RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 C21orf62-AS1Q17RA5 79 aa9.1□□□□□ -0.95
CLIP1-219ENST00000620786 GBF1Q92538 1859 aa9.1□□□□□ -0.95
CLIP1-219ENST00000620786 SPXQ9BT56 116 aa9.09□□□□□ -0.95
CLIP1-219ENST00000620786 TIMM21Q9BVV7 248 aa9.09□□□□□ -0.95
CLIP1-219ENST00000620786 MYMXA0A1B0GTQ4 84 aa9.09□□□□□ -0.95
CLIP1-219ENST00000620786 C1orf194Q5T5A4 169 aa9.09□□□□□ -0.95
CLIP1-219ENST00000620786 HAPLN4Q86UW8 402 aa9.09□□□□□ -0.95
CLIP1-219ENST00000620786 AMN1Q8IY45 258 aa9.09□□□□□ -0.95
CLIP1-219ENST00000620786 DLX4Q92988 240 aaPredicted RBP9.09□□□□□ -0.95
CLIP1-219ENST00000620786 A0A096LPF7 62 aa9.09□□□□□ -0.95
CLIP1-219ENST00000620786 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.09□□□□□ -0.95
CLIP1-219ENST00000620786 PFN1P07737 140 aaKnown RBP9.09□□□□□ -0.95
CLIP1-219ENST00000620786 CDKN1BP46527 198 aa9.09□□□□□ -0.95
CLIP1-219ENST00000620786 DIAPH2-AS1Q14236 149 aa9.09□□□□□ -0.95
CLIP1-219ENST00000620786 PRIMA1Q86XR5 153 aa9.09□□□□□ -0.95
CLIP1-219ENST00000620786 A0A1B0GV90 55 aa9.09□□□□□ -0.96
CLIP1-219ENST00000620786 IGHV2-70P01814 119 aa9.09□□□□□ -0.96
CLIP1-219ENST00000620786 VWC2Q2TAL6 325 aa9.09□□□□□ -0.96
CLIP1-219ENST00000620786 LY6G5BQ8NDX9 201 aa9.09□□□□□ -0.96
CLIP1-219ENST00000620786 LY96Q9Y6Y9 160 aa9.09□□□□□ -0.96
CLIP1-219ENST00000620786 IGHV4-30-2A0A087WSY4 118 aa9.08□□□□□ -0.96
CLIP1-219ENST00000620786 IGHV7-4-1A0A0J9YVY3 117 aa9.08□□□□□ -0.96
CLIP1-219ENST00000620786 CCL24O00175 119 aa9.08□□□□□ -0.96
CLIP1-219ENST00000620786 FREM3P0C091 2139 aa9.08□□□□□ -0.96
CLIP1-219ENST00000620786 IGF2-ASQ6U949 168 aa9.08□□□□□ -0.96
CLIP1-219ENST00000620786 LINC00518Q8N0U6 118 aa9.08□□□□□ -0.96
CLIP1-219ENST00000620786 IGF2BP2-AS1Q96M15 143 aa9.08□□□□□ -0.96
CLIP1-219ENST00000620786 A8MWV9 139 aa9.08□□□□□ -0.96
CLIP1-219ENST00000620786 KIF26BQ2KJY2 2108 aa9.08□□□□□ -0.96
CLIP1-219ENST00000620786 THAP8Q8NA92 274 aa9.08□□□□□ -0.96
CLIP1-219ENST00000620786 FNDC4Q9H6D8 234 aaPredicted RBP9.08□□□□□ -0.96
CLIP1-219ENST00000620786 TRAV8-4A0A0B4J246 113 aa9.07□□□□□ -0.96
CLIP1-219ENST00000620786 GAGE6Q13070 117 aa9.07□□□□□ -0.96
CLIP1-219ENST00000620786 ORAOV1Q8WV07 137 aa9.07□□□□□ -0.96
CLIP1-219ENST00000620786 ESPL1Q14674 2120 aa9.07□□□□□ -0.96
CLIP1-219ENST00000620786 A0A1B0GW64 132 aa9.07□□□□□ -0.96
CLIP1-219ENST00000620786 C9orf66Q5T8R8 295 aa9.07□□□□□ -0.96
CLIP1-219ENST00000620786 NKAPP1Q8N9T2 125 aa9.07□□□□□ -0.96
CLIP1-219ENST00000620786 IGHV4-61A0A0C4DH41 118 aa9.07□□□□□ -0.96
CLIP1-219ENST00000620786 NRGNQ92686 78 aa9.07□□□□□ -0.96
CLIP1-219ENST00000620786 LINC00479Q96M42 142 aa9.07□□□□□ -0.96
CLIP1-219ENST00000620786 TMEM242Q9NWH2 141 aa9.07□□□□□ -0.96
CLIP1-219ENST00000620786 FANCMQ8IYD8 2048 aa9.07□□□□□ -0.96
CLIP1-219ENST00000620786 ZNF318Q5VUA4 2279 aa9.07□□□□□ -0.96
CLIP1-219ENST00000620786 C22orf46C9J442 243 aa9.07□□□□□ -0.96
CLIP1-219ENST00000620786 MMP23AO75900 390 aa9.07□□□□□ -0.96
CLIP1-219ENST00000620786 ZNRF2Q8NHG8 242 aa9.07□□□□□ -0.96
CLIP1-219ENST00000620786 LAMTOR2Q9Y2Q5 125 aa9.07□□□□□ -0.96
CLIP1-219ENST00000620786 IGHV3-38A0A0C4DH36 116 aa9.07□□□□□ -0.96
CLIP1-219ENST00000620786 TRBV19A0A075B6N1 114 aa9.06□□□□□ -0.96
CLIP1-219ENST00000620786 H3BUA1 57 aa9.06□□□□□ -0.96
CLIP1-219ENST00000620786 I3L3M4 83 aa9.06□□□□□ -0.96
CLIP1-219ENST00000620786 H3BRN7 92 aa9.06□□□□□ -0.96
CLIP1-219ENST00000620786 C15orf65H3BRN8 121 aa9.06□□□□□ -0.96
CLIP1-219ENST00000620786 HIST1H2BKO60814 126 aa9.06□□□□□ -0.96
CLIP1-219ENST00000620786 HIST1H2BJP06899 126 aa9.06□□□□□ -0.96
CLIP1-219ENST00000620786 CXCL1P09341 107 aa9.06□□□□□ -0.96
CLIP1-219ENST00000620786 HIST1H2BOP23527 126 aa9.06□□□□□ -0.96
CLIP1-219ENST00000620786 HIST1H2BBP33778 126 aa9.06□□□□□ -0.96
CLIP1-219ENST00000620786 HIST1H2BDP58876 126 aa9.06□□□□□ -0.96
CLIP1-219ENST00000620786 HIST1H2BCP62807 126 aa9.06□□□□□ -0.96
CLIP1-219ENST00000620786 HIST2H2BEQ16778 126 aa9.06□□□□□ -0.96
CLIP1-219ENST00000620786 DEFB136Q30KP8 78 aa9.06□□□□□ -0.96
CLIP1-219ENST00000620786 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.06□□□□□ -0.96
CLIP1-219ENST00000620786 HIST1H2BHQ93079 126 aa9.06□□□□□ -0.96
CLIP1-219ENST00000620786 HIST1H2BNQ99877 126 aa9.06□□□□□ -0.96
CLIP1-219ENST00000620786 HIST1H2BMQ99879 126 aa9.06□□□□□ -0.96
CLIP1-219ENST00000620786 TMEM243Q9BU79 118 aa9.06□□□□□ -0.96
CLIP1-219ENST00000620786 TNFRSF6BO95407 300 aa9.06□□□□□ -0.96
CLIP1-219ENST00000620786 ANXA2RQ3ZCQ2 193 aa9.06□□□□□ -0.96
CLIP1-219ENST00000620786 GFRA4Q9GZZ7 299 aa9.06□□□□□ -0.96
CLIP1-219ENST00000620786 KAAG1Q9UBP8 84 aa9.06□□□□□ -0.96
CLIP1-219ENST00000620786 HSD52Q0P140 79 aa9.06□□□□□ -0.96
CLIP1-219ENST00000620786 IGHV4-38-2P0DP08 117 aa9.05□□□□□ -0.96
CLIP1-219ENST00000620786 IGFL2Q6UWQ7 119 aa9.05□□□□□ -0.96
CLIP1-219ENST00000620786 ADORA2A-AS1P86434 159 aa9.05□□□□□ -0.96
CLIP1-219ENST00000620786 TP53TG1Q9Y2A0 90 aa9.05□□□□□ -0.96
CLIP1-219ENST00000620786 TMEM213A2RRL7 107 aa9.05□□□□□ -0.96
CLIP1-219ENST00000620786 HOXD3P31249 432 aaPredicted RBP9.05□□□□□ -0.96
CLIP1-219ENST00000620786 ARTNQ5T4W7 220 aa9.04□□□□□ -0.96
CLIP1-219ENST00000620786 FAM186AA6NE01 2351 aa9.04□□□□□ -0.96
CLIP1-219ENST00000620786 ZNF524Q96C55 264 aa9.04□□□□□ -0.96
CLIP1-219ENST00000620786 ZNF479Q96JC4 524 aa9.04□□□□□ -0.96
CLIP1-219ENST00000620786 ANAPC10Q9UM13 185 aa9.04□□□□□ -0.96
CLIP1-219ENST00000620786 LGALS1P09382 135 aaKnown RBP9.04□□□□□ -0.96
CLIP1-219ENST00000620786 ZNF134P52741 427 aa9.04□□□□□ -0.96
CLIP1-219ENST00000620786 PMVKQ15126 192 aa9.04□□□□□ -0.96
CLIP1-219ENST00000620786 CTSZQ9UBR2 303 aa9.04□□□□□ -0.96
CLIP1-219ENST00000620786 A0A0J9YY99 117 aa9.04□□□□□ -0.96
CLIP1-219ENST00000620786 LHBP01229 141 aa9.04□□□□□ -0.96
CLIP1-219ENST00000620786 INTS1Q8N201 2190 aaKnown RBP9.03□□□□□ -0.96
CLIP1-219ENST00000620786 KLF12Q9Y4X4 402 aa9.03□□□□□ -0.96
CLIP1-219ENST00000620786 NLRC5Q86WI3 1866 aa9.03□□□□□ -0.96
CLIP1-219ENST00000620786 MYO7BQ6PIF6 2116 aa9.03□□□□□ -0.96
CLIP1-219ENST00000620786 RTTNQ86VV8 2226 aa9.03□□□□□ -0.96
CLIP1-219ENST00000620786 TRBV24-1A0A075B6N3 115 aa9.03□□□□□ -0.96
CLIP1-219ENST00000620786 WT1-ASQ06250 92 aa9.03□□□□□ -0.96
CLIP1-219ENST00000620786 ZNF625Q96I27 306 aaPredicted RBP9.03□□□□□ -0.96
CLIP1-219ENST00000620786 PLXNA2O75051 1894 aa9.03□□□□□ -0.96
CLIP1-219ENST00000620786 PRSS46E5RG02 174 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms