RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 USMG5Q96IX5 58 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 TSC2P49815 1807 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 F6UB75 175 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 IGKV1D-33P01593 117 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 IGKV1-33P01594 117 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 RNF183Q96D59 192 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 NCKAP5O14513 1909 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 PHF3Q92576 2039 aaKnown RBP2.5□□□□□ -2.01
NEB-220ENST00000618972 LOC102723996A0A087X1L8 192 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 GP9P14770 177 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 TRAV24A0A0B4J272 114 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 C3orf22Q8N5N4 141 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 TRAV12-1A0A0B4J245 112 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 COX6A1P12074 109 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 TRPM3Q9HCF6 1732 aaPredicted RBP2.5□□□□□ -2.01
NEB-220ENST00000618972 UBE2AP49459 152 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 ZNF747Q9BV97 191 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 TRAV26-1A0A087WT03 109 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 HIST2H2BCQ6DN03 193 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 HIST2H2BDQ6DRA6 164 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 DUX4L9Q6RFH8 374 aaPredicted RBP2.5□□□□□ -2.01
NEB-220ENST00000618972 TMEM105Q8N8V8 129 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 CFHR2P36980 270 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 IGHV1OR15-9A0A0B4J2B8 117 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.5□□□□□ -2.01
NEB-220ENST00000618972 KLF14Q8TD94 323 aaPredicted RBP2.5□□□□□ -2.01
NEB-220ENST00000618972 NEU4Q8WWR8 484 aaPredicted RBP2.5□□□□□ -2.01
NEB-220ENST00000618972 DOT1LQ8TEK3 1739 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 D6R8Y8 96 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 WFDC2Q14508 124 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 MUSTN1Q8IVN3 82 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 RNASE8Q8TDE3 154 aaKnown RBP2.5□□□□□ -2.01
NEB-220ENST00000618972 UBE2WQ96B02 151 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 CRYBG1Q9Y4K1 1723 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 RHODO00212 210 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 TREML4Q6UXN2 200 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 MRPL55Q7Z7F7 128 aaKnown RBP2.5□□□□□ -2.01
NEB-220ENST00000618972 NRGNQ92686 78 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 IGHV5-10-1A0A0J9YXX1 117 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 TFF3Q07654 80 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 ZNF672Q499Z4 452 aaPredicted RBP2.5□□□□□ -2.01
NEB-220ENST00000618972 FBXL7Q9UJT9 491 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 EIF4EBP1Q13541 118 aaPredicted RBP2.5□□□□□ -2.01
NEB-220ENST00000618972 PRORYQ9H606 182 aa2.5□□□□□ -2.01
NEB-220ENST00000618972 IGHV3-72A0A0B4J1Y9 119 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 HIGD2BQ4VC39 106 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 ADARB2-AS1A8MUL3 147 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 NBASA2RRP1 2371 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 TRAV40A0A0B4J280 105 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 Q6ZUT4 128 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 Q9H3A6 140 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 PEMTQ9UBM1 199 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 CHCHD2Q9Y6H1 151 aaPredicted RBP2.49□□□□□ -2.01
NEB-220ENST00000618972 SCN10AQ9Y5Y9 1956 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 I3L3M4 83 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.49□□□□□ -2.01
NEB-220ENST00000618972 FXYD3Q14802 87 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 CFHR5Q9BXR6 569 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 ZNF492Q9P255 531 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 PATJQ8NI35 1801 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 LIFP15018 202 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 S4R3C0 116 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 DENND4AQ7Z401 1863 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 SP5Q6BEB4 398 aaPredicted RBP2.49□□□□□ -2.01
NEB-220ENST00000618972 PRSS29PA6NIE9 313 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 IGLL5B9A064 214 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 LINC01619G3V211 115 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 LINC00158P58513 81 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 SHISA2Q6UWI4 295 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 PRR15LQ9BU68 103 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 WNT2P09544 360 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 VSIG2Q96IQ7 327 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 FOXA2Q9Y261 457 aaPredicted RBP2.49□□□□□ -2.01
NEB-220ENST00000618972 COL11A1P12107 1806 aaPredicted RBP2.49□□□□□ -2.01
NEB-220ENST00000618972 TOPAZ1Q8N9V7 1692 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 RNASE2P10153 161 aaKnown RBP2.49□□□□□ -2.01
NEB-220ENST00000618972 B3GALT5-AS1P59052 145 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 IGLV3-21P80748 117 aaPredicted RBP2.49□□□□□ -2.01
NEB-220ENST00000618972 C8orf31Q8N9H6 132 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 ROBO1Q9Y6N7 1651 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 A0A0J9YXY3 114 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 LYNX1G3V0Z9 82 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 LYNX1P0DP58 116 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 A0A087WX48 190 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 IGLV3-32A0A0A0MS00 114 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 PAX4O43316 350 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 C11orf1Q9H5F2 150 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 POLR3KQ9Y2Y1 108 aaPredicted RBP2.49□□□□□ -2.01
NEB-220ENST00000618972 SLC25A16P16260 332 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 MIR17HGQ75NE6 70 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 IGHV3OR16-8A0A075B7F1 116 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 SEC61GP60059 68 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 C18orf15Q96N68 181 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 FGF6P10767 208 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 PPIFP30405 207 aaKnown RBP2.49□□□□□ -2.01
NEB-220ENST00000618972 IGFL4Q6B9Z1 124 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 ZNF493Q6ZR52 646 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 TRPM7Q96QT4 1865 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 IGKV3D-11A0A0A0MRZ8 115 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 WT1P19544 449 aaPredicted RBP2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms