RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 C21orf62Q9NYP8 219 aa4.06□□□□□ -1.76
VPS13D-214ENST00000620676 ZFYVE26Q68DK2 2539 aa4.06□□□□□ -1.76
VPS13D-214ENST00000620676 Q6P435 159 aa4.06□□□□□ -1.76
VPS13D-214ENST00000620676 PRDM14Q9GZV8 571 aa4.06□□□□□ -1.76
VPS13D-214ENST00000620676 LY6EQ16553 131 aa4.06□□□□□ -1.76
VPS13D-214ENST00000620676 MPLKIPQ8TAP9 179 aa4.06□□□□□ -1.76
VPS13D-214ENST00000620676 SLC25A39Q9BZJ4 359 aaPredicted RBP4.06□□□□□ -1.76
VPS13D-214ENST00000620676 GFRA3O60609 400 aa4.06□□□□□ -1.76
VPS13D-214ENST00000620676 LY96Q9Y6Y9 160 aa4.06□□□□□ -1.76
VPS13D-214ENST00000620676 TRAV12-2A0A075B6T6 113 aa4.06□□□□□ -1.76
VPS13D-214ENST00000620676 CEACAM4O75871 244 aa4.06□□□□□ -1.76
VPS13D-214ENST00000620676 FLVCR1-AS1Q8TAF5 88 aa4.06□□□□□ -1.76
VPS13D-214ENST00000620676 CHCHD2Q9Y6H1 151 aaPredicted RBP4.06□□□□□ -1.76
VPS13D-214ENST00000620676 SIT1Q9Y3P8 196 aa4.06□□□□□ -1.76
VPS13D-214ENST00000620676 PINLYPA6NC86 204 aa4.06□□□□□ -1.76
VPS13D-214ENST00000620676 DOCK3Q8IZD9 2030 aa4.06□□□□□ -1.76
VPS13D-214ENST00000620676 CCL3L1P16619 93 aa4.06□□□□□ -1.76
VPS13D-214ENST00000620676 XGP55808 180 aa4.06□□□□□ -1.76
VPS13D-214ENST00000620676 FAM57AQ8TBR7 257 aa4.06□□□□□ -1.76
VPS13D-214ENST00000620676 TNS1Q9HBL0 1735 aaKnown RBP4.06□□□□□ -1.76
VPS13D-214ENST00000620676 SMPXQ9UHP9 88 aa4.06□□□□□ -1.76
VPS13D-214ENST00000620676 MED13LQ71F56 2210 aa4.06□□□□□ -1.76
VPS13D-214ENST00000620676 BDP1A6H8Y1 2624 aa4.06□□□□□ -1.76
VPS13D-214ENST00000620676 HERVK_113P63121 156 aa4.06□□□□□ -1.76
VPS13D-214ENST00000620676 CR1LQ2VPA4 569 aa4.06□□□□□ -1.76
VPS13D-214ENST00000620676 BAALC-AS2P0C853 105 aa4.06□□□□□ -1.76
VPS13D-214ENST00000620676 C10orf105Q8TEF2 133 aa4.06□□□□□ -1.76
VPS13D-214ENST00000620676 DOCK4Q8N1I0 1966 aa4.05□□□□□ -1.76
VPS13D-214ENST00000620676 C9orf172C9J069 976 aa4.05□□□□□ -1.76
VPS13D-214ENST00000620676 LYNX1G3V0Z9 82 aa4.05□□□□□ -1.76
VPS13D-214ENST00000620676 IGHV3-11P01762 117 aa4.05□□□□□ -1.76
VPS13D-214ENST00000620676 LYNX1P0DP58 116 aa4.05□□□□□ -1.76
VPS13D-214ENST00000620676 MAPKAPK5-AS1Q8N8E1 139 aa4.05□□□□□ -1.76
VPS13D-214ENST00000620676 COL5A3P25940 1745 aaPredicted RBP4.05□□□□□ -1.76
VPS13D-214ENST00000620676 GCSAMQ8N6F7 178 aa4.05□□□□□ -1.76
VPS13D-214ENST00000620676 COLQQ9Y215 455 aaPredicted RBP4.05□□□□□ -1.76
VPS13D-214ENST00000620676 LOC285556D6RIA3 1793 aa4.05□□□□□ -1.76
VPS13D-214ENST00000620676 Q86TA4 180 aa4.05□□□□□ -1.76
VPS13D-214ENST00000620676 FANCMQ8IYD8 2048 aa4.05□□□□□ -1.76
VPS13D-214ENST00000620676 HRCT1Q6UXD1 115 aa4.05□□□□□ -1.76
VPS13D-214ENST00000620676 IMMP1LQ96LU5 166 aa4.05□□□□□ -1.76
VPS13D-214ENST00000620676 SIPA1L1O43166 1804 aa4.05□□□□□ -1.76
VPS13D-214ENST00000620676 SDIM1Q6ZPB5 146 aa4.05□□□□□ -1.76
VPS13D-214ENST00000620676 DYSFO75923 2080 aa4.05□□□□□ -1.76
VPS13D-214ENST00000620676 LAMTOR3Q9UHA4 124 aa4.05□□□□□ -1.76
VPS13D-214ENST00000620676 ANKHD1Q8IWZ3 2542 aaKnown RBP4.05□□□□□ -1.76
VPS13D-214ENST00000620676 OOSP1A8MZH6 123 aa4.05□□□□□ -1.76
VPS13D-214ENST00000620676 PYGO2Q9BRQ0 406 aa4.05□□□□□ -1.76
VPS13D-214ENST00000620676 SLC25A45Q8N413 288 aa4.05□□□□□ -1.76
VPS13D-214ENST00000620676 RAB1BQ9H0U4 201 aa4.05□□□□□ -1.76
VPS13D-214ENST00000620676 PRCDQ00LT1 54 aa4.05□□□□□ -1.76
VPS13D-214ENST00000620676 PAX4O43316 350 aa4.05□□□□□ -1.76
VPS13D-214ENST00000620676 RNASE2P10153 161 aaKnown RBP4.05□□□□□ -1.76
VPS13D-214ENST00000620676 FAM104BQ5XKR9 115 aa4.05□□□□□ -1.76
VPS13D-214ENST00000620676 ASCL5Q7RTU5 278 aa4.05□□□□□ -1.76
VPS13D-214ENST00000620676 C1orf147Q96MC9 270 aaPredicted RBP4.05□□□□□ -1.76
VPS13D-214ENST00000620676 LGALS1P09382 135 aaKnown RBP4.05□□□□□ -1.76
VPS13D-214ENST00000620676 CD177Q8N6Q3 437 aa4.05□□□□□ -1.76
VPS13D-214ENST00000620676 RAB1CQ92928 201 aa4.05□□□□□ -1.76
VPS13D-214ENST00000620676 RPL39LQ96EH5 51 aaKnown RBP4.05□□□□□ -1.76
VPS13D-214ENST00000620676 ANAPC10Q9UM13 185 aa4.05□□□□□ -1.76
VPS13D-214ENST00000620676 TCL1BO95988 128 aa4.04□□□□□ -1.76
VPS13D-214ENST00000620676 PSMG4Q5JS54 123 aa4.04□□□□□ -1.76
VPS13D-214ENST00000620676 TP53TG1Q9Y2A0 90 aa4.04□□□□□ -1.76
VPS13D-214ENST00000620676 DOCK1Q14185 1865 aa4.04□□□□□ -1.76
VPS13D-214ENST00000620676 TRGV8A0A0C4DH27 118 aa4.04□□□□□ -1.76
VPS13D-214ENST00000620676 PRRG2O14669 202 aa4.04□□□□□ -1.76
VPS13D-214ENST00000620676 CD3EP07766 207 aa4.04□□□□□ -1.76
VPS13D-214ENST00000620676 KLK5Q9Y337 293 aaPredicted RBP4.04□□□□□ -1.76
VPS13D-214ENST00000620676 CSDC2Q9Y534 153 aaKnown RBP4.04□□□□□ -1.76
VPS13D-214ENST00000620676 SYNJ2BPP57105 145 aa4.04□□□□□ -1.76
VPS13D-214ENST00000620676 TEN1Q86WV5 123 aa4.04□□□□□ -1.76
VPS13D-214ENST00000620676 LINC01545Q5VT33 79 aa4.04□□□□□ -1.76
VPS13D-214ENST00000620676 RNF125Q96EQ8 232 aa4.04□□□□□ -1.76
VPS13D-214ENST00000620676 COL24A1Q17RW2 1714 aa4.04□□□□□ -1.76
VPS13D-214ENST00000620676 LINC00271P0C7V0 271 aa4.04□□□□□ -1.76
VPS13D-214ENST00000620676 CRYGSP22914 178 aa4.04□□□□□ -1.76
VPS13D-214ENST00000620676 SPATA25Q9BR10 227 aa4.04□□□□□ -1.76
VPS13D-214ENST00000620676 ADAMTS7Q9UKP4 1686 aa4.04□□□□□ -1.76
VPS13D-214ENST00000620676 hADV29S1A0JD25 119 aa4.04□□□□□ -1.76
VPS13D-214ENST00000620676 A4D1N5 150 aa4.04□□□□□ -1.76
VPS13D-214ENST00000620676 U3KQE9 123 aa4.04□□□□□ -1.76
VPS13D-214ENST00000620676 MSRB1Q9NZV6 116 aa4.04□□□□□ -1.76
VPS13D-214ENST00000620676 DKK1O94907 266 aa4.04□□□□□ -1.76
VPS13D-214ENST00000620676 COPS9Q8WXC6 57 aa4.04□□□□□ -1.76
VPS13D-214ENST00000620676 DDB2Q92466 427 aa4.04□□□□□ -1.76
VPS13D-214ENST00000620676 KIAA2026Q5HYC2 2103 aa4.04□□□□□ -1.76
VPS13D-214ENST00000620676 MTORP42345 2549 aa4.04□□□□□ -1.76
VPS13D-214ENST00000620676 KLRD1Q13241 179 aa4.04□□□□□ -1.76
VPS13D-214ENST00000620676 GTSF1Q8WW33 167 aa4.04□□□□□ -1.76
VPS13D-214ENST00000620676 LRRK1Q38SD2 2015 aa4.04□□□□□ -1.76
VPS13D-214ENST00000620676 RBAKDNA6NC62 111 aa4.04□□□□□ -1.76
VPS13D-214ENST00000620676 IGLV3-21P80748 117 aaPredicted RBP4.04□□□□□ -1.76
VPS13D-214ENST00000620676 PPDPFQ9H3Y8 114 aa4.04□□□□□ -1.76
VPS13D-214ENST00000620676 VWC2LB2RUY7 222 aa4.04□□□□□ -1.76
VPS13D-214ENST00000620676 Q6AWC8 147 aa4.04□□□□□ -1.76
VPS13D-214ENST00000620676 TDHQ8IZJ6 230 aa4.03□□□□□ -1.76
VPS13D-214ENST00000620676 TIMM21Q9BVV7 248 aa4.03□□□□□ -1.76
VPS13D-214ENST00000620676 CTRLP40313 264 aa4.03□□□□□ -1.76
VPS13D-214ENST00000620676 A0A087WX48 190 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms