RNA–Protein interactions for RNA: ENST00000619485.4

TP53-225, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,506 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-225ENST00000619485 C12orf54Q6X4T0 127 aa8.2□□□□□ -1.1
TP53-225ENST00000619485 C1orf122Q6ZSJ8 110 aa8.2□□□□□ -1.1
TP53-225ENST00000619485 PPP1R27Q86WC6 154 aa8.2□□□□□ -1.1
TP53-225ENST00000619485 KRTAP3-3Q9BYR6 98 aa8.2□□□□□ -1.1
TP53-225ENST00000619485 KRTAP3-2Q9BYR7 98 aa8.2□□□□□ -1.1
TP53-225ENST00000619485 GFRA4Q9GZZ7 299 aa8.2□□□□□ -1.1
TP53-225ENST00000619485 TMEM133Q9H2Q1 129 aa8.2□□□□□ -1.1
TP53-225ENST00000619485 IGLC1P0CG04 106 aa8.19□□□□□ -1.1
TP53-225ENST00000619485 RBPJQ06330 500 aa8.19□□□□□ -1.1
TP53-225ENST00000619485 F11RQ9Y624 299 aaKnown RBP8.19□□□□□ -1.1
TP53-225ENST00000619485 CCL21O00585 134 aa8.19□□□□□ -1.1
TP53-225ENST00000619485 IGLV2-11P01706 119 aa8.19□□□□□ -1.1
TP53-225ENST00000619485 IFI27P40305 119 aaPredicted RBP8.19□□□□□ -1.1
TP53-225ENST00000619485 TNP2Q05952 138 aa8.19□□□□□ -1.1
TP53-225ENST00000619485 C3orf36Q3SXR2 165 aa8.19□□□□□ -1.1
TP53-225ENST00000619485 PET117Q6UWS5 81 aa8.19□□□□□ -1.1
TP53-225ENST00000619485 RPEQ96AT9 228 aa8.19□□□□□ -1.1
TP53-225ENST00000619485 IGHV1-3A0A0C4DH29 117 aa8.18□□□□□ -1.1
TP53-225ENST00000619485 A0A1W2PPR1 153 aa8.18□□□□□ -1.1
TP53-225ENST00000619485 IL4P05112 153 aa8.18□□□□□ -1.1
TP53-225ENST00000619485 FCGR2BP31994 310 aaPredicted RBP8.18□□□□□ -1.1
TP53-225ENST00000619485 GPR183P32249 361 aa8.18□□□□□ -1.1
TP53-225ENST00000619485 RIGQ13278 110 aa8.18□□□□□ -1.1
TP53-225ENST00000619485 TMEM155Q4W5P6 130 aa8.18□□□□□ -1.1
TP53-225ENST00000619485 KLF17Q5JT82 389 aaPredicted RBP8.18□□□□□ -1.1
TP53-225ENST00000619485 FAM71F2Q6NXP2 309 aa8.18□□□□□ -1.1
TP53-225ENST00000619485 WFDC3Q8IUB2 231 aa8.18□□□□□ -1.1
TP53-225ENST00000619485 DEFB125Q8N687 156 aa8.18□□□□□ -1.1
TP53-225ENST00000619485 C8orf49Q96NF6 230 aa8.18□□□□□ -1.1
TP53-225ENST00000619485 NAA38Q9BRA0 125 aaKnown RBP8.18□□□□□ -1.1
TP53-225ENST00000619485 NGBQ9NPG2 151 aa8.18□□□□□ -1.1
TP53-225ENST00000619485 LOXL1Q08397 574 aaPredicted RBP8.18□□□□□ -1.1
TP53-225ENST00000619485 LCE2DQ5TA82 110 aaPredicted RBP8.18□□□□□ -1.1
TP53-225ENST00000619485 BPIFA4PQ86YQ2 179 aa8.18□□□□□ -1.1
TP53-225ENST00000619485 LINC00311Q8N616 119 aa8.18□□□□□ -1.1
TP53-225ENST00000619485 NEU4Q8WWR8 484 aaPredicted RBP8.18□□□□□ -1.1
TP53-225ENST00000619485 TEX22C9J3V5 150 aa8.17□□□□□ -1.1
TP53-225ENST00000619485 D6R8Y8 96 aa8.17□□□□□ -1.1
TP53-225ENST00000619485 NPIPB6E9PJ23 425 aa8.17□□□□□ -1.1
TP53-225ENST00000619485 K7EQM0 130 aa8.17□□□□□ -1.1
TP53-225ENST00000619485 CT45A10P0DMU9 189 aa8.17□□□□□ -1.1
TP53-225ENST00000619485 CSN1S1P47710 185 aa8.17□□□□□ -1.1
TP53-225ENST00000619485 PSG9Q00887 426 aa8.17□□□□□ -1.1
TP53-225ENST00000619485 HIST1H1AQ02539 215 aaPredicted RBP8.17□□□□□ -1.1
TP53-225ENST00000619485 SCGB2A2Q13296 93 aa8.17□□□□□ -1.1
TP53-225ENST00000619485 PSG8Q9UQ74 426 aa8.17□□□□□ -1.1
TP53-225ENST00000619485 POLQO75417 2590 aa8.17□□□□□ -1.1
TP53-225ENST00000619485 TMEM213A2RRL7 107 aa8.17□□□□□ -1.1
TP53-225ENST00000619485 DLX6P56179 175 aa8.17□□□□□ -1.1
TP53-225ENST00000619485 BCL6BQ8N143 479 aaPredicted RBP8.17□□□□□ -1.1
TP53-225ENST00000619485 OR10AG1Q8NH19 301 aa8.17□□□□□ -1.1
TP53-225ENST00000619485 RNASE6Q93091 150 aaKnown RBP8.17□□□□□ -1.1
TP53-225ENST00000619485 SPG11Q96JI7 2443 aa8.16□□□□□ -1.1
TP53-225ENST00000619485 ZANQ9Y493 2812 aa8.16□□□□□ -1.1
TP53-225ENST00000619485 TRBV19A0A075B6N1 114 aa8.16□□□□□ -1.1
TP53-225ENST00000619485 TRAV8-6A0A0B4J262 113 aa8.16□□□□□ -1.1
TP53-225ENST00000619485 C7orf71A4D174 169 aa8.16□□□□□ -1.1
TP53-225ENST00000619485 SAP30O75446 220 aa8.16□□□□□ -1.1
TP53-225ENST00000619485 IGKV1-17P01599 117 aa8.16□□□□□ -1.1
TP53-225ENST00000619485 AMN1Q8IY45 258 aa8.16□□□□□ -1.1
TP53-225ENST00000619485 ZNF747Q9BV97 191 aa8.16□□□□□ -1.1
TP53-225ENST00000619485 ONECUT1Q9UBC0 465 aa8.16□□□□□ -1.1
TP53-225ENST00000619485 HILPDAQ9Y5L2 63 aa8.16□□□□□ -1.1
TP53-225ENST00000619485 IGHV3OR16-8A0A075B7F1 116 aa8.15□□□□□ -1.1
TP53-225ENST00000619485 FAM231BA6NCW3 169 aa8.15□□□□□ -1.1
TP53-225ENST00000619485 ZNF785A8K8V0 405 aa8.15□□□□□ -1.1
TP53-225ENST00000619485 IGHV3-23P01764 117 aa8.15□□□□□ -1.1
TP53-225ENST00000619485 PPIAL4GP0DN37 164 aa8.15□□□□□ -1.1
TP53-225ENST00000619485 CRIP1P50238 77 aa8.15□□□□□ -1.1
TP53-225ENST00000619485 LINC01545Q5VT33 79 aa8.15□□□□□ -1.1
TP53-225ENST00000619485 ZNF48Q96MX3 618 aaPredicted RBP8.15□□□□□ -1.1
TP53-225ENST00000619485 C1RLQ9NZP8 487 aa8.15□□□□□ -1.1
TP53-225ENST00000619485 FBN2P35556 2912 aa8.15□□□□□ -1.1
TP53-225ENST00000619485 WNK2Q9Y3S1 2297 aa8.15□□□□□ -1.1
TP53-225ENST00000619485 SMKR1H3BMG3 65 aa8.15□□□□□ -1.1
TP53-225ENST00000619485 BUB1B-PAK6H3BSN5 160 aa8.15□□□□□ -1.1
TP53-225ENST00000619485 I3L2K1 104 aa8.15□□□□□ -1.1
TP53-225ENST00000619485 PLP1P60201 277 aa8.15□□□□□ -1.1
TP53-225ENST00000619485 CACNG7P62955 275 aa8.15□□□□□ -1.1
TP53-225ENST00000619485 PSG3Q16557 428 aa8.15□□□□□ -1.1
TP53-225ENST00000619485 LYZL1Q6UWQ5 148 aa8.15□□□□□ -1.1
TP53-225ENST00000619485 EPG5Q9HCE0 2579 aa8.15□□□□□ -1.11
TP53-225ENST00000619485 GAGE12BA1L429 117 aa8.14□□□□□ -1.11
TP53-225ENST00000619485 G3V4G9 280 aa8.14□□□□□ -1.11
TP53-225ENST00000619485 COX8AP10176 69 aa8.14□□□□□ -1.11
TP53-225ENST00000619485 HES1Q14469 280 aa8.14□□□□□ -1.11
TP53-225ENST00000619485 SAMD13Q5VXD3 122 aa8.14□□□□□ -1.11
TP53-225ENST00000619485 IGFL4Q6B9Z1 124 aa8.14□□□□□ -1.11
TP53-225ENST00000619485 SIGLEC15Q6ZMC9 328 aa8.14□□□□□ -1.11
TP53-225ENST00000619485 RAB37Q96AX2 223 aa8.14□□□□□ -1.11
TP53-225ENST00000619485 RNF125Q96EQ8 232 aa8.14□□□□□ -1.11
TP53-225ENST00000619485 AP1S3Q96PC3 154 aa8.14□□□□□ -1.11
TP53-225ENST00000619485 VKORC1Q9BQB6 163 aa8.14□□□□□ -1.11
TP53-225ENST00000619485 MS4A6AQ9H2W1 248 aa8.14□□□□□ -1.11
TP53-225ENST00000619485 IGKV2-40A0A087WW87 121 aaPredicted RBP8.14□□□□□ -1.11
TP53-225ENST00000619485 IGHV3-35A0A0C4DH35 117 aa8.14□□□□□ -1.11
TP53-225ENST00000619485 NDUFS7O75251 213 aa8.14□□□□□ -1.11
TP53-225ENST00000619485 IGKV2D-40P01614 121 aaPredicted RBP8.14□□□□□ -1.11
TP53-225ENST00000619485 NMUP48645 174 aa8.14□□□□□ -1.11
TP53-225ENST00000619485 PAX2Q02962 417 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms