RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 NAA38Q9BRA0 125 aaKnown RBP15.33■□□□□ 0.04
PDLIM3-212ENST00000620787 JKAMPQ9P055 326 aa15.33■□□□□ 0.04
PDLIM3-212ENST00000620787 KLF17Q5JT82 389 aaPredicted RBP15.33■□□□□ 0.04
PDLIM3-212ENST00000620787 OR4X2Q8NGF9 303 aa15.33■□□□□ 0.04
PDLIM3-212ENST00000620787 IGKV2-40A0A087WW87 121 aaPredicted RBP15.32■□□□□ 0.04
PDLIM3-212ENST00000620787 TIMM23O14925 209 aa15.32■□□□□ 0.04
PDLIM3-212ENST00000620787 IGKV2D-40P01614 121 aaPredicted RBP15.32■□□□□ 0.04
PDLIM3-212ENST00000620787 PCP2Q8IVA1 136 aa15.32■□□□□ 0.04
PDLIM3-212ENST00000620787 A0A0G2JLM5 398 aa15.32■□□□□ 0.04
PDLIM3-212ENST00000620787 NDUFS7O75251 213 aa15.32■□□□□ 0.04
PDLIM3-212ENST00000620787 GFRALQ6UXV0 394 aa15.32■□□□□ 0.04
PDLIM3-212ENST00000620787 ABHD17AQ96GS6 310 aa15.32■□□□□ 0.04
PDLIM3-212ENST00000620787 RAB1BQ9H0U4 201 aa15.32■□□□□ 0.04
PDLIM3-212ENST00000620787 LYNX1G3V0Z9 82 aa15.31■□□□□ 0.04
PDLIM3-212ENST00000620787 LYNX1P0DP58 116 aa15.31■□□□□ 0.04
PDLIM3-212ENST00000620787 EGR2P11161 476 aaPredicted RBP15.31■□□□□ 0.04
PDLIM3-212ENST00000620787 CKS2P33552 79 aa15.31■□□□□ 0.04
PDLIM3-212ENST00000620787 ADGRG4Q8IZF6 3080 aa15.31■□□□□ 0.04
PDLIM3-212ENST00000620787 PPIAL4CA0A0B4J2A2 164 aa15.31■□□□□ 0.04
PDLIM3-212ENST00000620787 PRRG2O14669 202 aa15.31■□□□□ 0.04
PDLIM3-212ENST00000620787 PPIAL4GP0DN37 164 aa15.31■□□□□ 0.04
PDLIM3-212ENST00000620787 PRR25Q96S07 402 aa15.31■□□□□ 0.04
PDLIM3-212ENST00000620787 SELENOKQ9Y6D0 94 aa15.31■□□□□ 0.04
PDLIM3-212ENST00000620787 GNG7O60262 68 aa15.3■□□□□ 0.04
PDLIM3-212ENST00000620787 PRSS57Q6UWY2 283 aa15.3■□□□□ 0.04
PDLIM3-212ENST00000620787 NPFFR1Q9GZQ6 430 aa15.3■□□□□ 0.04
PDLIM3-212ENST00000620787 DKK2Q9UBU2 259 aa15.3■□□□□ 0.04
PDLIM3-212ENST00000620787 SH3BGRL2Q9UJC5 107 aa15.3■□□□□ 0.04
PDLIM3-212ENST00000620787 CNOT1A5YKK6 2376 aaKnown RBP15.3■□□□□ 0.04
PDLIM3-212ENST00000620787 OTOGLQ3ZCN5 2332 aa15.3■□□□□ 0.04
PDLIM3-212ENST00000620787 A0A1W2PRD5 423 aa15.29■□□□□ 0.04
PDLIM3-212ENST00000620787 A0A1W2PRF3 423 aa15.29■□□□□ 0.04
PDLIM3-212ENST00000620787 A0A1W2PRM7 423 aa15.29■□□□□ 0.04
PDLIM3-212ENST00000620787 NMUP48645 174 aa15.29■□□□□ 0.04
PDLIM3-212ENST00000620787 TWIST1Q15672 202 aa15.29■□□□□ 0.04
PDLIM3-212ENST00000620787 ZNF575Q86XF7 245 aa15.29■□□□□ 0.04
PDLIM3-212ENST00000620787 NBR2O15453 112 aa15.29■□□□□ 0.04
PDLIM3-212ENST00000620787 IGLC6P0CF74 106 aa15.29■□□□□ 0.04
PDLIM3-212ENST00000620787 ZNF80P51504 273 aaPredicted RBP15.29■□□□□ 0.04
PDLIM3-212ENST00000620787 OR2K2Q8NGT1 345 aa15.29■□□□□ 0.04
PDLIM3-212ENST00000620787 F8W735 103 aaPredicted RBP15.28■□□□□ 0.04
PDLIM3-212ENST00000620787 S100A7AQ86SG5 101 aa15.28■□□□□ 0.04
PDLIM3-212ENST00000620787 WFDC3Q8IUB2 231 aa15.28■□□□□ 0.04
PDLIM3-212ENST00000620787 RAB37Q96AX2 223 aa15.28■□□□□ 0.04
PDLIM3-212ENST00000620787 FANCD2OSQ96PS1 177 aa15.28■□□□□ 0.04
PDLIM3-212ENST00000620787 COL25A1Q9BXS0 654 aaPredicted RBP15.28■□□□□ 0.04
PDLIM3-212ENST00000620787 Q8TAT8 98 aa15.28■□□□□ 0.04
PDLIM3-212ENST00000620787 DMXL1Q9Y485 3027 aa15.28■□□□□ 0.04
PDLIM3-212ENST00000620787 IGFBPL1Q8WX77 278 aa15.27■□□□□ 0.04
PDLIM3-212ENST00000620787 PSMG3-AS1Q96PY0 264 aa15.27■□□□□ 0.04
PDLIM3-212ENST00000620787 EP300Q09472 2414 aaPredicted RBP15.27■□□□□ 0.04
PDLIM3-212ENST00000620787 CACNA1HO95180 2353 aa15.27■□□□□ 0.04
PDLIM3-212ENST00000620787 IGLV11-55A0A075B6I3 123 aa15.27■□□□□ 0.03
PDLIM3-212ENST00000620787 G3V4G9 280 aa15.27■□□□□ 0.03
PDLIM3-212ENST00000620787 CFHR4Q92496 578 aa15.27■□□□□ 0.03
PDLIM3-212ENST00000620787 RNF185Q96GF1 192 aa15.27■□□□□ 0.03
PDLIM3-212ENST00000620787 ZNF48Q96MX3 618 aaPredicted RBP15.27■□□□□ 0.03
PDLIM3-212ENST00000620787 TACC2O95359 2948 aa15.26■□□□□ 0.03
PDLIM3-212ENST00000620787 A0A1W2PPM0 123 aa15.26■□□□□ 0.03
PDLIM3-212ENST00000620787 LINC01546A6NGU7 62 aa15.26■□□□□ 0.03
PDLIM3-212ENST00000620787 NDUFA3O95167 84 aa15.26■□□□□ 0.03
PDLIM3-212ENST00000620787 MFAP4P55083 255 aa15.26■□□□□ 0.03
PDLIM3-212ENST00000620787 VGLL1Q99990 258 aa15.26■□□□□ 0.03
PDLIM3-212ENST00000620787 BSNQ9UPA5 3926 aa15.26■□□□□ 0.03
PDLIM3-212ENST00000620787 RIPPLY3P57055 190 aa15.26■□□□□ 0.03
PDLIM3-212ENST00000620787 NEGR1Q7Z3B1 354 aa15.26■□□□□ 0.03
PDLIM3-212ENST00000620787 NPBQ8NG41 125 aa15.26■□□□□ 0.03
PDLIM3-212ENST00000620787 PIFOQ8TCI5 191 aa15.26■□□□□ 0.03
PDLIM3-212ENST00000620787 MAP1BP46821 2468 aaKnown RBP15.25■□□□□ 0.03
PDLIM3-212ENST00000620787 NPIPB5A8MRT5 1133 aa15.25■□□□□ 0.03
PDLIM3-212ENST00000620787 C18orf15Q96N68 181 aa15.25■□□□□ 0.03
PDLIM3-212ENST00000620787 MSRB1Q9NZV6 116 aa15.25■□□□□ 0.03
PDLIM3-212ENST00000620787 ONECUT1Q9UBC0 465 aa15.25■□□□□ 0.03
PDLIM3-212ENST00000620787 B9A039 149 aa15.25■□□□□ 0.03
PDLIM3-212ENST00000620787 GAS8-AS1O95177 125 aa15.25■□□□□ 0.03
PDLIM3-212ENST00000620787 IGHG4P01861 327 aa15.25■□□□□ 0.03
PDLIM3-212ENST00000620787 RPL7P18124 248 aaKnown RBP15.24■□□□□ 0.03
PDLIM3-212ENST00000620787 S100A7P31151 101 aa15.24■□□□□ 0.03
PDLIM3-212ENST00000620787 BMI1P35226 326 aa15.24■□□□□ 0.03
PDLIM3-212ENST00000620787 MAP1LC3AQ9H492 121 aa15.24■□□□□ 0.03
PDLIM3-212ENST00000620787 ZMAT4Q9H898 229 aa15.24■□□□□ 0.03
PDLIM3-212ENST00000620787 SPCS1Q9Y6A9 102 aa15.24■□□□□ 0.03
PDLIM3-212ENST00000620787 POLEQ07864 2286 aa15.24■□□□□ 0.03
PDLIM3-212ENST00000620787 FBLL1A6NHQ2 334 aaKnown RBP15.24■□□□□ 0.03
PDLIM3-212ENST00000620787 IGFL4Q6B9Z1 124 aa15.24■□□□□ 0.03
PDLIM3-212ENST00000620787 OR5A1Q8NGJ0 315 aa15.24■□□□□ 0.03
PDLIM3-212ENST00000620787 SMAD5-AS1Q9Y6J3 95 aa15.24■□□□□ 0.03
PDLIM3-212ENST00000620787 IGKV2D-26A0A0A0MRZ7 120 aa15.23■□□□□ 0.03
PDLIM3-212ENST00000620787 HLA-DMBP28068 263 aa15.23■□□□□ 0.03
PDLIM3-212ENST00000620787 ODF1Q14990 250 aa15.23■□□□□ 0.03
PDLIM3-212ENST00000620787 TM4SF20Q53R12 229 aa15.23■□□□□ 0.03
PDLIM3-212ENST00000620787 CNFNQ9BYD5 112 aa15.23■□□□□ 0.03
PDLIM3-212ENST00000620787 TTC28Q96AY4 2481 aa15.23■□□□□ 0.03
PDLIM3-212ENST00000620787 SRSF2Q01130 221 aaKnown RBP15.22■□□□□ 0.03
PDLIM3-212ENST00000620787 DPM3Q9P2X0 92 aa15.22■□□□□ 0.03
PDLIM3-212ENST00000620787 LEPP41159 167 aa15.22■□□□□ 0.03
PDLIM3-212ENST00000620787 C5orf64Q2M2E5 130 aa15.22■□□□□ 0.03
PDLIM3-212ENST00000620787 C21orf62Q9NYP8 219 aa15.22■□□□□ 0.03
PDLIM3-212ENST00000620787 HHLA3Q9XRX5 114 aa15.22■□□□□ 0.03
PDLIM3-212ENST00000620787 IGHV3-23P01764 117 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms