RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 MLST8Q9BVC4 326 aa16.37■□□□□ 0.21
SPAST-204ENST00000621856 RHPN1-AS1Q9BWJ2 59 aa16.37■□□□□ 0.21
SPAST-204ENST00000621856 BIN3Q9NQY0 253 aa16.37■□□□□ 0.21
SPAST-204ENST00000621856 IGKV2-40A0A087WW87 121 aaPredicted RBP16.36■□□□□ 0.21
SPAST-204ENST00000621856 IGKV2D-40P01614 121 aaPredicted RBP16.36■□□□□ 0.21
SPAST-204ENST00000621856 KHDC1LQ5JSQ8 128 aa16.36■□□□□ 0.21
SPAST-204ENST00000621856 TMEM183AQ8IXX5 376 aa16.36■□□□□ 0.21
SPAST-204ENST00000621856 ZFP82Q8N141 532 aa16.36■□□□□ 0.21
SPAST-204ENST00000621856 PYGO2Q9BRQ0 406 aa16.36■□□□□ 0.21
SPAST-204ENST00000621856 SMPXQ9UHP9 88 aa16.36■□□□□ 0.21
SPAST-204ENST00000621856 ZNF705GA8MUZ8 300 aaPredicted RBP16.36■□□□□ 0.21
SPAST-204ENST00000621856 FOXL1Q12952 345 aa16.36■□□□□ 0.21
SPAST-204ENST00000621856 LCN12Q6JVE5 192 aa16.36■□□□□ 0.21
SPAST-204ENST00000621856 FAM231DQ6ZW35 169 aa16.36■□□□□ 0.21
SPAST-204ENST00000621856 RNF182Q8N6D2 247 aa16.36■□□□□ 0.21
SPAST-204ENST00000621856 NOTCH2Q04721 2471 aa16.35■□□□□ 0.21
SPAST-204ENST00000621856 ZNF705FA8MVS1 300 aaPredicted RBP16.35■□□□□ 0.21
SPAST-204ENST00000621856 GATCO43716 136 aaKnown RBP16.35■□□□□ 0.21
SPAST-204ENST00000621856 HILS1P60008 231 aa16.35■□□□□ 0.21
SPAST-204ENST00000621856 C16orf92Q96LL3 132 aa16.35■□□□□ 0.21
SPAST-204ENST00000621856 ZFP30Q9Y2G7 519 aa16.35■□□□□ 0.21
SPAST-204ENST00000621856 RPL11P62913 178 aaKnown RBP16.34■□□□□ 0.21
SPAST-204ENST00000621856 NUDT10Q8NFP7 164 aa16.34■□□□□ 0.21
SPAST-204ENST00000621856 NUDT11Q96G61 164 aa16.34■□□□□ 0.21
SPAST-204ENST00000621856 ANK3Q12955 4377 aaKnown RBP16.34■□□□□ 0.21
SPAST-204ENST00000621856 TRAV8-2A0A0B4J237 113 aa16.33■□□□□ 0.21
SPAST-204ENST00000621856 BMI1P35226 326 aa16.33■□□□□ 0.21
SPAST-204ENST00000621856 CDX1P47902 265 aaPredicted RBP16.33■□□□□ 0.21
SPAST-204ENST00000621856 C18orf65Q6ZTR6 163 aa16.33■□□□□ 0.21
SPAST-204ENST00000621856 Q71RC1 249 aaPredicted RBP16.33■□□□□ 0.21
SPAST-204ENST00000621856 BTF3L4Q96K17 158 aa16.33■□□□□ 0.21
SPAST-204ENST00000621856 ASCL2Q99929 193 aa16.33■□□□□ 0.21
SPAST-204ENST00000621856 HOXD3P31249 432 aaPredicted RBP16.33■□□□□ 0.2
SPAST-204ENST00000621856 SYNJ2BPP57105 145 aa16.33■□□□□ 0.2
SPAST-204ENST00000621856 TCTEX1D4Q5JR98 221 aa16.33■□□□□ 0.2
SPAST-204ENST00000621856 REC114Q7Z4M0 266 aa16.33■□□□□ 0.2
SPAST-204ENST00000621856 DAZAP1Q96EP5 407 aaKnown RBP16.33■□□□□ 0.2
SPAST-204ENST00000621856 ZNF492Q9P255 531 aa16.33■□□□□ 0.2
SPAST-204ENST00000621856 FBLL1A6NHQ2 334 aaKnown RBP16.32■□□□□ 0.2
SPAST-204ENST00000621856 EDN2P20800 178 aa16.32■□□□□ 0.2
SPAST-204ENST00000621856 GBGT1Q8N5D6 347 aa16.32■□□□□ 0.2
SPAST-204ENST00000621856 JMJD8Q96S16 334 aa16.32■□□□□ 0.2
SPAST-204ENST00000621856 SRD5A3Q9H8P0 318 aa16.32■□□□□ 0.2
SPAST-204ENST00000621856 HIVEP2P31629 2446 aa16.32■□□□□ 0.2
SPAST-204ENST00000621856 C4orf3Q8WVX3 66 aa16.31■□□□□ 0.2
SPAST-204ENST00000621856 MRPL53Q96EL3 112 aaKnown RBP16.31■□□□□ 0.2
SPAST-204ENST00000621856 CLEC5AQ9NY25 188 aa16.31■□□□□ 0.2
SPAST-204ENST00000621856 TRAV9-1A0A075B6T8 112 aa16.31■□□□□ 0.2
SPAST-204ENST00000621856 TMEM213A2RRL7 107 aa16.31■□□□□ 0.2
SPAST-204ENST00000621856 LGALS9O00182 355 aa16.31■□□□□ 0.2
SPAST-204ENST00000621856 DEFB136Q30KP8 78 aa16.31■□□□□ 0.2
SPAST-204ENST00000621856 LINC00322Q6ZN03 302 aaPredicted RBP16.31■□□□□ 0.2
SPAST-204ENST00000621856 VGLL1Q99990 258 aa16.31■□□□□ 0.2
SPAST-204ENST00000621856 C16orf95Q9H693 158 aa16.31■□□□□ 0.2
SPAST-204ENST00000621856 PRAC2D3DTV9 90 aa16.3■□□□□ 0.2
SPAST-204ENST00000621856 P01737 135 aa16.3■□□□□ 0.2
SPAST-204ENST00000621856 TRGC2P03986 189 aa16.3■□□□□ 0.2
SPAST-204ENST00000621856 TCL1AP56279 114 aa16.3■□□□□ 0.2
SPAST-204ENST00000621856 TCF24Q7RTU0 167 aa16.3■□□□□ 0.2
SPAST-204ENST00000621856 KLHL30-AS1Q8NEE0 82 aa16.3■□□□□ 0.2
SPAST-204ENST00000621856 DPF1Q92782 380 aa16.3■□□□□ 0.2
SPAST-204ENST00000621856 ZC2HC1AQ96GY0 325 aa16.3■□□□□ 0.2
SPAST-204ENST00000621856 NRN1Q9NPD7 142 aa16.3■□□□□ 0.2
SPAST-204ENST00000621856 SELENOKQ9Y6D0 94 aa16.3■□□□□ 0.2
SPAST-204ENST00000621856 IGKV3-7A0A075B6H7 116 aa16.29■□□□□ 0.2
SPAST-204ENST00000621856 LOC105371267A0A1B0GV96 52 aa16.29■□□□□ 0.2
SPAST-204ENST00000621856 A8MWP6 167 aa16.29■□□□□ 0.2
SPAST-204ENST00000621856 LINC01619G3V211 115 aa16.29■□□□□ 0.2
SPAST-204ENST00000621856 CA1P00915 261 aaPredicted RBP16.29■□□□□ 0.2
SPAST-204ENST00000621856 TYMSP04818 313 aa16.29■□□□□ 0.2
SPAST-204ENST00000621856 C19orf71A6NCJ1 209 aa16.28■□□□□ 0.2
SPAST-204ENST00000621856 INAFM1C9JVW0 142 aa16.28■□□□□ 0.2
SPAST-204ENST00000621856 FOSL1P15407 271 aa16.28■□□□□ 0.2
SPAST-204ENST00000621856 C8orf49Q96NF6 230 aa16.28■□□□□ 0.2
SPAST-204ENST00000621856 RPP21Q9H633 154 aaKnown RBP16.28■□□□□ 0.2
SPAST-204ENST00000621856 SMIM27A0A1W2PRY6 76 aa16.28■□□□□ 0.2
SPAST-204ENST00000621856 RBAKDNA6NC62 111 aa16.28■□□□□ 0.2
SPAST-204ENST00000621856 CT45A10P0DMU9 189 aa16.28■□□□□ 0.2
SPAST-204ENST00000621856 SLURP1P55000 103 aa16.28■□□□□ 0.2
SPAST-204ENST00000621856 ERCC8Q13216 396 aa16.28■□□□□ 0.2
SPAST-204ENST00000621856 SAPCD1Q5SSQ6 148 aa16.28■□□□□ 0.2
SPAST-204ENST00000621856 LINC01006Q8NI28 216 aa16.28■□□□□ 0.2
SPAST-204ENST00000621856 Q8TAT8 98 aa16.28■□□□□ 0.2
SPAST-204ENST00000621856 WIPF2Q8TF74 440 aaPredicted RBP16.28■□□□□ 0.2
SPAST-204ENST00000621856 OTOGQ6ZRI0 2925 aa16.27■□□□□ 0.2
SPAST-204ENST00000621856 MTORP42345 2549 aa16.27■□□□□ 0.19
SPAST-204ENST00000621856 SOCS3O14543 225 aa16.27■□□□□ 0.19
SPAST-204ENST00000621856 KLF5Q13887 457 aaPredicted RBP16.27■□□□□ 0.19
SPAST-204ENST00000621856 ZNF738Q8NE65 137 aa16.27■□□□□ 0.19
SPAST-204ENST00000621856 OR11H1Q8NG94 326 aa16.27■□□□□ 0.19
SPAST-204ENST00000621856 OR1N2Q8NGR9 330 aa16.27■□□□□ 0.19
SPAST-204ENST00000621856 NDFIP1Q9BT67 221 aa16.27■□□□□ 0.19
SPAST-204ENST00000621856 HIST2H2BDQ6DRA6 164 aa16.26■□□□□ 0.19
SPAST-204ENST00000621856 C11orf44Q8N8P7 122 aa16.26■□□□□ 0.19
SPAST-204ENST00000621856 C20orf173Q96LM9 149 aa16.26■□□□□ 0.19
SPAST-204ENST00000621856 PRR25Q96S07 402 aa16.26■□□□□ 0.19
SPAST-204ENST00000621856 RPL19P84098 196 aaKnown RBP16.25■□□□□ 0.19
SPAST-204ENST00000621856 DUX3Q96PT4 197 aa16.25■□□□□ 0.19
SPAST-204ENST00000621856 HAX1O00165 279 aa16.25■□□□□ 0.19
SPAST-204ENST00000621856 CD28P10747 220 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms