RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, human

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD3-215	ENST00000619322	PNKD	Q8N490	385 aa		4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	C5orf17	Q8NAS9	161 aa		4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	UBALD1	Q8TB05	177 aa		4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	ZNF414	Q96IQ9	312 aa		4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	ONECUT1	Q9UBC0	465 aa		4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	NUPR2	A6NF83	97 aa		4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322		B5MCH6	92 aa		4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	NBR2	O15453	112 aa		4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	SERPINE2	P07093	398 aa		4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	TSPO	P30536	169 aa		4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	CD81	P60033	236 aa		4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	FAM90A2P	Q658T7	463 aa		4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	MRAP	Q8TCY5	172 aa		4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	BET1L	Q9NYM9	111 aa		4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	ARL2-SNX15	V9GYD0	113 aa		4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	IGHV7-81	A0A0B4J1V7	117 aa		4.09	□□□□□ -1.75
CBWD3-215	ENST00000619322	LOC102723971	A0A1B0GUV8	181 aa		4.09	□□□□□ -1.75
CBWD3-215	ENST00000619322		A0A1B0GVY2	172 aa		4.09	□□□□□ -1.75
CBWD3-215	ENST00000619322		G3V4G9	280 aa		4.09	□□□□□ -1.75
CBWD3-215	ENST00000619322		K7EQM0	130 aa		4.09	□□□□□ -1.75
CBWD3-215	ENST00000619322	HSPB6	O14558	160 aa		4.09	□□□□□ -1.75
CBWD3-215	ENST00000619322	SYNGR2	O43760	224 aa		4.09	□□□□□ -1.75
CBWD3-215	ENST00000619322	IGLC2	P0DOY2	106 aa		4.09	□□□□□ -1.75
CBWD3-215	ENST00000619322	IGLC3	P0DOY3	106 aa		4.09	□□□□□ -1.75
CBWD3-215	ENST00000619322	BSX	Q3C1V8	233 aa		4.09	□□□□□ -1.75
CBWD3-215	ENST00000619322	OR1L1	Q8NH94	360 aa		4.09	□□□□□ -1.75
CBWD3-215	ENST00000619322	BLNK	Q8WV28	456 aa		4.09	□□□□□ -1.75
CBWD3-215	ENST00000619322	C18orf15	Q96N68	181 aa		4.09	□□□□□ -1.75
CBWD3-215	ENST00000619322	FZR1	Q9UM11	496 aa		4.09	□□□□□ -1.75
CBWD3-215	ENST00000619322	LINC00473	A8K010	186 aa		4.09	□□□□□ -1.76
CBWD3-215	ENST00000619322		H0YJW9	148 aa		4.09	□□□□□ -1.76
CBWD3-215	ENST00000619322		H3BUT2	72 aa		4.09	□□□□□ -1.76
CBWD3-215	ENST00000619322		K7ERU9	68 aa		4.09	□□□□□ -1.76
CBWD3-215	ENST00000619322	HBZ	P02008	142 aa		4.09	□□□□□ -1.76
CBWD3-215	ENST00000619322	GP9	P14770	177 aa		4.09	□□□□□ -1.76
CBWD3-215	ENST00000619322	CEBPD	P49716	269 aa	Predicted RBP	4.09	□□□□□ -1.76
CBWD3-215	ENST00000619322	SSBP2	P81877	361 aa	Predicted RBP	4.09	□□□□□ -1.76
CBWD3-215	ENST00000619322	SERF2	P84101	59 aa		4.09	□□□□□ -1.76
CBWD3-215	ENST00000619322	FGFRL1	Q8N441	504 aa		4.09	□□□□□ -1.76
CBWD3-215	ENST00000619322	FER1L6-AS1	Q8NA97	138 aa		4.09	□□□□□ -1.76
CBWD3-215	ENST00000619322	OR52E5	Q8NH55	327 aa		4.09	□□□□□ -1.76
CBWD3-215	ENST00000619322	OR4C12	Q96R67	309 aa		4.09	□□□□□ -1.76
CBWD3-215	ENST00000619322	MLST8	Q9BVC4	326 aa		4.09	□□□□□ -1.76
CBWD3-215	ENST00000619322	WDR61	Q9GZS3	305 aa	Known RBP	4.09	□□□□□ -1.76
CBWD3-215	ENST00000619322	SLC25A22	Q9H936	323 aa		4.09	□□□□□ -1.76
CBWD3-215	ENST00000619322	TMEM242	Q9NWH2	141 aa		4.09	□□□□□ -1.76
CBWD3-215	ENST00000619322	PKDREJ	Q9NTG1	2253 aa		4.09	□□□□□ -1.76
CBWD3-215	ENST00000619322	TRBV7-1	A0A0A6YYK4	115 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	CCL24	O00175	119 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	RRH	O14718	337 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	HOXA4	Q00056	320 aa	Predicted RBP	4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	FAM53A	Q6NSI3	398 aa	Predicted RBP	4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	LINC00173	Q6ZV60	143 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	SH2D6	Q7Z4S9	175 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	SPATA12	Q7Z6I5	190 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	OR13A1	Q8NGR1	328 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	OR51H1	Q8NH63	302 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	TMEM167A	Q8TBQ9	72 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	ORAOV1	Q8WV07	137 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	KRTAP4-9	Q9BYQ8	210 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	KCNIP1	Q9NZI2	227 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	CACNG5	Q9UF02	275 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	VAX2	Q9UIW0	290 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	TCRBV4S1A1T	A0A5B7	111 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	FAM231B	A6NCW3	169 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	TAX1BP3	O14907	124 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	MMP23A	O75900	390 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	IGKV1D-33	P01593	117 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	IGKV1-33	P01594	117 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	APOA2	P02652	100 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	CLEC3B	P05452	202 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	CSN3	P07498	182 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	RND2	P52198	227 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	ARF6	P62330	175 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	SPINK9	Q5DT21	86 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	RNASEH2C	Q8TDP1	164 aa	Known RBP	4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	GALM	Q96C23	342 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	NPVF	Q9HCQ7	196 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	DNAH8	Q96JB1	4490 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	ZNF785	A8K8V0	405 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	CA1	P00915	261 aa	Predicted RBP	4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	IAPP	P10997	89 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	IGLL1	P15814	213 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	HOXD3	P31249	432 aa	Predicted RBP	4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	DUT	P33316	252 aa	Known RBP	4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	LCE5A	Q5TCM9	118 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	ZNF826P	Q6ZT77	177 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	TMEM170A	Q8WVE7	144 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	RPRM	Q9NS64	109 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	PEMT	Q9UBM1	199 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	ROS1	P08922	2347 aa		4.08	□□□□□ -1.76
CBWD3-215	ENST00000619322	TRAV39	A0A0B4J263	110 aa		4.07	□□□□□ -1.76
CBWD3-215	ENST00000619322	GAGE10	A6NGK3	116 aa		4.07	□□□□□ -1.76
CBWD3-215	ENST00000619322	TOMM40	O96008	361 aa		4.07	□□□□□ -1.76
CBWD3-215	ENST00000619322	PFN1	P07737	140 aa	Known RBP	4.07	□□□□□ -1.76
CBWD3-215	ENST00000619322	ZNF134	P52741	427 aa		4.07	□□□□□ -1.76
CBWD3-215	ENST00000619322	AES	Q08117	197 aa		4.07	□□□□□ -1.76
CBWD3-215	ENST00000619322	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
CBWD3-215	ENST00000619322	LGALS9B	Q3B8N2	356 aa		4.07	□□□□□ -1.76
CBWD3-215	ENST00000619322	HSD17B10	Q99714	261 aa	Known RBP	4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms