RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 TRAV5A0A0B4J249 113 aa16.91■□□□□ 0.3
ATXN3-253ENST00000621269 UBE2L5PA0A1B0GUS4 154 aa16.91■□□□□ 0.3
ATXN3-253ENST00000621269 A0A1B0GVY2 172 aa16.91■□□□□ 0.3
ATXN3-253ENST00000621269 PRAC2D3DTV9 90 aa16.91■□□□□ 0.3
ATXN3-253ENST00000621269 H3BQ15 152 aa16.91■□□□□ 0.3
ATXN3-253ENST00000621269 FAM3BP58499 235 aaPredicted RBP16.91■□□□□ 0.3
ATXN3-253ENST00000621269 Q6ZR54 194 aa16.91■□□□□ 0.3
ATXN3-253ENST00000621269 SAT2Q96F10 170 aaPredicted RBP16.91■□□□□ 0.3
ATXN3-253ENST00000621269 RPL29P47914 159 aaKnown RBP16.9■□□□□ 0.3
ATXN3-253ENST00000621269 RAB32Q13637 225 aa16.9■□□□□ 0.3
ATXN3-253ENST00000621269 SOHLH1Q5JUK2 328 aa16.9■□□□□ 0.3
ATXN3-253ENST00000621269 TMEM252Q8N6L7 170 aa16.9■□□□□ 0.3
ATXN3-253ENST00000621269 TMEM263Q8WUH6 116 aaKnown RBP16.9■□□□□ 0.3
ATXN3-253ENST00000621269 SLC39A9Q9NUM3 307 aa16.9■□□□□ 0.3
ATXN3-253ENST00000621269 IGSF23A1L1A6 192 aa16.89■□□□□ 0.29
ATXN3-253ENST00000621269 CCDC28AQ8IWP9 274 aa16.89■□□□□ 0.29
ATXN3-253ENST00000621269 PARD6GQ9BYG4 376 aaPredicted RBP16.89■□□□□ 0.29
ATXN3-253ENST00000621269 NOP10Q9NPE3 64 aaKnown RBP16.89■□□□□ 0.29
ATXN3-253ENST00000621269 NUDT3O95989 172 aa16.88■□□□□ 0.29
ATXN3-253ENST00000621269 IL15RAQ13261 267 aa16.88■□□□□ 0.29
ATXN3-253ENST00000621269 KIR3DS1Q14943 382 aa16.88■□□□□ 0.29
ATXN3-253ENST00000621269 ATP6V1FQ16864 119 aa16.88■□□□□ 0.29
ATXN3-253ENST00000621269 RNASE8Q8TDE3 154 aaKnown RBP16.88■□□□□ 0.29
ATXN3-253ENST00000621269 HERC2O95714 4834 aa16.87■□□□□ 0.29
ATXN3-253ENST00000621269 FGF7P21781 194 aa16.87■□□□□ 0.29
ATXN3-253ENST00000621269 LEPP41159 167 aa16.87■□□□□ 0.29
ATXN3-253ENST00000621269 GFI1BQ5VTD9 330 aa16.87■□□□□ 0.29
ATXN3-253ENST00000621269 LINC00299Q6ZSB3 139 aa16.87■□□□□ 0.29
ATXN3-253ENST00000621269 CHAC2Q8WUX2 184 aa16.87■□□□□ 0.29
ATXN3-253ENST00000621269 S100ZQ8WXG8 99 aa16.87■□□□□ 0.29
ATXN3-253ENST00000621269 GPN1Q9HCN4 374 aaPredicted RBP16.87■□□□□ 0.29
ATXN3-253ENST00000621269 ZNF586Q9NXT0 402 aa16.86■□□□□ 0.29
ATXN3-253ENST00000621269 NPIPB6E9PJ23 425 aa16.85■□□□□ 0.29
ATXN3-253ENST00000621269 J3KRW8 73 aa16.85■□□□□ 0.29
ATXN3-253ENST00000621269 ZNF253O75346 499 aa16.85■□□□□ 0.29
ATXN3-253ENST00000621269 CT45A10P0DMU9 189 aa16.85■□□□□ 0.29
ATXN3-253ENST00000621269 ASAH1Q13510 395 aa16.85■□□□□ 0.29
ATXN3-253ENST00000621269 C1orf134Q5TEV5 83 aa16.85■□□□□ 0.29
ATXN3-253ENST00000621269 ODF3Q96PU9 254 aa16.85■□□□□ 0.29
ATXN3-253ENST00000621269 DNAH2Q9P225 4427 aa16.84■□□□□ 0.29
ATXN3-253ENST00000621269 MPDU1O75352 247 aa16.84■□□□□ 0.29
ATXN3-253ENST00000621269 TMEM14CQ9P0S9 112 aa16.84■□□□□ 0.29
ATXN3-253ENST00000621269 TIMM9Q9Y5J7 89 aa16.84■□□□□ 0.29
ATXN3-253ENST00000621269 TRBV19A0A075B6N1 114 aa16.83■□□□□ 0.28
ATXN3-253ENST00000621269 TRAV12-3A0A0B4J271 114 aa16.83■□□□□ 0.28
ATXN3-253ENST00000621269 CCL18P55774 89 aa16.83■□□□□ 0.28
ATXN3-253ENST00000621269 ENKURQ8TC29 256 aa16.83■□□□□ 0.28
ATXN3-253ENST00000621269 MRPL53Q96EL3 112 aaKnown RBP16.83■□□□□ 0.28
ATXN3-253ENST00000621269 SNURFLB1AK76 121 aa16.82■□□□□ 0.28
ATXN3-253ENST00000621269 RLN2P04090 185 aa16.82■□□□□ 0.28
ATXN3-253ENST00000621269 HIST1H1EP10412 219 aaKnown RBP16.82■□□□□ 0.28
ATXN3-253ENST00000621269 NPCDR1Q9BY65 106 aa16.82■□□□□ 0.28
ATXN3-253ENST00000621269 FAT2Q9NYQ8 4349 aa16.82■□□□□ 0.28
ATXN3-253ENST00000621269 OR5I1Q13606 314 aa16.81■□□□□ 0.28
ATXN3-253ENST00000621269 CLINT1Q14677 625 aa16.81■□□□□ 0.28
ATXN3-253ENST00000621269 RNF141Q8WVD5 230 aa16.81■□□□□ 0.28
ATXN3-253ENST00000621269 PRELID1Q9Y255 219 aa16.81■□□□□ 0.28
ATXN3-253ENST00000621269 NHLH2Q02577 135 aa16.8■□□□□ 0.28
ATXN3-253ENST00000621269 BLNKQ8WV28 456 aa16.8■□□□□ 0.28
ATXN3-253ENST00000621269 PYGO2Q9BRQ0 406 aa16.8■□□□□ 0.28
ATXN3-253ENST00000621269 KRTAP17-1Q9BYP8 105 aa16.8■□□□□ 0.28
ATXN3-253ENST00000621269 SLC25A31Q9H0C2 315 aa16.8■□□□□ 0.28
ATXN3-253ENST00000621269 DNAH17Q9UFH2 4485 aa16.79■□□□□ 0.28
ATXN3-253ENST00000621269 GAGE12BA1L429 117 aa16.79■□□□□ 0.28
ATXN3-253ENST00000621269 M0R3E3 92 aa16.79■□□□□ 0.28
ATXN3-253ENST00000621269 GAGE7O76087 117 aa16.79■□□□□ 0.28
ATXN3-253ENST00000621269 GAGE12FP0CL80 117 aa16.79■□□□□ 0.28
ATXN3-253ENST00000621269 GAGE12GP0CL81 117 aa16.79■□□□□ 0.28
ATXN3-253ENST00000621269 GAGE12IP0CL82 117 aa16.79■□□□□ 0.28
ATXN3-253ENST00000621269 PYYP10082 97 aa16.79■□□□□ 0.28
ATXN3-253ENST00000621269 PDE6HQ13956 83 aa16.79■□□□□ 0.28
ATXN3-253ENST00000621269 LINC00612Q8N6U2 182 aa16.79■□□□□ 0.28
ATXN3-253ENST00000621269 OR5C1Q8NGR4 320 aa16.79■□□□□ 0.28
ATXN3-253ENST00000621269 ZNRF2Q8NHG8 242 aa16.79■□□□□ 0.28
ATXN3-253ENST00000621269 THAP6Q8TBB0 222 aa16.79■□□□□ 0.28
ATXN3-253ENST00000621269 E5RGE8 158 aa16.78■□□□□ 0.28
ATXN3-253ENST00000621269 NDUFB4O95168 129 aa16.78■□□□□ 0.28
ATXN3-253ENST00000621269 SIX6O95475 246 aa16.78■□□□□ 0.28
ATXN3-253ENST00000621269 SLC25A5P05141 298 aaKnown RBP16.78■□□□□ 0.28
ATXN3-253ENST00000621269 MED14OSP0DP75 135 aa16.78■□□□□ 0.28
ATXN3-253ENST00000621269 ERCC8Q13216 396 aa16.78■□□□□ 0.28
ATXN3-253ENST00000621269 GCSAMLQ5JQS6 135 aa16.78■□□□□ 0.28
ATXN3-253ENST00000621269 GNPNAT1Q96EK6 184 aaPredicted RBP16.78■□□□□ 0.28
ATXN3-253ENST00000621269 LINC00477Q96M19 166 aa16.78■□□□□ 0.28
ATXN3-253ENST00000621269 AAMDCQ9H7C9 122 aa16.78■□□□□ 0.28
ATXN3-253ENST00000621269 TRAV26-1A0A087WT03 109 aa16.77■□□□□ 0.28
ATXN3-253ENST00000621269 NBDYA0A0U1RRE5 68 aa16.77■□□□□ 0.28
ATXN3-253ENST00000621269 LRRC37A5PQ49AS3 106 aa16.77■□□□□ 0.28
ATXN3-253ENST00000621269 NMES1Q9C002 83 aa16.77■□□□□ 0.28
ATXN3-253ENST00000621269 LINC00588Q9Y4M8 146 aa16.77■□□□□ 0.28
ATXN3-253ENST00000621269 KIAA1109Q2LD37 5005 aa16.77■□□□□ 0.28
ATXN3-253ENST00000621269 NACAE9PAV3 2078 aa16.76■□□□□ 0.27
ATXN3-253ENST00000621269 C7orf71A4D174 169 aa16.76■□□□□ 0.27
ATXN3-253ENST00000621269 UPK1BO75841 260 aa16.76■□□□□ 0.27
ATXN3-253ENST00000621269 M6PRP20645 277 aa16.76■□□□□ 0.27
ATXN3-253ENST00000621269 EXOC3-AS1Q8N2X6 119 aa16.76■□□□□ 0.27
ATXN3-253ENST00000621269 SLC25A2Q9BXI2 301 aa16.76■□□□□ 0.27
ATXN3-253ENST00000621269 OR5AC2Q9NZP5 309 aa16.76■□□□□ 0.27
ATXN3-253ENST00000621269 PRAF2O60831 178 aa16.75■□□□□ 0.27
ATXN3-253ENST00000621269 CYCSP99999 105 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms