 TRGV3P03979 118 aa2.16□□□□□ -2.06
BRCA1-229ENST00000621897 MSMBP08118 114 aa2.16□□□□□ -2.06
BRCA1-229ENST00000621897 GZMBP10144 247 aa2.16□□□□□ -2.06
BRCA1-229ENST00000621897 CRYGAP11844 174 aa2.16□□□□□ -2.06
BRCA1-229ENST00000621897 CCL4P13236 92 aa2.16□□□□□ -2.06
BRCA1-229ENST00000621897 FOXA1P55317 472 aa2.16□□□□□ -2.06
BRCA1-229ENST00000621897 UBA52P62987 128 aaKnown RBP2.16□□□□□ -2.06
BRCA1-229ENST00000621897 KLRD1Q13241 179 aa2.16□□□□□ -2.06
BRCA1-229ENST00000621897 KISS1Q15726 138 aa2.16□□□□□ -2.06
BRCA1-229ENST00000621897 MIAQ16674 131 aa2.16□□□□□ -2.06
BRCA1-229ENST00000621897 UBE2SQ16763 222 aa2.16□□□□□ -2.06
BRCA1-229ENST00000621897 KRTAP13-2Q52LG2 175 aa2.16□□□□□ -2.06
BRCA1-229ENST00000621897 NOXRED1Q6NXP6 359 aa2.16□□□□□ -2.06
BRCA1-229ENST00000621897 ZNF322Q6U7Q0 402 aaPredicted RBP2.16□□□□□ -2.06
BRCA1-229ENST00000621897 SDIM1Q6ZPB5 146 aa2.16□□□□□ -2.06
BRCA1-229ENST00000621897 DYNAPQ8N1N2 210 aa2.16□□□□□ -2.06
BRCA1-229ENST00000621897 Q8N2B8 174 aa2.16□□□□□ -2.06
BRCA1-229ENST00000621897 SVBPQ8N300 66 aa2.16□□□□□ -2.06
BRCA1-229ENST00000621897 MIR7-3HGQ8N6C7 128 aa2.16□□□□□ -2.06
BRCA1-229ENST00000621897 RBPMSQ93062 196 aaKnown RBP2.16□□□□□ -2.06
BRCA1-229ENST00000621897 RAB37Q96AX2 223 aa2.16□□□□□ -2.06
BRCA1-229ENST00000621897 ZNF714Q96N38 554 aa2.16□□□□□ -2.06
BRCA1-229ENST00000621897 PKMYT1Q99640 499 aa2.16□□□□□ -2.06
BRCA1-229ENST00000621897 DPY30Q9C005 99 aa2.16□□□□□ -2.06
BRCA1-229ENST00000621897 ZNF355PQ9NSJ1 428 aa2.16□□□□□ -2.06
BRCA1-229ENST00000621897 MED9Q9NWA0 146 aa2.16□□□□□ -2.06
BRCA1-229ENST00000621897 LSM2Q9Y333 95 aaKnown RBP2.16□□□□□ -2.06
BRCA1-229ENST00000621897 TRAPPC1Q9Y5R8 145 aa2.16□□□□□ -2.06
BRCA1-229ENST00000621897 SERP1Q9Y6X1 66 aa2.16□□□□□ -2.06
BRCA1-229ENST00000621897 SPHKAPQ2M3C7 1700 aa2.16□□□□□ -2.06
BRCA1-229ENST00000621897 ZNF407Q9C0G0 2248 aa2.15□□□□□ -2.06
BRCA1-229ENST00000621897 FYCO1Q9BQS8 1478 aa2.15□□□□□ -2.06
BRCA1-229ENST00000621897 KIF20BQ96Q89 1820 aa2.15□□□□□ -2.06
BRCA1-229ENST00000621897 IGLV3-9A0A075B6K5 115 aa2.15□□□□□ -2.07
BRCA1-229ENST00000621897 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.15□□□□□ -2.07
BRCA1-229ENST00000621897 TRGV5A0A0B4J1U4 118 aa2.15□□□□□ -2.07
BRCA1-229ENST00000621897 A6NED7 52 aa2.15□□□□□ -2.07
BRCA1-229ENST00000621897 H3BMM0 161 aa2.15□□□□□ -2.07
BRCA1-229ENST00000621897 H3BT86 120 aa2.15□□□□□ -2.07
BRCA1-229ENST00000621897 APOC4-APOC2K7ER74 178 aa2.15□□□□□ -2.07
BRCA1-229ENST00000621897 M0R129 80 aa2.15□□□□□ -2.07
BRCA1-229ENST00000621897 PITX3O75364 302 aa2.15□□□□□ -2.07
BRCA1-229ENST00000621897 LY6HO94772 140 aa2.15□□□□□ -2.07
BRCA1-229ENST00000621897 APOC2P02655 101 aa2.15□□□□□ -2.07
BRCA1-229ENST00000621897 PMP2P02689 132 aa2.15□□□□□ -2.07
BRCA1-229ENST00000621897 CD3DP04234 171 aa2.15□□□□□ -2.07
BRCA1-229ENST00000621897 CTSDP07339 412 aaPredicted RBP2.15□□□□□ -2.07
BRCA1-229ENST00000621897 TPT1P13693 172 aaKnown RBP2.15□□□□□ -2.07
BRCA1-229ENST00000621897 CD24P25063 80 aa2.15□□□□□ -2.07
BRCA1-229ENST00000621897 FUSP35637 526 aaKnown RBP eCLIP2.15□□□□□ -2.07
BRCA1-229ENST00000621897 MPV17P39210 176 aa2.15□□□□□ -2.07
BRCA1-229ENST00000621897 Q6AWC8 147 aa2.15□□□□□ -2.07
BRCA1-229ENST00000621897 ZNF660Q6AZW8 331 aaPredicted RBP2.15□□□□□ -2.07
BRCA1-229ENST00000621897 SOSTDC1Q6X4U4 206 aa2.15□□□□□ -2.07
BRCA1-229ENST00000621897 Q6ZUT4 128 aa2.15□□□□□ -2.07
BRCA1-229ENST00000621897 HMGN2P46Q86SG4 172 aa2.15□□□□□ -2.07
BRCA1-229ENST00000621897 KRTAP13-1Q8IUC0 172 aa2.15□□□□□ -2.07
BRCA1-229ENST00000621897 RPRMLQ8N4K4 120 aa2.15□□□□□ -2.07
BRCA1-229ENST00000621897 SPANXA2-OT1Q8N9U9 137 aa2.15□□□□□ -2.07
BRCA1-229ENST00000621897 OR4X2Q8NGF9 303 aa2.15□□□□□ -2.07
BRCA1-229ENST00000621897 OTOSQ8NHW6 89 aa2.15□□□□□ -2.07
BRCA1-229ENST00000621897 MUC7Q8TAX7 377 aa2.15□□□□□ -2.07
BRCA1-229ENST00000621897 UBE2WQ96B02 151 aa2.15□□□□□ -2.07
BRCA1-229ENST00000621897 AQP10Q96PS8 301 aa2.15□□□□□ -2.07
BRCA1-229ENST00000621897 SMDT1Q9H4I9 107 aa2.15□□□□□ -2.07
BRCA1-229ENST00000621897 FKBP11Q9NYL4 201 aa2.15□□□□□ -2.07
BRCA1-229ENST00000621897 OR5V1Q9UGF6 321 aa2.15□□□□□ -2.07
BRCA1-229ENST00000621897 ZNF222Q9UK12 451 aa2.15□□□□□ -2.07
BRCA1-229ENST00000621897 RPL26L1Q9UNX3 145 aaKnown RBP2.15□□□□□ -2.07
BRCA1-229ENST00000621897 ARHGAP5Q13017 1502 aa2.15□□□□□ -2.07
BRCA1-229ENST00000621897 RTEL1-TNFRSF6BF6WH68 1400 aa2.15□□□□□ -2.07
BRCA1-229ENST00000621897 CPSF1Q10570 1443 aaKnown RBP2.15□□□□□ -2.07
BRCA1-229ENST00000621897 ZFC3H1O60293 1989 aaKnown RBP2.14□□□□□ -2.07
BRCA1-229ENST00000621897 IGLV2-18A0A075B6J9 118 aa2.14□□□□□ -2.07
BRCA1-229ENST00000621897 A0A0J9YW62 118 aa2.14□□□□□ -2.07
BRCA1-229ENST00000621897 MCRIP1C9JLW8 97 aa2.14□□□□□ -2.07
BRCA1-229ENST00000621897 M0R2P5 195 aa2.14□□□□□ -2.07
BRCA1-229ENST00000621897 SDCBPO00560 298 aaPredicted RBP2.14□□□□□ -2.07
BRCA1-229ENST00000621897 OR1I1O60431 355 aa2.14□□□□□ -2.07
BRCA1-229ENST00000621897 LHBP01229 141 aa2.14□□□□□ -2.07
BRCA1-229ENST00000621897 RBP4P02753 201 aa2.14□□□□□ -2.07
BRCA1-229ENST00000621897 NFYAP23511 347 aaPredicted RBP2.14□□□□□ -2.07
BRCA1-229ENST00000621897 MRPS36P82909 103 aaKnown RBP2.14□□□□□ -2.07
BRCA1-229ENST00000621897 ASB16-AS1Q495Z4 193 aa2.14□□□□□ -2.07
BRCA1-229ENST00000621897 CLLU1Q5K131 121 aa2.14□□□□□ -2.07
BRCA1-229ENST00000621897 C9orf153Q5TBE3 101 aa2.14□□□□□ -2.07
BRCA1-229ENST00000621897 LYZL2Q7Z4W2 148 aa2.14□□□□□ -2.07
BRCA1-229ENST00000621897 FAM216BQ8N7L0 139 aa2.14□□□□□ -2.07
BRCA1-229ENST00000621897 CCL4L1Q8NHW4 92 aa2.14□□□□□ -2.07
BRCA1-229ENST00000621897 FGF13Q92913 245 aa2.14□□□□□ -2.07
BRCA1-229ENST00000621897 RBMXL1Q96E39 390 aaKnown RBP2.14□□□□□ -2.07
BRCA1-229ENST00000621897 MRPS24Q96EL2 167 aaKnown RBP2.14□□□□□ -2.07
BRCA1-229ENST00000621897 LINC00467Q9BRT7 94 aa2.14□□□□□ -2.07
BRCA1-229ENST00000621897 LINC00574Q9H8X3 128 aa2.14□□□□□ -2.07
BRCA1-229ENST00000621897 ICOSQ9Y6W8 199 aa2.14□□□□□ -2.07
BRCA1-229ENST00000621897 MYH1P12882 1939 aa2.14□□□□□ -2.07
BRCA1-229ENST00000621897 RIC1Q4ADV7 1423 aa2.14□□□□□ -2.07
BRCA1-229ENST00000621897 TANC2Q9HCD6 1990 aa2.14□□□□□ -2.07
BRCA1-229ENST00000621897 NYNRINQ9P2P1 1898 aaKnown RBP2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms